Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s477_g02166
Locus habu1_scaffold477 : 208286 ... 227075 : +
To GenomeBrowser habu1_scaffold477:208286..227075
Genes list of scaffold habu1_scaffold477

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 22.9
Venom grand-1 50.9
Pit, infrared sensing 27.7
Nose 23.4
Brain-1 13.5
Eye 24.0
fetal fibroblast 38.9
venom gland-2 40.5
Brain-2 17.8
Spleen 37.1
Lung 43.6
Liver 32.8
Kidney 72.1
Pancreas 50.6
Small intestine 48.3
Large intestine 34.0
Stomach 50.3
heart 27.6
ovary 34.5
cheek muscle 30.0

Transcript
Transcript IDhabu1_s477_g02166.t1
Definition-
>habu1_s477_g02166.t1
gagcgaggaggaggaagaggaggacgaaactaaaatgtcttcatgggccaaagcaaacgcagatcaagcacaaacacctg
atcctgaaaacaggcacagaccggggtggattcctcgacttctggacataaatccttacaaaaccgttcagcagagttct
tactctcccccagacggttattcgaaggactttgaggatggcaacagctttgaagaactttttgggcagcagtatcatcc
atccacggacaacgaagatacttttgagagacaccagtcctgtcagaaagatgacggccacaccaaggatgttcatcgcg
ataagttgtacatggagttctaccagcagatagacaaggcatataagagagaaagagcttcggactgtgtcatcgtttcc
atcagcaaggatcaagcggaatattcaacagccataggccatcggttgcaggatcatggccttgtggtggaaatgatata
ccttacttctgaatcaggtcttacacgcgccctccaggaagttaaaaacgatggttctccattttgcgttcttgttgaac
catctaatgtaacactttgctcatgcaccgtaatcatgcttcatcagattatcaaaatacaccgtaatatgcccatggag
gatgccctggctctgatagctaaagaatttcagaaaatttttgctgagcatgaacaacagcagcgcacagagatttccca
caaagcagctgatctggcggatgactacctagaacgggagatttttgagagttaccatgtgcctctaggcattagacacc
tcctctttctgttaagtgagggaaaacatttatatgcggaagaattgaactcaataagtgactacctgaagaccaggaga
aataagcttgaagaaacgaacgctttagccgccgcaggtgaagacgccgggtttccaaatgtcaggccaagcgggagcgc
tctccccccgacgctgagcaagcccccacctctgctgccaacgcctggccgagcccctgtgttaggccagcctggggtgc
cctcgcctaagccagctttgttgggtgaaagaccgttggggcctcttcttcccactccagcactgctggctggtccaaag
ggcaaacctccacctcttcttataaagaccagcaaaagaccgatgcaccacactcctccgcataagcccacaaagcggcc
actgcttgggggcagacctggcctgctgcctacaccagctgctcagtccagatcctcccagcatccctggtcctctaaac
caaagttcctgacttgagaggacgcctgaactaataaggaattaaataaagagtcatcctagatggcagcatttctcttc
taagataagctgagtttgacaaatgtgtgtgtttttaccactcctggcaatgttaaatgcatattattttctgttgtaca
cattcctaagaacaagttgttgtttttttttacttaaaacacaacatagatgtttgtagacaatggataatgtagattcc
taatgttaacctgttctctaaaatcaatgttgtccaaaataaatgacttatttccacaggtcccc
Transcript IDhabu1_s477_g02166.t2
Definition-
>habu1_s477_g02166.t2
gagcgaggaggaggaagaggaggacgaaactaaaatgtcttcatgggccaaagcaaacgcagatcaagcacaaacacctg
atcctgaaaacaggcacagaccggggtggattcctcgacttctggacataaatccttacaaaaccgttcagcagagttct
tactctcccccagacggttattcgaaggactttgaggatggcaacagctttgaagaactttttgggcagcagtatcatcc
atccacggacaacgaagatacttttgagagacaccagtcctgtcagaaagatgacggccacaccaaggatgttcatcgcg
ataagttgtacatggagttctaccagcagatagacaaggcatataagagagaaagagcttcggactgtgtcatcgtttcc
atcagcaaggatcaagcggaatattcaacagccataggccatcggttgcaggatcatggccttgtggtggaaatgatata
ccttacttctgaatcaggtcttacacgcgccctccaggaagttaaaaacgatggttctccattttgcgttcttgttgaac
catctaatgtaacactttgctcatgcaccgtaatcatgcttcatcagattatcaaaatacaccgtaatatgcccatggag
gatgccctggctctgatagctaaagaatttcagaaaatttttgctgagcatgaacaacagcagcgcacagagatttccca
caaagcagctgatctggcggatgactacctagaacgggagatttttgagagttaccatgtgcctctaggcattagacacc
tcctctttctgttaagtgagggaaaacatttatatgcggaagaattgaactcaataagtgactacctgaagaccaggaga
aataagcttgaaggttttgttgcagaaacgaacgctttagccgccgcaggtgaagacgccgggtttccaaatgtcaggcc
aagcgggagcgctctccccccgacgctgagcaagcccccacctctgctgccaacgcctggccgagcccctgtgttaggcc
agcctggggtgccctcgcctaagccagctttgttgggtgaaagaccgttggggcctcttcttcccactccagcactgctg
gctggtccaaagggcaaacctccacctcttcttataaagaccagcaaaagaccgatgcaccacactcctccgcataagcc
cacaaagcggccactgcttgggggcagacctggcctgctgcctacaccagctgctcagtccagatcctcccagcatccct
ggtcctctaaaccaaagttcctgacttgagaggacgcctgaactaataaggaattaaataaagagtcatcctagatggca
gcatttctcttctaagataagctgagtttgacaaatgtgtgtgtttttaccactcctggcaatgttaaatgcatattatt
ttctgttgtacacattcctaagaacaagttgttgtttttttttacttaaaacacaacatagatgtttgtagacaatggat
aatgtagattcctaatgttaacctgttctctaaaatcaatgttgtccaaaataaatgacttatttccacaggtcccc

Protein
Protein IDhabu1_s477_g02166.t1
Definition-
>habu1_s477_g02166.t1
MSSWAKANADQAQTPDPENRHRPGWIPRLLDINPYKTVQQSSYSPPDGYSKDFEDGNSFEELFGQQYHPSTDNEDTFERH
QSCQKDDGHTKDVHRDKLYMEFYQQIDKAYKRERASDCVIVSISKDQAEYSTAIGHRLQDHGLVVEMIYLTSESGLTRAL
QEVKNDGSPFCVLVEPSNVTLCSCTVIMLHQIIKIHRNMPMEDALALIAKEFQKIFAEHEQQQRTEISHKAADLADDYLE
REIFESYHVPLGIRHLLFLLSEGKHLYAEELNSISDYLKTRRNKLEETNALAAAGEDAGFPNVRPSGSALPPTLSKPPPL
LPTPGRAPVLGQPGVPSPKPALLGERPLGPLLPTPALLAGPKGKPPPLLIKTSKRPMHHTPPHKPTKRPLLGGRPGLLPT
PAAQSRSSQHPWSSKPKFLT
Protein IDhabu1_s477_g02166.t2
Definition-
>habu1_s477_g02166.t2
MSSWAKANADQAQTPDPENRHRPGWIPRLLDINPYKTVQQSSYSPPDGYSKDFEDGNSFEELFGQQYHPSTDNEDTFERH
QSCQKDDGHTKDVHRDKLYMEFYQQIDKAYKRERASDCVIVSISKDQAEYSTAIGHRLQDHGLVVEMIYLTSESGLTRAL
QEVKNDGSPFCVLVEPSNVTLCSCTVIMLHQIIKIHRNMPMEDALALIAKEFQKIFAEHEQQQRTEISHKAADLADDYLE
REIFESYHVPLGIRHLLFLLSEGKHLYAEELNSISDYLKTRRNKLEGFVAETNALAAAGEDAGFPNVRPSGSALPPTLSK
PPPLLPTPGRAPVLGQPGVPSPKPALLGERPLGPLLPTPALLAGPKGKPPPLLIKTSKRPMHHTPPHKPTKRPLLGGRPG
LLPTPAAQSRSSQHPWSSKPKFLT

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