Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s4508_g14349
Locus habu1_scaffold4508 : 797529 ... 1071218 : -
To GenomeBrowser habu1_scaffold4508:797529..1071218
Genes list of scaffold habu1_scaffold4508

Annotation by Blast2GO
Annotation GO
regulator of g-protein signaling 6 GO:0004871 GO:0005834 GO:0035556 GO:0038032

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s4508_g14349.t4 1 1 RVT_1 58 124 7.8e-06 25.3 7.5e-09 1.8e-05 24.1
habu1_s4508_g14349.t4 1 1 DEP 226 285 7.2e-11 41.6 2.0e-13 5.0e-10 38.9
habu1_s4508_g14349.t4 1 1 G-gamma 428 491 2.2e-14 52.9 2.2e-17 5.5e-14 51.6
habu1_s4508_g14349.t4 1 1 RGS 508 622 7.6e-33 113.1 8.2e-36 2.0e-32 111.7

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 1.4
Venom grand-1 0.5
Pit, infrared sensing 0.6
Nose 1.7
Brain-1 6.1
Eye 1.5
fetal fibroblast 0.6
venom gland-2 0.2
Brain-2 9.3
Spleen 0.7
Lung 2.2
Liver 0.4
Kidney 1.0
Pancreas 0.9
Small intestine 2.5
Large intestine 6.0
Stomach 2.1
heart 45.9
ovary 1.0
cheek muscle 0.6

Transcript
Transcript IDhabu1_s4508_g14349.t1
Definition-
>habu1_s4508_g14349.t1
agtcgaggactaaaccggtcttaagtcgaggactacccaaccagtcgtaagtcgaggactttccctgcccgggagcgccg
cgcatgcgtggttccaccccctgcgccggccgaggcatagctggcaagcggcagagacggagcaggccgaccaccagctg
gcccagcccaagggagagtttctatttgcaggtctttggttttgtgatcttctccagttctgtttcttctactctgctgt
ctccaggttttgtcccagtgctcttcaacatcttcatcaatgatttggatgaggggatagatggggaactcatcaaattt
gcggatgacaccaagctggcaggaatagccaacactccagaagacagacttaagatacaggaggacctggacagacttga
acactgggcgctatctaacaaaatgaaattcaatggtgaaaaaacctgtttgggaagaggtgtgttcatcatggcccaag
gatccagtgagatggatactgctgagcaagaggacagttctccaaatatgattgtttaccgaaagatagaagatatcata
acaagaatgcaggatgacaaaacaggtggagtgcccattcgcacggtcaagagctttctgtcgaaaatccctagtgttgt
cacaggagctgacatagtacagtggcttatgaagaatctcagtattgaagatctagctgaatcaatacatatgggaagtc
tcattgcagcacaaggatatatttttccaatttccgatcacgtgctgactttaaaggatgatgggactttttatcggttt
caagctccatacttctggccatcaaattgttgggaaccagaaaacacagactatgccatctatctttgcaagaggaccat
gcagaataaagctagactggaactggcagattatgaagcagagaacttagcaagacttcagagagcttttgccagaaagt
gggaattcatctttatgcaagctgaagcacaagtcaaaattgacagaaaaaaggataagacagaaaggaagattctggat
agtcaagaaagagctttctgggatgttcataggccagtgccgggctgtgtgaatacaacagagatggacatcagaaaatg
tcggcgaatgaagaatccacagagggtcaaaaagtcagtttatggagttacagaagacagtcagtcccaaagtcctgcac
atataccttcccagccaattcgcaaaacaacaaaagatgacgtccgaaagcaaatatcatttctgaacgttcagatagac
aggcattgtttaaaaatgtctaaagtagcagaaagtttaattgcttattcagagcagtacactgattatgatccctttat
aactcctgcggaaccttccaatccctggataaatgatgacagtgtgttttgggacttagaaacaagcaaagagccttcgc
agcatcgggtcaagagatggggcttctctatagatgaggtgttgaaagatcctgtggggcgtgaccagtttcttcgattt
ttggaatcagaattcagttctgaaaacctcaggttttggctggctgtccaggatctcaaaaaacaaacgttgcaagatgt
tgcgacccgagtagaagacatctggcaggagttccttgctcccggggcccagagtgccatcaacctggactctcacagct
atgaaataacaagccaaaacgtcaaagaccccgggaggtacacatatgaagatgcacaggaacatatttacaagctgatg
aagagtgacagctatgcacgtttcctccgttccaatgcttaccaagacttgttgctggcaaagaagaagggaaagtcatt
ggcaggcaagcgtctcacaggcttgatgcaatcttcttgacagcatcgtctgggctagcagttgctgacatctccgaaag
accgctgcactccacctcctcctcggccaaggaaagacattgtgggggggcataggggtcactccgaggggcgggggggt
gtagacgagagagcaaaggagagagagcaccttcagacaatggaagaaacatagggagggaaaagacgccgggatggaga
ctctgacccactggaggttcctctttctgtagtttacatcaacacttttcttatactgctttataatggcactgaggtct
ccaacgataagactctgtttctaatttgatttcagaggaacaccaatgctgtctaaaggaagcagagaaagagagcgaga
aagggctaacagtgttattttacgtcgatcctaagagaaatttaaggaaaggacaactggttcggatcagtcttcataac
gcaggcgctttctcccactctttgctgctgctgctgctgctgcatgtgcgcagctgtctctatgtctttcacatatctag
gtaggactaacatttcattctgctgagcagtagattaatagtaaactctagcttcacattaatggctcagatttggcatc
ctttccaaagccagaagatttcactttgtctgaaggaagtgtcacgtgatgaaaaaggttgccaccctagcgcttaaatg
aagattaaaaacataatctaagtaattggaaggagcacccaaatgatctttcctccacagccacctgcaaatttactata
gatgtcatttgtcttctaactgtctaggtccaataaaataaccactagaatttgcttag
Transcript IDhabu1_s4508_g14349.t2
Definition-
>habu1_s4508_g14349.t2
agtcgaggactaaaccggtcttaagtcgaggactacccaaccagtcgtaagtcgaggactttccctgcccgggagcgccg
cgcatgcgtggttccaccccctgcgccggccgaggcatagctggcaagcggcagagacggagcaggccgaccaccagctg
gcccagcccaagggagagtttctatttgcaggtctttggttttgtgatcttctccagttctgtttcttctactctgctgt
ctccaggttttgtcccagtgctcttcaacatcttcatcaatgatttggatgaggggatagatggggaactcatcaaattt
gcggatgacaccaagctggcaggaatagccaacactccagaagacagacttaagatacaggaggacctggacagacttga
acactgggcgctatctaacaaaatgaaattcaatggtgaaaaaacctgtttgggaagaggtgtgttcatcatggcccaag
gatccagtgagatggatactgctgagcaagaggacagttctccaaatatgattgtttaccgaaagatagaagatatcata
acaagaatgcaggatgacaaaacaggtggagtgcccattcgcacggtcaagagctttctgtcgaaaatccctagtgttgt
cacaggagctgacatagtacagtggcttatgaagaatctcagtattgaagatctagctgaatcaatacatatgggaagtc
tcattgcagcacaaggatatatttttccaatttccgatcacgtgctgactttaaaggatgatgggactttttatcggttt
caagctccatacttctggccatcaaattgttgggaaccagaaaacacagactatgccatctatctttgcaagaggaccat
gcagaataaagctagactggaactggcagattatgaagcagagaacttagcaagacttcagagagcttttgccagaaagt
gggaattcatctttatgcaagctgaagcacaagtcaaaattgacagaaaaaaggataagacagaaaggaagattctggat
agtcaagaaagagctttctgggatgttcataggccagtgccgggctgtgtgaatacaacagagatggacatcagaaaatg
tcggcgaatgaagaatccacagagggtcaaaaagtcagtttatggagttacagaagacagtcagtcccaaagtcctgcac
atataccttcccagccaattcgcaaaacaacaaaagatgacgtccgaaagcaaatatcatttctgaacgttcagatagac
aggcattgtttaaaaatgtctaaagtagcagaaagtttaattgcttattcagagcagtacactgattatgatccctttat
aactcctgcggaaccttccaatccctggataaatgatgacagtgtgttttgggacttagaaacaagcaaagagccttcgc
agcatcgggtcaagagatggggcttctctatagatgaggtgttgaaagatcctgtggggcgtgaccagtttcttcgattt
ttggaatcagaattcagttctgaaaacctcaggttttggctggctgtccaggatctcaaaaaacaaacgttgcaagatgt
tgcgacccgagtagaagacatctggcaggagttccttgctcccggggcccagagtgccatcaacctggactctcacagct
atgaaataacaagccaaaacgtcaaagaccccgggaggtacacatatgaagatgcacaggaacatatttacaagctgatg
aagagtgacagctatgcacgtttcctccgttccaatgcttaccaagacttgttgctggcaaagaagaagcccgagaacga
gcaagctcgtagaacttccttagaaaagttcactcgcagtatgggaaagtcattggcaggcaagcgtctcacaggcttga
tgcaatcttcttgacagcatcgtctgggctagcagttgctgacatctccgaaagaccgctgcactccacctcctcctcgg
ccaaggaaagacattgtgggggggcataggggtcactccgaggggcgggggggtgtagacgagagagcaaaggagagaga
gcaccttcagacaatggaagaaacatagggagggaaaagacgccgggatggagactctgacccactggaggttcctcttt
ctgtagtttacatcaacacttttcttatactgctttataatggcactgaggtctccaacgataagactctgtttctaatt
tgatttcagaggaacaccaatgctgtctaaaggaagcagagaaagagagcgagaaagggctaacagtgttattttacgtc
gatcctaagagaaatttaaggaaaggacaactggttcggatcagtcttcataacgcaggcgctttctcccactctttgct
gctgctgctgctgctgcatgtgcgcagctgtctctatgtctttcacatatctaggtaggactaacatttcattctgctga
gcagtagattaatagtaaactctagcttcacattaatggctcagatttggcatcctttccaaagccagaagatttcactt
tgtctgaaggaagtgtcacgtgatgaaaaaggttgccaccctagcgcttaaatgaagattaaaaacataatctaagtaat
tggaaggagcacccaaatgatctttcctccacagccacctgcaaatttactatagatgtcatttgtcttctaactgtcta
ggtccaataaaataaccactagaatttgcttag
Transcript IDhabu1_s4508_g14349.t3
Definition-
>habu1_s4508_g14349.t3
agtcgaggactaaaccggtcttaagtcgaggactacccaaccagtcgtaagtcgaggactttccctgcccgggagcgccg
cgcatgcgtggttccaccccctgcgccggccgaggcatagctggcaagcggcagagacggagcaggccgaccaccagctg
gcccagcccaagggagagtttctatttgcaggtctttggttttgtgatcttctccagttctgtttcttctactctgctgt
ctccaggttttgtcccagtgctcttcaacatcttcatcaatgatttggatgaggggatagatggggaactcatcaaattt
gcggatgacaccaagctggcaggaatagccaacactccagaagacagacttaagatacaggaggacctggacagacttga
acactgggcgctatctaacaaaatgaaattcaatggtgaaaaaacctgtttgggaagaggtgtgttcatcatggcccaag
gatccagtgagatggatactgctgagcaagaggacagttctccaaatatgattgtttaccgaaagatagaagatatcata
acaagaatgcaggatgacaaaacaggtggagtgcccattcgcacggtcaagagctttctgtcgaaaatccctagtgttgt
cacaggagctgacatagtacagtggcttatgaagaatctcagtattgaagatctagctgaatcaatacatatgggaagtc
tcattgcagcacaaggatatatttttccaatttccgatcacgtgctgactttaaaggatgatgggactttttatcggttt
caagctccatacttctggccatcaaattgttgggaaccagaaaacacagactatgccatctatctttgcaagaggaccat
gcagaataaagctagactggaactggcagattatgaagcagagaacttagcaagacttcagagagcttttgccagaaagt
gggaattcatctttatgcaagctgaagcacaagtcaaaattgacagaaaaaaggataagacagaaaggaagattctggat
agtcaagaaagagctttctgggatgttcataggccagtgccgggctgtgtgaatacaacagagatggacatcagaaaatg
tcggcgaatgaagaatccacagagggtcaaaaagtcagtttatggagttacagaagacagtcagtcccaaagtcctgcac
atataccttcccagccaattcgcaaaacaacaaaagatgacgtccgaaagcaaatatcatttctgaacgttcagatagac
aggcattgtttaaaaatgtctaaagtagcagaaagtttaattgcttattcagagcagtacactgattatgatccctttat
aactcctgcggaaccttccaatccctggataaatgatgacagtgtgttttgggacttagaaacaagcaaagagccttcgc
agcatcgggtcaagagatggggcttctctatagatgaggtgttgaaagatcctgtggggcgtgaccagtttcttcgattt
ttggaatcagaattcagttctgaaaacctcaggttttggctggctgtccaggatctcaaaaaacaaacgttgcaagatgt
tgcgacccgagtagaagacatctggcaggagttccttgctcccggggcccagagtgccatcaacctggactctcacagct
atgaaataacaagccaaaacgtcaaagaccccgggaggtacacatatgaagatgcacaggaacatatttacaagctgatg
aagagtgacagctatgcacgtttcctccgttccaatgcttaccaagacttgttgctggcaaagaagaagcccgagaacga
gcaagctcgtagaacttccttagaaaagttcactcgcagtatgaaaaagagggtgggatcatttgggtccagaagaaggc
aggggccctgtgaaggatcagatttctgtttatttccatagcatcagtacatgatgtattgtggattcttctactaatca
acattaaactttttttcctccgtttatattactcttcatgtgtcttcaacatgtatcttttctttctttttcttctaatt
ctaataaaagaccattttaaaaggatatgg
Transcript IDhabu1_s4508_g14349.t4
Definition-
>habu1_s4508_g14349.t4
agtcgaggactaaaccggtcttaagtcgaggactacccaaccagtcgtaagtcgaggactttccctgcccgggagcgccg
cgcatgcgtggttccaccccctgcgccggccgaggcatagctggcaagcggcagagacggagcaggccgaccaccagctg
gcccagcccaagggagagtttctatttgcaggtctttggttttgtgatcttctccagttctgtttcttctactctgctgt
ctccaggttttgtcccagtgctcttcaacatcttcatcaatgatttggatgaggggatagatggggaactcatcaaattt
gcggatgacaccaagctggcaggaatagccaacactccagaagacagacttaagatacaggaggacctggacagacttga
acactgggcgctatctaacaaaatgaaattcaatggtgaaaaaacctgtttgggaagaggtgtgttcatcatggcccaag
gatccagtgagatggatactgctgagcaagaggacagttctccaaatatgattgtttaccgaaagatagaagatatcata
acaagaatgcaggatgacaaaacaggtggagtgcccattcgcacggtcaagagctttctgtcgaaaatccctagtgttgt
cacagctagtcagcactgttttttaggagaaaataagaaagacaataagatgcttgagagggaaaatcatccagccaatg
tacatgcctctgttcaaagacaggcttgccagattgggaaaatgaagtcatccttcctagaaggagctgacatagtacag
tggcttatgaagaatctcagtattgaagatctagctgaatcaatacatatgggaagtctcattgcagcacaaggatatat
ttttccaatttccgatcacgtgctgactttaaaggatgatgggactttttatcggtttcaagctccatacttctggccat
caaattgttgggaaccagaaaacacagactatgccatctatctttgcaagaggaccatgcagaataaagctagactggaa
ctggcagattatgaagcagagaacttagcaagacttcagagagcttttgccagaaagtgggaattcatctttatgcaagc
tgaagcacaagtcaaaattgacagaaaaaaggataagacagaaaggaagattctggatagtcaagaaagagctttctggg
atgttcataggccagtgccgggctgtgtgaatacaacagagatggacatcagaaaatgtcggcgaatgaagaatccacag
agggtcaaaaagtcagtttatggagttacagaagacagtcagtcccaaagtcctgcacatataccttcccagccaattcg
caaaacaacaaaagatgacgtccgaaagcaaatatcatttctgaacgttcagatagacaggcattgtttaaaaatgtcta
aagtagcagaaagtttaattgcttattcagagcagtacactgattatgatccctttataactcctgcggaaccttccaat
ccctggataaatgatgacagtgtgttttgggacttagaaacaagcaaagagccttcgcagcatcgggtcaagagatgggg
cttctctatagatgaggtgttgaaagatcctgtggggcgtgaccagtttcttcgatttttggaatcagaattcagttctg
aaaacctcaggttttggctggctgtccaggatctcaaaaaacaaacgttgcaagatgttgcgacccgagtagaagacatc
tggcaggagttccttgctcccggggcccagagtgccatcaacctggactctcacagctatgaaataacaagccaaaacgt
caaagaccccgggaggtacacatatgaagatgcacaggaacatatttacaagctgatgaagagtgacagctatgcacgtt
tcctccgttccaatgcttaccaagacttgttgctggcaaagaagaagcccgagaacgagcaagctcgtagaacttcctta
gaaaagttcactcgcagtatgggaaagtcattggcaggcaagcgtctcacaggcttgatgcaatcttcttgacagcatcg
tctgggctagcagttgctgacatctccgaaagaccgctgcactccacctcctcctcggccaaggaaagacattgtggggg
ggcataggggtcactccgaggggcgggggggtgtagacgagagagcaaaggagagagagcaccttcagacaatggaagaa
acatagggagggaaaagacgccgggatggagactctgacccactggaggttcctctttctgtagtttacatcaacacttt
tcttatactgctttataatggcactgaggtctccaacgataagactctgtttctaatttgatttcagaggaacaccaatg
ctgtctaaaggaagcagagaaagagagcgagaaagggctaacagtgttattttacgtcgatcctaagagaaatttaagga
aaggacaactggttcggatcagtcttcataacgcaggcgctttctcccactctttgctgctgctgctgctgctgcatgtg
cgcagctgtctctatgtctttcacatatctaggtaggactaacatttcattctgctgagcagtagattaatagtaaactc
tagcttcacattaatggctcagatttggcatcctttccaaagccagaagatttcactttgtctgaaggaagtgtcacgtg
atgaaaaaggttgccaccctagcgcttaaatgaagattaaaaacataatctaagtaattggaaggagcacccaaatgatc
tttcctccacagccacctgcaaatttactatagatgtcatttgtcttctaactgtctaggtccaataaaataaccactag
aatttgcttag

Protein
Protein IDhabu1_s4508_g14349.t1
Definition-
>habu1_s4508_g14349.t1
MRGSTPCAGRGIAGKRQRRSRPTTSWPSPRESFYLQVFGFVIFSSSVSSTLLSPGFVPVLFNIFINDLDEGIDGELIKFA
DDTKLAGIANTPEDRLKIQEDLDRLEHWALSNKMKFNGEKTCLGRGVFIMAQGSSEMDTAEQEDSSPNMIVYRKIEDIIT
RMQDDKTGGVPIRTVKSFLSKIPSVVTGADIVQWLMKNLSIEDLAESIHMGSLIAAQGYIFPISDHVLTLKDDGTFYRFQ
APYFWPSNCWEPENTDYAIYLCKRTMQNKARLELADYEAENLARLQRAFARKWEFIFMQAEAQVKIDRKKDKTERKILDS
QERAFWDVHRPVPGCVNTTEMDIRKCRRMKNPQRVKKSVYGVTEDSQSQSPAHIPSQPIRKTTKDDVRKQISFLNVQIDR
HCLKMSKVAESLIAYSEQYTDYDPFITPAEPSNPWINDDSVFWDLETSKEPSQHRVKRWGFSIDEVLKDPVGRDQFLRFL
ESEFSSENLRFWLAVQDLKKQTLQDVATRVEDIWQEFLAPGAQSAINLDSHSYEITSQNVKDPGRYTYEDAQEHIYKLMK
SDSYARFLRSNAYQDLLLAKKKGKSLAGKRLTGLMQSS
Protein IDhabu1_s4508_g14349.t2
Definition-
>habu1_s4508_g14349.t2
MRGSTPCAGRGIAGKRQRRSRPTTSWPSPRESFYLQVFGFVIFSSSVSSTLLSPGFVPVLFNIFINDLDEGIDGELIKFA
DDTKLAGIANTPEDRLKIQEDLDRLEHWALSNKMKFNGEKTCLGRGVFIMAQGSSEMDTAEQEDSSPNMIVYRKIEDIIT
RMQDDKTGGVPIRTVKSFLSKIPSVVTGADIVQWLMKNLSIEDLAESIHMGSLIAAQGYIFPISDHVLTLKDDGTFYRFQ
APYFWPSNCWEPENTDYAIYLCKRTMQNKARLELADYEAENLARLQRAFARKWEFIFMQAEAQVKIDRKKDKTERKILDS
QERAFWDVHRPVPGCVNTTEMDIRKCRRMKNPQRVKKSVYGVTEDSQSQSPAHIPSQPIRKTTKDDVRKQISFLNVQIDR
HCLKMSKVAESLIAYSEQYTDYDPFITPAEPSNPWINDDSVFWDLETSKEPSQHRVKRWGFSIDEVLKDPVGRDQFLRFL
ESEFSSENLRFWLAVQDLKKQTLQDVATRVEDIWQEFLAPGAQSAINLDSHSYEITSQNVKDPGRYTYEDAQEHIYKLMK
SDSYARFLRSNAYQDLLLAKKKPENEQARRTSLEKFTRSMGKSLAGKRLTGLMQSS
Protein IDhabu1_s4508_g14349.t3
Definition-
>habu1_s4508_g14349.t3
MRGSTPCAGRGIAGKRQRRSRPTTSWPSPRESFYLQVFGFVIFSSSVSSTLLSPGFVPVLFNIFINDLDEGIDGELIKFA
DDTKLAGIANTPEDRLKIQEDLDRLEHWALSNKMKFNGEKTCLGRGVFIMAQGSSEMDTAEQEDSSPNMIVYRKIEDIIT
RMQDDKTGGVPIRTVKSFLSKIPSVVTGADIVQWLMKNLSIEDLAESIHMGSLIAAQGYIFPISDHVLTLKDDGTFYRFQ
APYFWPSNCWEPENTDYAIYLCKRTMQNKARLELADYEAENLARLQRAFARKWEFIFMQAEAQVKIDRKKDKTERKILDS
QERAFWDVHRPVPGCVNTTEMDIRKCRRMKNPQRVKKSVYGVTEDSQSQSPAHIPSQPIRKTTKDDVRKQISFLNVQIDR
HCLKMSKVAESLIAYSEQYTDYDPFITPAEPSNPWINDDSVFWDLETSKEPSQHRVKRWGFSIDEVLKDPVGRDQFLRFL
ESEFSSENLRFWLAVQDLKKQTLQDVATRVEDIWQEFLAPGAQSAINLDSHSYEITSQNVKDPGRYTYEDAQEHIYKLMK
SDSYARFLRSNAYQDLLLAKKKPENEQARRTSLEKFTRSMKKRVGSFGSRRRQGPCEGSDFCLFP
Protein IDhabu1_s4508_g14349.t4
Definition-
>habu1_s4508_g14349.t4
MRGSTPCAGRGIAGKRQRRSRPTTSWPSPRESFYLQVFGFVIFSSSVSSTLLSPGFVPVLFNIFINDLDEGIDGELIKFA
DDTKLAGIANTPEDRLKIQEDLDRLEHWALSNKMKFNGEKTCLGRGVFIMAQGSSEMDTAEQEDSSPNMIVYRKIEDIIT
RMQDDKTGGVPIRTVKSFLSKIPSVVTASQHCFLGENKKDNKMLERENHPANVHASVQRQACQIGKMKSSFLEGADIVQW
LMKNLSIEDLAESIHMGSLIAAQGYIFPISDHVLTLKDDGTFYRFQAPYFWPSNCWEPENTDYAIYLCKRTMQNKARLEL
ADYEAENLARLQRAFARKWEFIFMQAEAQVKIDRKKDKTERKILDSQERAFWDVHRPVPGCVNTTEMDIRKCRRMKNPQR
VKKSVYGVTEDSQSQSPAHIPSQPIRKTTKDDVRKQISFLNVQIDRHCLKMSKVAESLIAYSEQYTDYDPFITPAEPSNP
WINDDSVFWDLETSKEPSQHRVKRWGFSIDEVLKDPVGRDQFLRFLESEFSSENLRFWLAVQDLKKQTLQDVATRVEDIW
QEFLAPGAQSAINLDSHSYEITSQNVKDPGRYTYEDAQEHIYKLMKSDSYARFLRSNAYQDLLLAKKKPENEQARRTSLE
KFTRSMGKSLAGKRLTGLMQSS

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Okinawa Institute of Science and Technology
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