Gene
| Gene Model ID | habu1_s4508_g14348 |
|---|---|
| Locus | habu1_scaffold4508 : 750582 ... 760745 : + |
| To GenomeBrowser | habu1_scaffold4508:750582..760745 |
| Genes list of scaffold | habu1_scaffold4508 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| zinc finger protein dpf3-like | GO:0007399 GO:0008270 GO:0071565 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s4508_g14348.t1 | 1 | 1 | PHD | 18 | 64 | 3.9e-14 | 52.0 | 2.7e-17 | 4.4e-14 | 51.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s4508_g14348.t1 | gi|637244330|ref|XP_008102048.1| | PREDICTED: zinc finger protein DPF3 isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s4508_g14348.t1 | gi|678009744|ref|XP_009080634.1| | PREDICTED: zinc finger protein DPF3-like [Acanthisitta chloris] | 0.0 |
| habu1_s4508_g14348.t1 | gi|542141810|ref|XP_005480018.1| | PREDICTED: zinc finger protein DPF3 isoform X2 [Zonotrichia albicollis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.1 |
| Venom grand-1 | 0.2 |
| Pit, infrared sensing | 0.3 |
| Nose | 0.4 |
| Brain-1 | 0.4 |
| Eye | 0.6 |
| fetal fibroblast | 0.1 |
| venom gland-2 | 0.3 |
| Brain-2 | 0.4 |
| Spleen | 0.7 |
| Lung | 0.6 |
| Liver | 2.0 |
| Kidney | 0.2 |
| Pancreas | 1.3 |
| Small intestine | 0.3 |
| Large intestine | 0.4 |
| Stomach | 0.8 |
| heart | 1.0 |
| ovary | 0.1 |
| cheek muscle | 0.5 |
Transcript
| Transcript ID | habu1_s4508_g14348.t1 |
|---|---|
| Definition | - |
>habu1_s4508_g14348.t1 tcgcaactttttttttttgcattgccggagctggggtgggcacggcctttgcatgatgcaaccagcccgcggactggcag tttgacacccctgaactagagttaaaatcacaaatacaaactaatatcatctaatagtacttaatacctctaaaaacctc taaaaattaaagcaattagtttgtgtgggatcccttcagataccaaatgacatgccctcttgatatgtaatcagattata ttgatattcagagtagtgaagaaggtagaactgtggtgatgttgaagaaaaaattgtaatgtagggtgaaatctgtagtg agatatgtaatatcctttcccctcttcatagtgagccagcagatgggatttaaatgctacaccatgggataggtatttta caaagactggttgtgagcagtcctcacaggatcaagttggtggtcacccaacgtgcttgcagttcacagcaaatatgaca gaggctgtcaaaacctatcagtggcaatgcatcgaatgcaaatcctgtagcctctgtgggacttctgagaatgatgacca gttgctcttctgtgatgactgtgaccgtggttaccatatgtattgcttaaatccaccagtctctgaacccccagaaggaa gctggagttgtcacttgtgtcaagaactactccaggagagagcatcagctttctgctaccagccctagatgagaataaag gattgggcttattcttgaatc |
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Protein
| Protein ID | habu1_s4508_g14348.t1 |
|---|---|
| Definition | - |
>habu1_s4508_g14348.t1 MTEAVKTYQWQCIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLNPPVSEPPEGSWSCHLCQELLQERASAFCYQP |
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