Gene
| Gene Model ID | habu1_s4508_g14338 |
|---|---|
| Locus | habu1_scaffold4508 : 120022 ... 135885 : - |
| To GenomeBrowser | habu1_scaffold4508:120022..135885 |
| Genes list of scaffold | habu1_scaffold4508 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s4508_g14338.t1 | 2 | 1 | LRR_4 | 49 | 89 | 2.7e-14 | 52.3 | 1.4e-09 | 2.9e-06 | 26.7 |
| habu1_s4508_g14338.t1 | 1 | 1 | LRR_9 | 85 | 159 | 8.4e-08 | 31.9 | 5.6e-08 | 0.00012 | 21.7 |
| habu1_s4508_g14338.t1 | 2 | 2 | LRR_4 | 94 | 132 | 2.7e-14 | 52.3 | 1.1e-09 | 2.4e-06 | 27.0 |
| habu1_s4508_g14338.t1 | 1 | 1 | LRR_8 | 94 | 152 | 8.6e-07 | 28.6 | 2.2e-06 | 0.0046 | 16.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s4508_g14338.t1 | gi|327259513|ref|XP_003214581.1| | PREDICTED: dynein light chain 1, axonemal [Anolis carolinensis] | 0.0 |
| habu1_s4508_g14338.t1 | gi|558187347|ref|XP_006128667.1| | PREDICTED: dynein light chain 1, axonemal isoform X1 [Pelodiscus sinensis] | 0.0 |
| habu1_s4508_g14338.t1 | gi|530581693|ref|XP_005284708.1| | PREDICTED: dynein light chain 1, axonemal isoform X1 [Chrysemys picta bellii] | 0.0 |
| habu1_s4508_g14338.t1 | gi|564267622|ref|XP_006272616.1| | PREDICTED: dynein light chain 1, axonemal [Alligator mississippiensis] | 0.0 |
| habu1_s4508_g14338.t1 | gi|557320983|ref|XP_006033616.1| | PREDICTED: dynein light chain 1, axonemal [Alligator sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 5.7 |
| Venom grand-1 | 1.7 |
| Pit, infrared sensing | 4.9 |
| Nose | 7.0 |
| Brain-1 | 10.7 |
| Eye | 5.2 |
| fetal fibroblast | 5.6 |
| venom gland-2 | 1.1 |
| Brain-2 | 9.4 |
| Spleen | 2.6 |
| Lung | 1.9 |
| Liver | 0.9 |
| Kidney | 2.4 |
| Pancreas | 0.7 |
| Small intestine | 0.7 |
| Large intestine | 1.3 |
| Stomach | 1.6 |
| heart | 5.6 |
| ovary | 33.1 |
| cheek muscle | 6.6 |
Transcript
| Transcript ID | habu1_s4508_g14338.t1 |
|---|---|
| Definition | - |
>habu1_s4508_g14338.t1 cgcgtcccaatcttcccctgctgaagaacaaaaccatggaaatcaacgctcgtttagcaatatgaccttttttccccctc ccggcctctagggggagactccctgaatgaaaagtccccctgttttcagagggatctctatgatccggttgctgcttttg cttttgctcacgtgtctgtcccctttcccagctttcaggtgagcatgcgcgtggatttcgcttgccatagcaaccagggc tggagacggtagcaactggaatcctaacaatggcagggtgctcatttgaagagtgatctgcataattaatgcaaattgta agggttgtctgaatatcggaagtcaccttcagtagaatggcaaaagcaacaactatcaaggaagctctagccaaatggga agaaaaaactggtcagaagccatcggaggccaaggaagtgaaactctatgctcagattccccctatagaaaagatggatg cttctctttccactcttgttaactgcgaaaaattgtctttatctacaaactgcattgaaaaaattgccaacttaaatggg ctaaaaaacttgcggatattgtcattgggaaggaacaacataaaaaatctgaatgggctggaagcagttggggatacatt agaggagttgtggatctcatacaacttggttgagaagttgaaaggtctccatgtgatgaagaagctgaagattctctaca tgtccaataatctggtgaaagattgggcagagtttgtgaggttggcagagttgccgttactggaggacctggtgttcgtg ggcaatccactggaagagaaatactctgctgattcacagagcgcctgggttgaggaggcaaccaagcgagtgcccaaact gaagaaactcgatggtatcccggttataaaacaggaagaaggtgaagaaggagaaaactagcatcttttctttgacatta aattattgatgtatctccagcactgtataggatgtgatgcttttgtataaatatgtctttaaagaaaaatgta |
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Protein
| Protein ID | habu1_s4508_g14338.t1 |
|---|---|
| Definition | - |
>habu1_s4508_g14338.t1 MAKATTIKEALAKWEEKTGQKPSEAKEVKLYAQIPPIEKMDASLSTLVNCEKLSLSTNCIEKIANLNGLKNLRILSLGRN NIKNLNGLEAVGDTLEELWISYNLVEKLKGLHVMKKLKILYMSNNLVKDWAEFVRLAELPLLEDLVFVGNPLEEKYSADS QSAWVEEATKRVPKLKKLDGIPVIKQEEGEEGEN |
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