Gene
| Gene Model ID | habu1_s4223_g13687 |
|---|---|
| Locus | habu1_scaffold4223 : 35867 ... 57295 : - |
| To GenomeBrowser | habu1_scaffold4223:35867..57295 |
| Genes list of scaffold | habu1_scaffold4223 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| rna-binding protein 5 | GO:0000398 GO:0044822 GO:0046872 GO:0050794 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s4223_g13687.t2 | 2 | 1 | RRM_6 | 136 | 207 | 1.9e-27 | 95.0 | 8.9e-15 | 1.5e-11 | 44.1 |
| habu1_s4223_g13687.t2 | 2 | 1 | RRM_1 | 136 | 199 | 1.1e-13 | 50.6 | 1.2e-09 | 2.1e-06 | 27.2 |
| habu1_s4223_g13687.t2 | 1 | 1 | zf-RanBP | 217 | 245 | 1.2e-10 | 40.3 | 7.2e-14 | 1.2e-10 | 40.3 |
| habu1_s4223_g13687.t2 | 2 | 2 | RRM_6 | 269 | 344 | 1.9e-27 | 95.0 | 4.1e-16 | 6.7e-13 | 48.4 |
| habu1_s4223_g13687.t2 | 2 | 2 | RRM_1 | 272 | 331 | 1.1e-13 | 50.6 | 1.4e-07 | 0.00023 | 20.7 |
| habu1_s4223_g13687.t2 | 1 | 1 | RRM_5 | 285 | 349 | 1.3e-08 | 34.5 | 1.0e-06 | 0.0017 | 18.1 |
| habu1_s4223_g13687.t2 | 1 | 1 | G-patch | 775 | 819 | 8.2e-19 | 67.1 | 1.0e-21 | 1.7e-18 | 66.1 |
| habu1_s4223_g13687.t2 | 1 | 1 | G-patch_2 | 777 | 822 | 6.0e-08 | 32.4 | 3.7e-11 | 6.0e-08 | 32.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s4223_g13687.t2 | gi|543355780|ref|XP_005522200.1| | PREDICTED: RNA-binding protein 5 isoform X1 [Pseudopodoces humilis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 98.0 |
| Venom grand-1 | 222.7 |
| Pit, infrared sensing | 125.2 |
| Nose | 95.5 |
| Brain-1 | 109.4 |
| Eye | 132.7 |
| fetal fibroblast | 47.5 |
| venom gland-2 | 182.7 |
| Brain-2 | 96.2 |
| Spleen | 200.8 |
| Lung | 185.8 |
| Liver | 211.8 |
| Kidney | 130.3 |
| Pancreas | 230.0 |
| Small intestine | 195.2 |
| Large intestine | 189.3 |
| Stomach | 185.9 |
| heart | 175.9 |
| ovary | 60.9 |
| cheek muscle | 120.9 |
Transcript
| Transcript ID | habu1_s4223_g13687.t1 |
|---|---|
| Definition | - |
>habu1_s4223_g13687.t1 gaagcttctaggaggaggaggaggaggtagcagctgctgagaattgtgggtagaagacggtgagctcgacgccggcgcca ttttacagcccttcagagaaactgtggcgcttttgggttgtagttttgcggctgctgcggtggcagtgagtcgttattct cttcacgattgatattctaattaatcaagaattgaagacgagaggatgggttccgacaaacgcgtgagcagaactgaaag gagtggaagatatggatctattatagatagagaagatcgggatgaacgggactccagaagccgacgtcgggattctgact ataaaagatctagtgaggagcgtagaaacgacagatacgatgattatcgggattatgatagtcgggattatgatggccga gattatgatggtagagattatgacagccctgagagagagcatgaacgtgagcgacgtaatagcgataagtcagaagatgg ttatcattctgatggagactacggagaacatgattatagaaatgacataaatgatgaaaaagaaagcaagaccatcatgt tgcgtggactccctattactgttacagactatgatatacgagagatcattgaatcctgtgaaggccctcggcctgcagat gtgagattgatgaagagaaagacaggtgtaagccgtggtttcgccttcgtggagttttatcactttcaagatgctaccag ctggatggaagccaatcagaaaaaactgctggttcaagggaaacaaattgcaatgcattacagcaatcccagacctaaat ttgaagactggctttgtaacaagtgctgcctttacaacttcaggaggcgactaaaatgcttccgttgtggagcagataaa tttgattcagagcaggaagtgccacctggaggaccagaagctgttcagtctgtggattactactgtgacacccttattct gagaaatatagctcctcatacagtagtggaatcaatcatgacagctttgtcaccatatgcttcactggcagtaaataata tccgtcttattaaagacaaacagacccagcagaatagaggctttgcttttgtacagttgtcttcagccatggatgcttct cagctgttgcagattttgcagagtcttcagccacctctgaaaatagatggcaaaacaattggtgtggattttgcaaaaag tgctagaaaggatttgcttctcccagatggcaatcgtgtcagtgctttctctgttgctagcacagctattgctgctgctc agtggtcatcaacccagcctcagagtggagaaggtggctctgttgacttcaactaccttcaacttgggcaggatggttac aatcaatacacccaggattatcagcagttttaccagaatcaagcgggaacattggacacagatacaactacaacttctgg tggtccaagtactgctggtacaactacagctgctgttgtttcccagagtcctcagttatataatcaacagactacttcag ctgatacgccgacgcaggctgcacagccaagtactagttctcaagtttcatccacttctccaactggtataattcctggc accaagtatgccattccagacacttcaacatatcagtatgatgaatcatcaggtttctactatgatcctgtgactggatt atattatgacccaaattctcagtattattacaatgctgttacacaacagtatctgtactgggatggtgagaaagagacat acatgcctgcagcagaaggtacaacatatcagcaaactaacacatcttcagccaaagaaggaaaagaaaagaaagagaaa cccaagagtaaaactgctcaacaaattgctaaggacatggaacgttgggctaagagcttaaacaaacagaaggagaactt caagaacagctttcagcccctgaattcaagagaagaagaaagaagagaatctgcagcagcagatgctggttttgctctct ttgagaaaaagggcaccttgtctgagagacaacaaataataacagaagtgataaagaatggtgaagatgacaatccatta aaacgtggtttagttgctgcttacagtggggatagtgacaatgaggaagatttcttggagagattggagagtgaggaaga aaagttaacagattggaaaaagctagcatgtttgttatgtagaagacagtttcccaataaggaagctctcgttaggcatc agcagctttctgatcttcataagcaaaatatggatatttacaggagatctaggctatcagagcaagaacttgaagccttg gaaatgcgtgagagagagatgaaatacagagacagagcagctgaaagacgtgagaaatatggtatcccagagccaccaga accaaagcggaaaaaaacgtttgatgcaggcactgtgaattatgaacagcccacaaaagatggcattgaccatagcaata ttggcaacaaaatgctgcaggccatggggtggagagaaggttcaggattaggaaggaaatgccaaggcatcacagcccca attgaggcgcaagtgagaatgaggggagctgggcttggagcaaaaggtagttcttacggtgtttctacagctgactcata caaagatgccgtacggaaagctatgtttgcccgattcaccgaaatggaataagttttgtccatattggagacacaagatt ttactcttccaaactgactgttaaaacctcaaaggccttggaggcattgcagtatattagttgtgggttggaatcacttc tattttaatttttcttttccttccagcatgcattgcttcccttggtacatgatagatcatagaatgcaaagcactgtggc ttcatgttggaagaaccccaacaagttaaaaagaagatactgcacctttatacatttatgtaaatagtgtaaattaatgt gttgtgttcagagctttgtgtattctaaaaaccacttctgtcctgtggagcagttaaggaagtgttaatatgatttgaca ctgctattctctgcttactttgtattgttctcatttttggcagttccctgtacattttgtaagatatgtatttgtataga ttttttgaagattttgattctagatgccagtccagacttcttttgaaaagaaataaagcctaaaccaagcttgatttct |
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| Transcript ID | habu1_s4223_g13687.t2 |
| Definition | - |
>habu1_s4223_g13687.t2 gaagcttctaggaggaggaggaggaggtagcagctgctgagaattgtgggtagaagacggtgagctcgacgccggcgcca ttttacagcccttcagagaaactgtggcgcttttgggttgtagttttgcggctgctgcggtggcagtgagtcgttattct cttcacgattgatattctaattaatcaagaattgaagacgagaggatgggttccgacaaacgtccttgcatggatgttgc aattttcgagttgtttgactttacaaactctgtgtgcagcgtgagcagaactgaaaggagtggaagatatggatctatta tagatagagaagatcgggatgaacgggactccagaagccgacgtcgggattctgactataaaagatctagtgaggagcgt agaaacgacagatacgatgattatcgggattatgatagtcgggattatgatggccgagattatgatggtagagattatga cagccctgagagagagcatgaacgtgagcgacgtaatagcgataagtcagaagatggttatcattctgatggagactacg gagaacatgattatagaaatgacataaatgatgaaaaagaaagcaagaccatcatgttgcgtggactccctattactgtt acagactatgatatacgagagatcattgaatcctgtgaaggccctcggcctgcagatgtgagattgatgaagagaaagac aggtgtaagccgtggtttcgccttcgtggagttttatcactttcaagatgctaccagctggatggaagccaatcagaaaa aactgctggttcaagggaaacaaattgcaatgcattacagcaatcccagacctaaatttgaagactggctttgtaacaag tgctgcctttacaacttcaggaggcgactaaaatgcttccgttgtggagcagataaatttgattcagagcaggaagtgcc acctggaggaccagaagctgttcagtctgtggattactactgtgacacccttattctgagaaatatagctcctcatacag tagtggaatcaatcatgacagctttgtcaccatatgcttcactggcagtaaataatatccgtcttattaaagacaaacag acccagcagaatagaggctttgcttttgtacagttgtcttcagccatggatgcttctcagctgttgcagattttgcagag tcttcagccacctctgaaaatagatggcaaaacaattggtgtggattttgcaaaaagtgctagaaaggatttgcttctcc cagatggcaatcgtgtcagtgctttctctgttgctagcacagctattgctgctgctcagtggtcatcaacccagcctcag agtggagaaggtggctctgttgacttcaactaccttcaacttgggcaggatggttacaatcaatacacccaggattatca gcagttttaccagaatcaagcgggaacattggacacagatacaactacaacttctggtggtccaagtactgctggtacaa ctacagctgctgttgtttcccagagtcctcagttatataatcaacagactacttcagctgatacgccgacgcaggctgca cagccaagtactagttctcaagtttcatccacttctccaactggtataattcctggcaccaagtatgccattccagacac ttcaacatatcagtatgatgaatcatcaggtttctactatgatcctgtgactggattatattatgacccaaattctcagt attattacaatgctgttacacaacagtatctgtactgggatggtgagaaagagacatacatgcctgcagcagaaggtaca acatatcagcaaactaacacatcttcagccaaagaaggaaaagaaaagaaagagaaacccaagagtaaaactgctcaaca aattgctaaggacatggaacgttgggctaagagcttaaacaaacagaaggagaacttcaagaacagctttcagcccctga attcaagagaagaagaaagaagagaatctgcagcagcagatgctggttttgctctctttgagaaaaagggcaccttgtct gagagacaacaaataataacagaagtgataaagaatggtgaagatgacaatccattaaaacgtggtttagttgctgctta cagtggggatagtgacaatgaggaagatttcttggagagattggagagtgaggaagaaaagttaacagattggaaaaagc tagcatgtttgttatgtagaagacagtttcccaataaggaagctctcgttaggcatcagcagctttctgatcttcataag caaaatatggatatttacaggagatctaggctatcagagcaagaacttgaagccttggaaatgcgtgagagagagatgaa atacagagacagagcagctgaaagacgtgagaaatatggtatcccagagccaccagaaccaaagcggaaaaaaacgtttg atgcaggcactgtgaattatgaacagcccacaaaagatggcattgaccatagcaatattggcaacaaaatgctgcaggcc atggggtggagagaaggttcaggattaggaaggaaatgccaaggcatcacagccccaattgaggcgcaagtgagaatgag gggagctgggcttggagcaaaaggtagttcttacggtgtttctacagctgactcatacaaagatgccgtacggaaagcta tgtttgcccgattcaccgaaatggaataagttttgtccatattggagacacaagattttactcttccaaactgactgtta aaacctcaaaggccttggaggcattgcagtatattagttgtgggttggaatcacttctattttaatttttcttttccttc cagcatgcattgcttcccttggtacatgatagatcatagaatgcaaagcactgtggcttcatgttggaagaaccccaaca agttaaaaagaagatactgcacctttatacatttatgtaaatagtgtaaattaatgtgttgtgttcagagctttgtgtat tctaaaaaccacttctgtcctgtggagcagttaaggaagtgttaatatgatttgacactgctattctctgcttactttgt attgttctcatttttggcagttccctgtacattttgtaagatatgtatttgtatagattttttgaagattttgattctag atgccagtccagacttcttttgaaaagaaataaagcctaaaccaagcttgatttct |
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Protein
| Protein ID | habu1_s4223_g13687.t1 |
|---|---|
| Definition | - |
>habu1_s4223_g13687.t1 MGSDKRVSRTERSGRYGSIIDREDRDERDSRSRRRDSDYKRSSEERRNDRYDDYRDYDSRDYDGRDYDGRDYDSPEREHE RERRNSDKSEDGYHSDGDYGEHDYRNDINDEKESKTIMLRGLPITVTDYDIREIIESCEGPRPADVRLMKRKTGVSRGFA FVEFYHFQDATSWMEANQKKLLVQGKQIAMHYSNPRPKFEDWLCNKCCLYNFRRRLKCFRCGADKFDSEQEVPPGGPEAV QSVDYYCDTLILRNIAPHTVVESIMTALSPYASLAVNNIRLIKDKQTQQNRGFAFVQLSSAMDASQLLQILQSLQPPLKI DGKTIGVDFAKSARKDLLLPDGNRVSAFSVASTAIAAAQWSSTQPQSGEGGSVDFNYLQLGQDGYNQYTQDYQQFYQNQA GTLDTDTTTTSGGPSTAGTTTAAVVSQSPQLYNQQTTSADTPTQAAQPSTSSQVSSTSPTGIIPGTKYAIPDTSTYQYDE SSGFYYDPVTGLYYDPNSQYYYNAVTQQYLYWDGEKETYMPAAEGTTYQQTNTSSAKEGKEKKEKPKSKTAQQIAKDMER WAKSLNKQKENFKNSFQPLNSREEERRESAAADAGFALFEKKGTLSERQQIITEVIKNGEDDNPLKRGLVAAYSGDSDNE EDFLERLESEEEKLTDWKKLACLLCRRQFPNKEALVRHQQLSDLHKQNMDIYRRSRLSEQELEALEMREREMKYRDRAAE RREKYGIPEPPEPKRKKTFDAGTVNYEQPTKDGIDHSNIGNKMLQAMGWREGSGLGRKCQGITAPIEAQVRMRGAGLGAK GSSYGVSTADSYKDAVRKAMFARFTEME |
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| Protein ID | habu1_s4223_g13687.t2 |
| Definition | - |
>habu1_s4223_g13687.t2 MGSDKRPCMDVAIFELFDFTNSVCSVSRTERSGRYGSIIDREDRDERDSRSRRRDSDYKRSSEERRNDRYDDYRDYDSRD YDGRDYDGRDYDSPEREHERERRNSDKSEDGYHSDGDYGEHDYRNDINDEKESKTIMLRGLPITVTDYDIREIIESCEGP RPADVRLMKRKTGVSRGFAFVEFYHFQDATSWMEANQKKLLVQGKQIAMHYSNPRPKFEDWLCNKCCLYNFRRRLKCFRC GADKFDSEQEVPPGGPEAVQSVDYYCDTLILRNIAPHTVVESIMTALSPYASLAVNNIRLIKDKQTQQNRGFAFVQLSSA MDASQLLQILQSLQPPLKIDGKTIGVDFAKSARKDLLLPDGNRVSAFSVASTAIAAAQWSSTQPQSGEGGSVDFNYLQLG QDGYNQYTQDYQQFYQNQAGTLDTDTTTTSGGPSTAGTTTAAVVSQSPQLYNQQTTSADTPTQAAQPSTSSQVSSTSPTG IIPGTKYAIPDTSTYQYDESSGFYYDPVTGLYYDPNSQYYYNAVTQQYLYWDGEKETYMPAAEGTTYQQTNTSSAKEGKE KKEKPKSKTAQQIAKDMERWAKSLNKQKENFKNSFQPLNSREEERRESAAADAGFALFEKKGTLSERQQIITEVIKNGED DNPLKRGLVAAYSGDSDNEEDFLERLESEEEKLTDWKKLACLLCRRQFPNKEALVRHQQLSDLHKQNMDIYRRSRLSEQE LEALEMREREMKYRDRAAERREKYGIPEPPEPKRKKTFDAGTVNYEQPTKDGIDHSNIGNKMLQAMGWREGSGLGRKCQG ITAPIEAQVRMRGAGLGAKGSSYGVSTADSYKDAVRKAMFARFTEME |
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