Gene
| Gene Model ID | habu1_s4826_g14841 |
|---|---|
| Locus | habu1_scaffold4826 : 722320 ... 759892 : - |
| To GenomeBrowser | habu1_scaffold4826:722320..759892 |
| Genes list of scaffold | habu1_scaffold4826 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| bardet-biedl syndrome 12 protein | GO:0005524 GO:0044267 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s4826_g14841.t2 | 1 | 1 | Cpn60_TCP1 | 20 | 139 | 2.8e-09 | 36.1 | 4.1e-13 | 3.0e-09 | 36.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 3.3 |
| Venom grand-1 | 4.1 |
| Pit, infrared sensing | 3.9 |
| Nose | 4.6 |
| Brain-1 | 2.2 |
| Eye | 3.8 |
| fetal fibroblast | 5.2 |
| venom gland-2 | 7.1 |
| Brain-2 | 2.1 |
| Spleen | 4.5 |
| Lung | 3.2 |
| Liver | 6.0 |
| Kidney | 21.5 |
| Pancreas | 7.2 |
| Small intestine | 3.4 |
| Large intestine | 3.5 |
| Stomach | 5.5 |
| heart | 5.2 |
| ovary | 9.0 |
| cheek muscle | 9.2 |
Transcript
| Transcript ID | habu1_s4826_g14841.t1 |
|---|---|
| Definition | - |
>habu1_s4826_g14841.t1 cgatggcgcctcctttgcaaagaggcaaaattagggcccttatggaagaaggattagtagtttctcgggtccaaggcgcg gattctaacattcacaagaaactaaagctggacagaacttccctgaacaagtcactatagaagcatgcaaccatggtccc atctattggggaaagtacttggttacaaaattgccaacatgctgacacatcatcatcagaattcatagaattttgaaaag caactgaggaatggcagccaaagcctttgaaatatttcagtatggtcctttacatattttacaatcaatcctaaccttcg gaaattccctaccataatgaccatcagattttattctgccagcataagatccgaaatacaaataaaataaatgtacaaac catgactaaggttatcaatttgttctcttttgcatggagtggagatgaatcttttttactgcaggactattggcaggtag gagatagagacaatggaggatggttttctgttgatcagctgggagaaaggagagtaagcactgcacatctctggatgttc tttctattcatggcctgcaggactgaagacaattagctttcctgggaacatggctttcagaaatgtgaacagaaagagac atattggtctgcaacaactttcagctttggcttccactggacggacacttttaggacccatgaaattgtccaaatttata gttgatgaaagtattcctggtggtgtgttgatttgttctccactaagacttcttgaaaacatggacttaaacagtgcggt ggggcagcttcttaatgaagccatccaagcacagaacaaagattataaaacagggatgactactctgctctttctcgttg gtgcatggagcaatgctgtacttgagtgccttcaacatgatgttccactttcactcatagtagctataatgtctgaaggt ctggattcttgcattgaacaagtgcagtctattacattatcactacacaacatacagcaaaagctaaaggatattcctat agaatgcgatgacttgagtcttatcaacagtagctctagcccctctggaaggcagtttacagacattaagaaaacaggta gcaagtctggcactagtattttaaatttgcttaaaaatgaactatcggaagaaaaatcagaagatcatatgatcgagcaa ataaatgatatcagtccaggcacccccatcatcaacagtacgaaatgtttactatctgagtcaatgagcagcaattttgt tttcagtgtttgcaagacaatgattcagaaaaactctgatttgcataattgtcatttggatgtattgacttataacacaa gatcaaaattaacccacagtagatactttagctatgtaaataaatgtcagtcagcacaacgaacaatacatctggatgga tgcccaaaaccttttggcaagtttagttatttggaacaactagcgttttctcttagccatggaaatgaatctgccacaaa actgatacaggacattctcagatgccagcttccaggaacatgtgccaaatttgtaatttgtttagcactttgggagttga ttgaatcgtttttgctcagcgtgaaattggcatagcatctgtgattgcccagcaggctcctcatcattgaaagatctcta tgggacttaacattccaactaaccagaaaatttcttctgaaaatttcccaacaagtaaaattccatggtcattccttcag catacattggcaacatttggttgccaagctttactcaagacatactgatcaagaaatctagagttctgcagtgtagccag gttacaggtaacctttccagcctgattaacatcaattacagttttggggacatcctcagaaatctcctttgtttgagtca tgacgcaattccagatacctgtgttgcgaagataagattttgattgtgaaagccttgaattgtcctttaaataggatctc tcacctgactattctctcattgactgaaatacccagactccaataccccctttaaatgtaccgataatcctagaagttca catacttttgccacagaaaaagttactttggatccttttcctcaataagtcaacaaataagcctgatatttttgactcat ttgttaaattgggttttcattgtctaattttaggacttgggtggaaaagagatagtgtttttagtcacatttatgcagaa acattgaaaatacaaaagggttcgctgtcttttaagcagcaatgtaacacttggggctatactttaaataaagaaatttt atgcccttgaataaaaaatattgatccgactaattat |
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| Transcript ID | habu1_s4826_g14841.t2 |
| Definition | - |
>habu1_s4826_g14841.t2 cgatggcgcctcctttgcaaagaggcaaaattagggcccttatggaagaaggattagtagtttctcgggtccaaggcgcg gattctaacattcacaagaaactaaagctggacaggactattggcaggtaggagatagagacaatggaggatggttttct gttgatcagctgggagaaaggagagtaagcactgcacatctctggatgttctttctattcatggcctgcaggactgaaga caattagctttcctgggaacatggctttcagaaatgtgaacagaaagagacatattggtctgcaacaactttcagctttg gcttccactggacggacacttttaggacccatgaaattgtccaaatttatagttgatgaaagtattcctggtggtgtgtt gatttgttctccactaagacttcttgaaaacatggacttaaacagtgcggtggggcagcttcttaatgaagccatccaag cacagaacaaagattataaaacagggatgactactctgctctttctcgttggtgcatggagcaatgctgtacttgagtgc cttcaacatgatgttccactttcactcatagtagctataatgtctgaaggtctggattcttgcattgaacaagtgcagtc tattacattatcactacacaacatacagcaaaagctaaaggatattcctatagaatgcgatgacttgagtcttatcaaca gtagctctagcccctctggaaggcagtttacagacattaagaaaacaggtagcaagtctggcactagtattttaaatttg cttaaaaatgaactatcggaagaaaaatcagaagatcatatgatcgagcaaataaatgatatcagtccaggcacccccat catcaacagtacgaaatgtttactatctgagtcaatgagcagcaattttgttttcagtgtttgcaagacaatgattcaga aaaactctgatttgcataattgtcatttggatgtattgacttataacacaagatcaaaattaacccacagtagatacttt agctatgtaaataaatgtcagtcagcacaacgaacaatacatctggatggatgcccaaaaccttttggcaagtttagtta tttggaacaactagcgttttctcttagccatggaaatgaatctgccacaaaactgatacaggacattctcagatgccagc ttccaggaacatgtgccaaatttgtaatttgtttagcactttgggagttgattgaatcgtttttgctcagcgtgaaattg gcatagcatctgtgattgcccagcaggctcctcatcattgaaagatctctatgggacttaacattccaactaaccagaaa atttcttctgaaaatttcccaacaagtaaaattccatggtcattccttcagcatacattggcaacatttggttgccaagc tttactcaagacatactgatcaagaaatctagagttctgcagtgtagccaggttacaggtaacctttccagcctgattaa catcaattacagttttggggacatcctcagaaatctcctttgtttgagtcatgacgcaattccagatacctgtgttgcga agataagattttgattgtgaaagccttgaattgtcctttaaataggatctctcacctgactattctctcattgactgaaa tacccagactccaataccccctttaaatgtaccgataatcctagaagttcacatacttttgccacagaaaaagttacttt ggatccttttcctcaataagtcaacaaataagcctgatatttttgactcatttgttaaattgggttttcattgtctaatt ttaggacttgggtggaaaagagatagtgtttttagtcacatttatgcagaaacattgaaaatacaaaagggttcgctgtc ttttaagcagcaatgtaacacttggggctatactttaaataaagaaattttatgcccttgaataaaaaatattgatccga ctaattat |
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Protein
| Protein ID | habu1_s4826_g14841.t1 |
|---|---|
| Definition | - |
>habu1_s4826_g14841.t1 MAFRNVNRKRHIGLQQLSALASTGRTLLGPMKLSKFIVDESIPGGVLICSPLRLLENMDLNSAVGQLLNEAIQAQNKDYK TGMTTLLFLVGAWSNAVLECLQHDVPLSLIVAIMSEGLDSCIEQVQSITLSLHNIQQKLKDIPIECDDLSLINSSSSPSG RQFTDIKKTGSKSGTSILNLLKNELSEEKSEDHMIEQINDISPGTPIINSTKCLLSESMSSNFVFSVCKTMIQKNSDLHN CHLDVLTYNTRSKLTHSRYFSYVNKCQSAQRTIHLDGCPKPFGKFSYLEQLAFSLSHGNESATKLIQDILRCQLPGTCAK FVICLALWELIESFLLSVKLA |
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| Protein ID | habu1_s4826_g14841.t2 |
| Definition | - |
>habu1_s4826_g14841.t2 MAFRNVNRKRHIGLQQLSALASTGRTLLGPMKLSKFIVDESIPGGVLICSPLRLLENMDLNSAVGQLLNEAIQAQNKDYK TGMTTLLFLVGAWSNAVLECLQHDVPLSLIVAIMSEGLDSCIEQVQSITLSLHNIQQKLKDIPIECDDLSLINSSSSPSG RQFTDIKKTGSKSGTSILNLLKNELSEEKSEDHMIEQINDISPGTPIINSTKCLLSESMSSNFVFSVCKTMIQKNSDLHN CHLDVLTYNTRSKLTHSRYFSYVNKCQSAQRTIHLDGCPKPFGKFSYLEQLAFSLSHGNESATKLIQDILRCQLPGTCAK FVICLALWELIESFLLSVKLA |
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