Gene
| Gene Model ID | habu1_s4508_g14345 |
|---|---|
| Locus | habu1_scaffold4508 : 469432 ... 491901 : + |
| To GenomeBrowser | habu1_scaffold4508:469432..491901 |
| Genes list of scaffold | habu1_scaffold4508 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| zinc finger fyve domain-containing protein 1 isoform x1 | GO:0000407 GO:0003924 GO:0005525 GO:0005545 GO:0005547 GO:0005776 GO:0005795 GO:0008270 GO:0010923 GO:0043325 GO:0044233 GO:0048471 GO:0097629 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s4508_g14345.t1 | 1 | 1 | GBP | 167 | 271 | 6.2e-06 | 25.4 | 3.4e-09 | 1.0e-05 | 24.7 |
| habu1_s4508_g14345.t1 | 2 | 1 | FYVE | 599 | 662 | 2.2e-30 | 104.3 | 3.9e-19 | 1.2e-15 | 57.1 |
| habu1_s4508_g14345.t1 | 2 | 2 | FYVE | 716 | 778 | 2.2e-30 | 104.3 | 1.3e-20 | 3.8e-17 | 61.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s4508_g14345.t1 | gi|602642744|ref|XP_007428157.1| | PREDICTED: zinc finger FYVE domain-containing protein 1 isoform X2 [Python bivittatus] | 0.0 |
| habu1_s4508_g14345.t1 | gi|602642742|ref|XP_007428156.1| | PREDICTED: zinc finger FYVE domain-containing protein 1 isoform X1 [Python bivittatus] | 0.0 |
| habu1_s4508_g14345.t1 | gi|327259491|ref|XP_003214570.1| | PREDICTED: zinc finger FYVE domain-containing protein 1 isoform X2 [Anolis carolinensis] | 0.0 |
| habu1_s4508_g14345.t1 | gi|637244348|ref|XP_008102087.1| | PREDICTED: zinc finger FYVE domain-containing protein 1 isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s4508_g14345.t1 | gi|564267637|ref|XP_006272623.1| | PREDICTED: zinc finger FYVE domain-containing protein 1 [Alligator mississippiensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 10.4 |
| Venom grand-1 | 7.0 |
| Pit, infrared sensing | 6.2 |
| Nose | 5.4 |
| Brain-1 | 5.3 |
| Eye | 5.2 |
| fetal fibroblast | 4.9 |
| venom gland-2 | 3.5 |
| Brain-2 | 5.1 |
| Spleen | 6.1 |
| Lung | 8.3 |
| Liver | 16.1 |
| Kidney | 7.0 |
| Pancreas | 5.1 |
| Small intestine | 7.4 |
| Large intestine | 8.5 |
| Stomach | 5.3 |
| heart | 9.7 |
| ovary | 10.7 |
| cheek muscle | 9.2 |
Transcript
| Transcript ID | habu1_s4508_g14345.t1 |
|---|---|
| Definition | - |
>habu1_s4508_g14345.t1 agtcaagatcttctcgtggtagcgaataagtactaattttagtcctttggcaaaccaatgtatgtatctgataaaaagac ccagttttataaagtaataatttgtggaagatgagtgcccaacctccatctgtagataaaggactgaataccacactttt gtgtcaggaaagctatgcttgcagtggcacagatgaagcagtctttgaatgtgacgaatgtggaagcttgcagtgtcagc gttgcgaagaagaactgcatagacaagaaagacttcgaaatcacgaacggactcgaatcaaacctggccatgtcccctac tgtgacagctgcaaagtcacaagtggcagcatcctgcagaacaatatcataagctctagacaaagggcaaccgtaaggtg ccaagcgtgcaaaataaacttatgtttagagtgtcagaagagaactcatgctgggggaaataagaggaaacatcccatta ccgtataccatagtggcagacatcatgagcagcaagaggaggaaggaatggatgaggagaccaagaggaagaagatgaca gaacatgtgataagcttcctgctggtggatgaaacagaggagattcaggtggagaatgaagaagaatttatcaggaaact gaactgcaaggctgaccaacacgtaaaggtggtgtctatttttggaaacaccggggatgggaaatctcatacccttaacc acaccttcttttatggccgtgaagtctttaaaacgtctccagcacaggagtcttgtacagtaggtgtttgggctgcctat gaccctgttcataaaatggtagtgattgacacagagggtcttcttggtgccatggagaatctaagtcagaggacccggct gcttctgaaggtcttggctatttcagatctcatcatctaccgcacacatgctgacagactccacaatgatctcttcaaat ttcttggagatgcttcggaagcatacctaaaacacttcaccaaagaactgaaagcaaccacagcccgttgtggactggat gttccattgtccactttgggtcctggagtcattatctttcatgaaactgtgtacacacagttattgggtgctgataatcc ttctgaggtgcctgagaaattaattcaggatcgattccgcaaacttggtctcttcccggaatccttcagctcaatccatt acaaaggaataaggacacaaaacccgccaacagatttttctagcctcaggcatgctatggagcagcagctagaaaataat accacccgttctccacgtcctcctggagttatctacaaagcactcaaagcattaagtgatcggttctgtggtgaaattcc agatgatcaaatggctcatagctccttctttccagatgagtattttacctgctcctctgtatgtcttagctgcggaaatg ggtgtaagaagagcatgaaccatgcgaaagaaggaatcccccacgaagctaagaatcgctgtagatacactcatcagtac gataatcgagtattcacttgcaagggctgttatgaacatggtcaagaggttagggtagtgcccaaaacttctgcttctac agattccccttggatgggccttgctaagtatgcctggtcaggatatgtaattgagtgccccaattgtggagttgtgtacc gtagccgacaatattggtttgggaaccaagatcctgtggatactgtggtgaggacggagattgtacacgtctggccagga actgattgcagcctgaaggacaacaacaatgctgctcaacgcctgatcgatggaatgaatttcatggcacagtcagtgtc tgaactcagcttgggacctaccaaagccgtaacctcatggctgacagatcaaattgctccggcttactggaaacccaatt cccagattctgaattgtaggaaatgtggcatatcttttaaagataatgataccaagcaccattgtcgggcttgtggagaa ggtttctgtgatggttgttcgtccaagactcgccctgtcccggaacgtggttggggacccacacctgtgcgagtatgcga caactgttatgacaacagggactttcagttagaagtggctgaggtatcaacggatgaggaaggagggacagtgattgcca ggaaggttggtgaagctgtgcagaataccctcggggctgtggtaaccgccattgacatcccactgggtctcatgaaggat gccgctaggcctgcctactgggtacctgaccacgaaatcttacactgccacaattgccggaaggaattcaacatcaaatt gtcaaagcatcactgtcgtgcttgcggccagggcttctgtgatgaatgctcccatgagcgcagagctgtcccttcccgtg gttgggatcatccagttagagtctgttttaattgcaataaaaagcctggtgatctttaaccctaactttccttctgggac aggtactgcaatacggttgcagagaattatccaaataaattgcttttgtataaatggatca |
|
Protein
| Protein ID | habu1_s4508_g14345.t1 |
|---|---|
| Definition | - |
>habu1_s4508_g14345.t1 MSAQPPSVDKGLNTTLLCQESYACSGTDEAVFECDECGSLQCQRCEEELHRQERLRNHERTRIKPGHVPYCDSCKVTSGS ILQNNIISSRQRATVRCQACKINLCLECQKRTHAGGNKRKHPITVYHSGRHHEQQEEEGMDEETKRKKMTEHVISFLLVD ETEEIQVENEEEFIRKLNCKADQHVKVVSIFGNTGDGKSHTLNHTFFYGREVFKTSPAQESCTVGVWAAYDPVHKMVVID TEGLLGAMENLSQRTRLLLKVLAISDLIIYRTHADRLHNDLFKFLGDASEAYLKHFTKELKATTARCGLDVPLSTLGPGV IIFHETVYTQLLGADNPSEVPEKLIQDRFRKLGLFPESFSSIHYKGIRTQNPPTDFSSLRHAMEQQLENNTTRSPRPPGV IYKALKALSDRFCGEIPDDQMAHSSFFPDEYFTCSSVCLSCGNGCKKSMNHAKEGIPHEAKNRCRYTHQYDNRVFTCKGC YEHGQEVRVVPKTSASTDSPWMGLAKYAWSGYVIECPNCGVVYRSRQYWFGNQDPVDTVVRTEIVHVWPGTDCSLKDNNN AAQRLIDGMNFMAQSVSELSLGPTKAVTSWLTDQIAPAYWKPNSQILNCRKCGISFKDNDTKHHCRACGEGFCDGCSSKT RPVPERGWGPTPVRVCDNCYDNRDFQLEVAEVSTDEEGGTVIARKVGEAVQNTLGAVVTAIDIPLGLMKDAARPAYWVPD HEILHCHNCRKEFNIKLSKHHCRACGQGFCDECSHERRAVPSRGWDHPVRVCFNCNKKPGDL |
|