Gene
| Gene Model ID | habu1_s4419_g14190 |
|---|---|
| Locus | habu1_scaffold4419 : 378955 ... 392615 : - |
| To GenomeBrowser | habu1_scaffold4419:378955..392615 |
| Genes list of scaffold | habu1_scaffold4419 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s4419_g14190.t1 | 1 | 1 | DM | 25 | 71 | 2.0e-24 | 84.8 | 4.1e-28 | 3.0e-24 | 84.2 |
| habu1_s4419_g14190.t1 | 1 | 1 | DMA | 178 | 216 | 1.2e-19 | 69.8 | 2.6e-23 | 1.9e-19 | 69.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s4419_g14190.t1 | gi|530610391|ref|XP_005296820.1| | PREDICTED: doublesex- and mab-3-related transcription factor 3 [Chrysemys picta bellii] | 0.0 |
| habu1_s4419_g14190.t1 | gi|564233936|ref|XP_006261329.1| | PREDICTED: duplex and mab-3 related transcription factor 3-like [Alligator mississippiensis] | 0.0 |
| habu1_s4419_g14190.t1 | gi|602633912|ref|XP_007423833.1| | PREDICTED: doublesex and mab-3 related transcription factor 3-like [Python bivittatus] | 0.0 |
| habu1_s4419_g14190.t1 | gi|557279301|ref|XP_006022690.1| | PREDICTED: duplex and mab-3 related transcription factor 3-like [Alligator sinensis] | 0.0 |
| habu1_s4419_g14190.t1 | gi|327263455|ref|XP_003216535.1| | PREDICTED: doublesex- and mab-3-related transcription factor 3 [Anolis carolinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.4 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.4 |
| Nose | 4.9 |
| Brain-1 | 0.0 |
| Eye | 0.1 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.1 |
| Spleen | 0.0 |
| Lung | 0.2 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.0 |
| Large intestine | 0.0 |
| Stomach | 0.0 |
| heart | 0.0 |
| ovary | 1.7 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s4419_g14190.t1 |
|---|---|
| Definition | - |
>habu1_s4419_g14190.t1 ggcggacttagcggctgcggtgagagggcgccatgaacggctacggctccccgtacctgtacatgggcggcccggtggct cagccggcccgggcgcccctgcagcggacgcccaagtgcgcgcgctgccgcaaccacggcgtgctctcctggctgaaggg ccacaagcgctactgccgcttcaaggactgcacctgcgagaagtgcatcctcatcatcgagcggcagcgcgtcatggccg cccagtggcataacaaagctgccctctgttttgtagacatgacagaagagcaactgggtgacgtcagtggaggagacagt actgaggcctacagtgacaaagatacagaccaaaggagttccccagaggtgaccaagaccaagagcaacttcactcctga gagccctgaaatagtttccgttgatgagggtggttatgcagtccagaaaaacagtgggagtactgacagcagacccgaaa gccctaagtatcaaccggagcagaaccatttcttgattgaaggtccatcagggacagtttctctgccatttggcttaaag gccaaccggccaccccttgaagtgttaaagaaaatattccctaaccaaaagccaaccgtgcttgagttaatcttgaaagg ctgtgggggtgacctggtgagtgctgttgaggtcctcctgtcaagcagatcctccatagggggaggagacagaacttctg cagaatcagaaggcctggttttgccttcaaatgggcacctctttgaacacacactgagctcctatcctatttcctcttca aaatggtcagtagggtctgcttttcgagtcccagacacactgaggttttctgctgatactagtaatgttgtaccaaatcc attggctgttccattacagcatcccttcccacaacctccccggtatccattaatgttgaggaatactttggcaaggaacc agtccagtccatttctacccaatgatgttactttgtggaacaccatgacccttcagcagcagtatcagctgaggtctcag tatgtcagccccttctctgctaattctgccacggtcttccgaagttctcctgtccttcccacacgcccatcagaggaccc tagaatctcacttcaagaggatggatgtccaattgtggcaaagcaacccatttatacggaagatgactatgatgaaagat ctgattcctcagattctagaatattaaacacatcttcgtaaaatgattatttaccgtgacatttttcaatgtggcagaaa tgctggacttccaacaaaagaaatggttggtcatatatctacaggaaaaaagggactctgcttgttactctctgttagca ataaagacataatttattttatttctt |
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Protein
| Protein ID | habu1_s4419_g14190.t1 |
|---|---|
| Definition | - |
>habu1_s4419_g14190.t1 MNGYGSPYLYMGGPVAQPARAPLQRTPKCARCRNHGVLSWLKGHKRYCRFKDCTCEKCILIIERQRVMAAQWHNKAALCF VDMTEEQLGDVSGGDSTEAYSDKDTDQRSSPEVTKTKSNFTPESPEIVSVDEGGYAVQKNSGSTDSRPESPKYQPEQNHF LIEGPSGTVSLPFGLKANRPPLEVLKKIFPNQKPTVLELILKGCGGDLVSAVEVLLSSRSSIGGGDRTSAESEGLVLPSN GHLFEHTLSSYPISSSKWSVGSAFRVPDTLRFSADTSNVVPNPLAVPLQHPFPQPPRYPLMLRNTLARNQSSPFLPNDVT LWNTMTLQQQYQLRSQYVSPFSANSATVFRSSPVLPTRPSEDPRISLQEDGCPIVAKQPIYTEDDYDERSDSSDSRILNT SS |
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