Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s4826_g14838
Locus habu1_scaffold4826 : 563036 ... 685462 : -
To GenomeBrowser habu1_scaffold4826:563036..685462
Genes list of scaffold habu1_scaffold4826

Annotation by Blast2GO
Annotation GO
spermatogenesis-associated protein 5 GO:0005524 GO:0005737

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s4826_g14838.t2 2 1 AAA_16 406 501 1.7e-13 50.9 1.7e-08 6.5e-06 26.2
habu1_s4826_g14838.t2 1 1 Zeta_toxin 407 447 1.7e-07 30.5 9.3e-06 0.0034 16.4
habu1_s4826_g14838.t2 1 1 TIP49 408 456 3.9e-11 42.3 1.1e-08 4.3e-06 25.7
habu1_s4826_g14838.t2 1 1 AAA_22 409 517 3.0e-10 40.3 2.4e-07 8.8e-05 22.6
habu1_s4826_g14838.t2 2 1 RuvB_N 410 547 1.7e-16 59.9 1.3e-12 4.9e-10 38.8
habu1_s4826_g14838.t2 2 1 AAA_5 410 531 1.8e-13 50.4 1.0e-08 3.9e-06 26.6
habu1_s4826_g14838.t2 1 1 AAA_19 410 430 1.9e-06 27.5 8.1e-06 0.003 17.2
habu1_s4826_g14838.t2 2 1 AAA 411 543 0.0 307.1 0.0 8.40779e-45 152.1
habu1_s4826_g14838.t2 1 1 AAA_2 411 512 3.6e-09 36.7 2.3e-07 8.5e-05 22.5
habu1_s4826_g14838.t2 1 1 AAA_17 411 447 1.2e-08 35.8 7.4e-07 0.00027 21.7
habu1_s4826_g14838.t2 1 1 AAA_14 411 519 5.6e-08 32.7 1.7e-06 0.00064 19.6
habu1_s4826_g14838.t2 1 1 AAA_33 411 456 2.6e-07 30.6 2.6e-06 0.00095 19.0
habu1_s4826_g14838.t2 2 2 AAA_16 680 778 1.7e-13 50.9 6.0e-07 0.00022 21.2
habu1_s4826_g14838.t2 2 2 RuvB_N 684 720 1.7e-16 59.9 3.4e-06 0.0013 17.8
habu1_s4826_g14838.t2 2 2 AAA_5 684 801 1.8e-13 50.4 9.6e-07 0.00035 20.2
habu1_s4826_g14838.t2 2 2 AAA 685 817 0.0 307.1 0.0 4.2039e-45 152.9

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 3.1
Venom grand-1 2.2
Pit, infrared sensing 2.9
Nose 3.5
Brain-1 2.1
Eye 3.4
fetal fibroblast 8.8
venom gland-2 2.3
Brain-2 1.6
Spleen 3.1
Lung 2.0
Liver 1.6
Kidney 1.7
Pancreas 2.0
Small intestine 1.7
Large intestine 2.2
Stomach 2.0
heart 3.0
ovary 8.3
cheek muscle 2.4

Transcript
Transcript IDhabu1_s4826_g14838.t1
Definition-
>habu1_s4826_g14838.t1
gggccgccagcgcgaagagagaaaaggccggctgcgcgcggaccaaacagcccagccagccatggcggctgcgttgctgc
tgcaaaggaacgcgaagagaaaggaggtagagttactcacaggccggacttccgtgcagctgttccagttggaaaacctg
gctcagtcaaggcttttcttacacaagaggaaaagcaaaaaacggcctccttcggaaaaggactcgactcttgacgaccg
agacgcaacccaggaacacctcgggtggcagagtttgtcggctgcagactttttggacaaggaagatgacaaagtcccca
aaatatatagaggatcttttgtgcaattggcgctcaacaacatgaagctggcaaatatttctatagggcgaccagtgctg
cttaccagtacaaatgggaagcaagaggtttgcacagcatggcctgttgcaggcttccctggtaaaaaaattggcttaaa
tgcaattacacagaagaatctaaaagtggtacctggtgatacggtctttgtccagcctgtgactggtgctgtaattcagg
cagaggaagtggaagtaaagctaggggttaaagatgactatatcagtactgaagacttgtccattagcctcttaagaaac
ttagatggaaagatagtattgccaggaaatttcctgcaaattactttctttggccgatcttgtgacttaaaggttacaaa
ggtgaaaggaatggatggtgtgttgctgcaaatgcaagatgttttaaaaacaccacaggaacgatcactggagaatttgg
atagccatcatttcaatttatctattgagcttggaaaattagtaataacagacagtgaagtatctaccagtactccatgt
aagcatgaggatcataacatatccatgaatgcttctttaaatagtgtggggcatgaagcattcaatcctgatccagcaga
gatacttgatggtgatgggtctagccttcattctgaatcaatcatatcacaagactgtgagaaaggttttgcaggtgaag
aattacctttggctgataaaacaggattgtcacagaattcggaaacattttacttcatatcgtcaaggactagggtcagt
ttcattcaaccacaagccaaagtgacagaagaattcaatcttgaaccaaaagttacttacgattcaataggtggactcag
taaccagctgaaaactataaaagaaatgattgaacttcctttgaagcagcctgatctatttaggaaatatggaatcccat
ctccaagaggagtgctattatatggccctccgggtacaggcaagaccttgctagccagagcaattgcaaatgagattgga
gctaacttctgtacagttaatggtccagaaataataagcaaattttatggagaaagtgaagccaggctacgacagatatt
ttctgaagcctctttacggcggccatccattatatttattgatgaaattgatgcactctgtccaaagagagaagaagccc
agaacgaagttgaaaaaagaattgtagcttcattgttaacgctgatggatggcattggatcagaagataatcaagggcag
ctcttagttcttggagctaccaatcgccctcatgcactagattcagccctgcgcagaccaggacgttttgataaagagat
agaaattggagttcccaattctcaagatcgactagacatcttaaggaaggttctcagtaagactcctcactcattgacag
catcagatttgactcaactggcagacagtgcccatgggtacgtaggagcagacctagcagccctgtgcaaggaagcagga
atgcatgctttgcggagaatatttcataagaaagagaatctcctggatgatgatgtgtctgtatctgtaattattaatcg
cagtgattttctgcaggcaatgaatgatgtcaggcccagcgccatgagagaggtgacaattgatgtacccaaagtatcct
ggtcagacataggagggctggaagatgttaaactgaaattaaagcaggctgttgaatggccactgaagcatcctgaatct
ttcattcgaatgggcattcagccaccaaaaggagtactgctatatggaccaccaggatgttctaaaaccatgattgcaaa
ggccttggctcatgaaagtggtctaaacttcttggcagtaaagggacctgaattgatgaacaaatatgttggagaatctg
aacgtgcagtcagagagatatttaggaaagccagagctgtttcaccgtccatattgttttttgatgaactagatgccttg
gctgtagaacgggggagttcttcaagttctgcaaatgttatgaaccgtgtcttggcacaattgttgactgaaatggatgg
gatcgaacagttaaaggatgtgacagttttggcagctacaaaccggccagatatgatagacaaggcattgatacggcctg
gtcgatttgacagaattatatatgttcctttgcctgatgaagccactcgcagagaaatcttcaaaattcagttttgtaat
atgccaatatcttctgaggtcaatctggatgagcttgtcatacagacagaaaagtattcaggagcagagttaaggaatat
gaaagattttttcccagcaactttatgctgctcatgataagaaaagacattacttgcaactgtgaaatcccggcatctcc
accatttcgaggggggacatagcgtacattctcggtcgtgggagtttggctcctggcaccagttcgatggagcagtctgt
gaggggataactgcagtttgtagagaagctgctctccttgcacttcaagaagatattgaggccaaatatatcatgaagga
gcattttcaacaagctttggttgttgtgactcctagaattccagattccctacagacattttatgaagagtatcagcagc
ggagtggattgcattcactgtgagaaagtgattaatgaacatatagtacgcaacttgatttctagaagataagtagggtt
tttttcaaagaaacgtgttctttcaattcagatatgtaaaatgaattttattaataatttttgaataaaaataattagtt
tttgaataaatactgaagaagcttttgaaataaaaaatgaagtgttttgaataaaaataaacttgagaactatgtga
Transcript IDhabu1_s4826_g14838.t2
Definition-
>habu1_s4826_g14838.t2
gggccgccagcgcgaagagagaaaaggccggctgcgcgcggaccaaacagcccagccagccatggcggctgcgttgctgc
tgcaaaggaacgcgaagagaaaggaggtagagttactcacaggccggacttccgtgcagctgttccagttggaaaacctg
gctcagtcaaggcttttcttacacaagaggaaaagcaaaaaacggcctccttcggaaaaggactcgactcttgacgaccg
agacgcaacccaggaacacctcgggtggcagagtttgtcggctgcagactttttggacaaggaagatgacaaagtcccca
aaatatatagaggatcttttgtgcaattggcgctcaacaacatgaagctggcaaatatttctatagggcgaccagtgctg
cttaccagtacaaatgggaagcaagaggtttgcacagcatggcctgttgcaggcttccctggtaaaaaaattggcttaaa
tgcaattacacagaagaatctaaaagtggtacctggtgatacggtctttgtccagcctgtgactggtgctgtaattcagg
cagaggaagtggaagtaaagctaggggttaaagatgactatatcagtactgaagacttgtccattagcctcttaagaaac
ttagatggaaagatagtattgccaggaaatttcctgcaaattactttctttggccgatcttgtgacttaaaggttacaaa
ggtgaaaggaatggatggtgtgttgctgcaaatgcaagatgttttaaaaacaccacaggaacgatcactggagaatttgg
atagccatcatttcaatttatctattgagcttggaaaattagtaataacagacagtgaagtatctaccagtactccatgt
aagcatgaggatcataacatatccatgaatgcttctttaaatagtgtggggcatgaagcattcaatcctgatccagcaga
gatacttgatggtgatgggtctagccttcattctgaatcaatcatatcacaagactgtgagaaaggttttgcaggtgaag
aattacctttggctgataaaacaggattgtcacagaattcggaaacattttacttcatatcgtcaaggactagggtcagt
ttcattcaaccacaagccaaagtgacagaagaattcaatcttgaaccaaaagttacttacgattcaataggtggactcag
taaccagctgaaaactataaaagaaatgattgaacttcctttgaagcagcctgatctatttaggaaatatggaatcccat
ctccaagaggagtgctattatatggccctccgggtacaggcaagaccttgctagccagagcaattgcaaatgagattgga
gctaacttctgtacagttaatggtccagaaataataagcaaattttatggagaaagtgaagccaggctacgacagatatt
ttctgaagcctctttacggcggccatccattatatttattgatgaaattgatgcactctgtccaaagagagaagaagccc
agaacgaagttgaaaaaagaattgtagcttcattgttaacgctgatggatggcattggatcagaagataatcaagggcag
ctcttagttcttggagctaccaatcgccctcatgcactagattcagccctgcgcagaccaggacgttttgataaagagat
agaaattggagttcccaattctcaagatcgactagacatcttaaggaaggttctcagtaagactcctcactcattgacag
catcagatttgactcaactggcagacagtgcccatgggtacgtaggagcagacctagcagccctgtgcaaggaagcagga
atgcatgctttgcggagaatatttcataagaaagagaatctcctggatgatgatgtgtctgtatctgtaattattaatcg
cagtgattttctgcaggcaatgaatgatgtcaggcccagcgccatgagagaggtgacaattgatgtacccaaagtatcct
ggtcagacataggagggctggaagatgttaaactgaaattaaagcaggctgttgaatggccactgaagcatcctgaatct
ttcattcgaatgggcattcagccaccaaaaggagtactgctatatggaccaccaggatgttctaaaaccatgattgcaaa
ggccttggctcatgaaagtggtctaaacttcttggcagtaaagggacctgaattgatgaacaaatatgttggagaatctg
aacgtgcagtcagagagatatttaggaaagccagagctgtttcaccgtccatattgttttttgatgaactagatgccttg
gctgtagaacgggggagttcttcaagttctgcaaatgttatgaaccgtgtcttggcacaattgttgactgaaatggatgg
gatcgaacagttaaaggatgtgacagttttggcagctacaaaccggccagatatgatagacaaggcattgatacggcctg
gtcgatttgacagaattatatatgttcctttgcctgatgaagccactcgcagagaaatcttcaaaattcagttttgtaat
atgccaatatcttctgaggtcaatctggatgagcttgtcatacagacagaaaagtattcaggagcagagataactgcagt
ttgtagagaagctgctctccttgcacttcaagaagatattgaggccaaatatatcatgaaggagcattttcaacaagctt
tggttgttgtgactcctagaattccagattccctacagacattttatgaagagtatcagcagcggagtggattgcattca
ctgtgagaaagtgattaatgaacatatagtacgcaacttgatttctagaagataagtagggtttttttcaaagaaacgtg
ttctttcaattcagatatgtaaaatgaattttattaataatttttgaataaaaataattagtttttgaataaatactgaa
gaagcttttgaaataaaaaatgaagtgttttgaataaaaataaacttgagaactatgtga

Protein
Protein IDhabu1_s4826_g14838.t1
Definition-
>habu1_s4826_g14838.t1
MAAALLLQRNAKRKEVELLTGRTSVQLFQLENLAQSRLFLHKRKSKKRPPSEKDSTLDDRDATQEHLGWQSLSAADFLDK
EDDKVPKIYRGSFVQLALNNMKLANISIGRPVLLTSTNGKQEVCTAWPVAGFPGKKIGLNAITQKNLKVVPGDTVFVQPV
TGAVIQAEEVEVKLGVKDDYISTEDLSISLLRNLDGKIVLPGNFLQITFFGRSCDLKVTKVKGMDGVLLQMQDVLKTPQE
RSLENLDSHHFNLSIELGKLVITDSEVSTSTPCKHEDHNISMNASLNSVGHEAFNPDPAEILDGDGSSLHSESIISQDCE
KGFAGEELPLADKTGLSQNSETFYFISSRTRVSFIQPQAKVTEEFNLEPKVTYDSIGGLSNQLKTIKEMIELPLKQPDLF
RKYGIPSPRGVLLYGPPGTGKTLLARAIANEIGANFCTVNGPEIISKFYGESEARLRQIFSEASLRRPSIIFIDEIDALC
PKREEAQNEVEKRIVASLLTLMDGIGSEDNQGQLLVLGATNRPHALDSALRRPGRFDKEIEIGVPNSQDRLDILRKVLSK
TPHSLTASDLTQLADSAHGYVGADLAALCKEAGMHALRRIFHKKENLLDDDVSVSVIINRSDFLQAMNDVRPSAMREVTI
DVPKVSWSDIGGLEDVKLKLKQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALAHESGLNFLAVKGPELMN
KYVGESERAVREIFRKARAVSPSILFFDELDALAVERGSSSSSANVMNRVLAQLLTEMDGIEQLKDVTVLAATNRPDMID
KALIRPGRFDRIIYVPLPDEATRREIFKIQFCNMPISSEVNLDELVIQTEKYSGAELRNMKDFFPATLCCS
Protein IDhabu1_s4826_g14838.t2
Definition-
>habu1_s4826_g14838.t2
MAAALLLQRNAKRKEVELLTGRTSVQLFQLENLAQSRLFLHKRKSKKRPPSEKDSTLDDRDATQEHLGWQSLSAADFLDK
EDDKVPKIYRGSFVQLALNNMKLANISIGRPVLLTSTNGKQEVCTAWPVAGFPGKKIGLNAITQKNLKVVPGDTVFVQPV
TGAVIQAEEVEVKLGVKDDYISTEDLSISLLRNLDGKIVLPGNFLQITFFGRSCDLKVTKVKGMDGVLLQMQDVLKTPQE
RSLENLDSHHFNLSIELGKLVITDSEVSTSTPCKHEDHNISMNASLNSVGHEAFNPDPAEILDGDGSSLHSESIISQDCE
KGFAGEELPLADKTGLSQNSETFYFISSRTRVSFIQPQAKVTEEFNLEPKVTYDSIGGLSNQLKTIKEMIELPLKQPDLF
RKYGIPSPRGVLLYGPPGTGKTLLARAIANEIGANFCTVNGPEIISKFYGESEARLRQIFSEASLRRPSIIFIDEIDALC
PKREEAQNEVEKRIVASLLTLMDGIGSEDNQGQLLVLGATNRPHALDSALRRPGRFDKEIEIGVPNSQDRLDILRKVLSK
TPHSLTASDLTQLADSAHGYVGADLAALCKEAGMHALRRIFHKKENLLDDDVSVSVIINRSDFLQAMNDVRPSAMREVTI
DVPKVSWSDIGGLEDVKLKLKQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALAHESGLNFLAVKGPELMN
KYVGESERAVREIFRKARAVSPSILFFDELDALAVERGSSSSSANVMNRVLAQLLTEMDGIEQLKDVTVLAATNRPDMID
KALIRPGRFDRIIYVPLPDEATRREIFKIQFCNMPISSEVNLDELVIQTEKYSGAEITAVCREAALLALQEDIEAKYIMK
EHFQQALVVVTPRIPDSLQTFYEEYQQRSGLHSL

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Okinawa Institute of Science and Technology
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