Gene
| Gene Model ID | habu1_s480_g02172 |
|---|---|
| Locus | habu1_scaffold480 : 267866 ... 283417 : + |
| To GenomeBrowser | habu1_scaffold480:267866..283417 |
| Genes list of scaffold | habu1_scaffold480 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cerebellin- partial | GO:0005576 GO:0007157 GO:0009306 GO:0021707 GO:0030054 GO:0042803 GO:0045211 GO:0051965 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s480_g02172.t1 | 1 | 1 | C1q | 60 | 186 | 4.1e-25 | 88.2 | 7.5e-29 | 5.6e-25 | 87.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s480_g02172.t1 | gi|637352659|ref|XP_008118643.1| | PREDICTED: cerebellin-1 [Anolis carolinensis] | 0.0 |
| habu1_s480_g02172.t1 | gi|564268961|ref|XP_006273260.1| | PREDICTED: cerebellin-1 [Alligator mississippiensis] | 0.0 |
| habu1_s480_g02172.t1 | gi|471362384|ref|XP_004371752.1| | 0.0 | |
| habu1_s480_g02172.t1 | gi|641758361|ref|XP_008165191.1| | PREDICTED: cerebellin-1 [Chrysemys picta bellii] | 0.0 |
| habu1_s480_g02172.t1 | gi|562852347|ref|XP_006154856.1| | PREDICTED: cerebellin-1, partial [Tupaia chinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.0 |
| Nose | 0.1 |
| Brain-1 | 0.3 |
| Eye | 0.3 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.1 |
| Brain-2 | 3.2 |
| Spleen | 0.0 |
| Lung | 0.0 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.0 |
| Large intestine | 0.1 |
| Stomach | 0.0 |
| heart | 0.0 |
| ovary | 0.1 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s480_g02172.t1 |
|---|---|
| Definition | - |
>habu1_s480_g02172.t1 gagccggccgaaaggcggaggggaggcggcggcggcggcggcggcggcgcgatgctggccctggagctgctgagcctggc ttggctagccggcgtggtggcggggcagaacgagacggagcccatcatcctggagggcaagtgtctggtggtgtgcgact ccaacccggcttccgatccggccggcacggcgctgggcatctcggtgcgctcgggcagcgccaaggtggccttctcggcc atccgcagcaccaaccacgagccgtcggagatgagcaaccgcaccatgatcatttacttcgaccaggtgctggtcaacat tgggctcaactttgactccgaacgcagcactttcatcgcaccccgaaagggcatctacagctttaatttccacgtggtca aggtgtacaacaggcagaccatccaggtgagcttaatgctcaacgggtggccggtgatttctgcctttgcgggggaccaa gacgtcacacgggaagctgccagcaacggggtcctgatccagatggagaaaggagaccgcgcctatttaaaactggagcg aggaaatttgatggggggctggaagtattccactttctcaggatttctagggtcagcaacttctggcttcagctttgatg atgatgatgatgatgatgatgatgatgatgatgatgatgatgatagccattcagttgtgtcctattcttggtgactctgt gggccaggtctctccatgtccttcaaacgacatgtgtcatttagtccttagtcttaaattctgcaataccaggacacctt aagaggataaatgcatttctgtaattgcccaatgaatgaaagagtgatttcattggggtgggagaaaaataaacacacca ctttcttttaataatggcattttaataaaaaatatgtacccatatagcagggctgtattactattattcttctcttcttt cctactactttctccttttggtatcttatgtttatattactttgttgtttgtatgtacactgggaacttatgcattggag acaaattccttgtgtgtctaatcacccctggacaataaagaatattctattctgttctatt |
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Protein
| Protein ID | habu1_s480_g02172.t1 |
|---|---|
| Definition | - |
>habu1_s480_g02172.t1 MLALELLSLAWLAGVVAGQNETEPIILEGKCLVVCDSNPASDPAGTALGISVRSGSAKVAFSAIRSTNHEPSEMSNRTMI IYFDQVLVNIGLNFDSERSTFIAPRKGIYSFNFHVVKVYNRQTIQVSLMLNGWPVISAFAGDQDVTREAASNGVLIQMEK GDRAYLKLERGNLMGGWKYSTFSGFLGSATSGFSFDDDDDDDDDDDDDDDDSHSVVSYSW |
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