Gene
| Gene Model ID | habu1_s4826_g14842 |
|---|---|
| Locus | habu1_scaffold4826 : 761323 ... 768996 : + |
| To GenomeBrowser | habu1_scaffold4826:761323..768996 |
| Genes list of scaffold | habu1_scaffold4826 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| centrin- partial | GO:0005509 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s4826_g14842.t1 | 4 | 1 | EF-hand_8 | 30 | 58 | 1.9e-20 | 72.2 | 9.1e-06 | 0.009 | 15.6 |
| habu1_s4826_g14842.t1 | 4 | 1 | EF-hand_1 | 32 | 60 | 2.5e-27 | 92.0 | 1.3e-07 | 0.00013 | 21.0 |
| habu1_s4826_g14842.t1 | 3 | 1 | EF-hand_6 | 32 | 61 | 9.9e-22 | 74.8 | 1.1e-09 | 1.1e-06 | 27.9 |
| habu1_s4826_g14842.t1 | 2 | 1 | EF-hand_7 | 33 | 93 | 2.7e-26 | 91.4 | 3.1e-15 | 3.1e-12 | 46.4 |
| habu1_s4826_g14842.t1 | 2 | 1 | EF-hand_9 | 36 | 94 | 7.6e-13 | 48.1 | 4.1e-07 | 0.0004 | 20.2 |
| habu1_s4826_g14842.t1 | 4 | 2 | EF-hand_8 | 46 | 94 | 1.9e-20 | 72.2 | 3.4e-07 | 0.00034 | 20.1 |
| habu1_s4826_g14842.t1 | 4 | 2 | EF-hand_1 | 68 | 95 | 2.5e-27 | 92.0 | 1.5e-07 | 0.00015 | 20.8 |
| habu1_s4826_g14842.t1 | 4 | 3 | EF-hand_8 | 85 | 124 | 1.9e-20 | 72.2 | 1.1e-06 | 0.0011 | 18.5 |
| habu1_s4826_g14842.t1 | 4 | 3 | EF-hand_1 | 105 | 131 | 2.5e-27 | 92.0 | 6.6e-09 | 6.5e-06 | 25.0 |
| habu1_s4826_g14842.t1 | 3 | 2 | EF-hand_6 | 105 | 131 | 9.9e-22 | 74.8 | 9.8e-09 | 9.7e-06 | 25.0 |
| habu1_s4826_g14842.t1 | 2 | 2 | EF-hand_7 | 106 | 166 | 2.7e-26 | 91.4 | 8.0e-16 | 7.9e-13 | 48.3 |
| habu1_s4826_g14842.t1 | 2 | 1 | EF-hand_5 | 107 | 129 | 1.9e-12 | 45.9 | 3.3e-09 | 3.2e-06 | 26.2 |
| habu1_s4826_g14842.t1 | 2 | 2 | EF-hand_9 | 109 | 168 | 7.6e-13 | 48.1 | 5.9e-09 | 5.9e-06 | 26.1 |
| habu1_s4826_g14842.t1 | 4 | 4 | EF-hand_8 | 118 | 167 | 1.9e-20 | 72.2 | 1.5e-16 | 1.5e-13 | 50.1 |
| habu1_s4826_g14842.t1 | 4 | 4 | EF-hand_1 | 141 | 168 | 2.5e-27 | 92.0 | 3.2e-12 | 3.2e-09 | 35.4 |
| habu1_s4826_g14842.t1 | 3 | 3 | EF-hand_6 | 142 | 168 | 9.9e-22 | 74.8 | 2.5e-07 | 0.00025 | 20.6 |
| habu1_s4826_g14842.t1 | 2 | 2 | EF-hand_5 | 142 | 164 | 1.9e-12 | 45.9 | 2.2e-06 | 0.0022 | 17.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s4826_g14842.t1 | gi|602649853|ref|XP_007431327.1| | PREDICTED: centrin-1-like [Python bivittatus] | 0.0 |
| habu1_s4826_g14842.t1 | gi|224049221|ref|XP_002188451.1| | PREDICTED: caltractin [Taeniopygia guttata] | 0.0 |
| habu1_s4826_g14842.t1 | gi|524993735|ref|XP_005044694.1| | PREDICTED: centrin-1-like [Ficedula albicollis] | 0.0 |
| habu1_s4826_g14842.t1 | gi|543375475|ref|XP_005530950.1| | PREDICTED: centrin-1-like [Pseudopodoces humilis] | 0.0 |
| habu1_s4826_g14842.t1 | gi|729754308|ref|XP_010573878.1| | PREDICTED: caltractin [Haliaeetus leucocephalus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 4.9 |
| Venom grand-1 | 0.8 |
| Pit, infrared sensing | 4.6 |
| Nose | 20.2 |
| Brain-1 | 0.7 |
| Eye | 2.4 |
| fetal fibroblast | 2.9 |
| venom gland-2 | 0.6 |
| Brain-2 | 0.8 |
| Spleen | 1.7 |
| Lung | 4.0 |
| Liver | 0.7 |
| Kidney | 0.6 |
| Pancreas | 0.1 |
| Small intestine | 1.0 |
| Large intestine | 1.2 |
| Stomach | 1.0 |
| heart | 1.4 |
| ovary | 80.9 |
| cheek muscle | 2.6 |
Transcript
| Transcript ID | habu1_s4826_g14842.t1 |
|---|---|
| Definition | - |
>habu1_s4826_g14842.t1 gcgtttcttgattggccttggtaacgaatagacgcgagttttcgcggcaatcttttctgtgattggacaatccaggcaca gagaggcggaacgtaatcaatttttgcaggtggtttggtttgtgtggtttcttgaataagtgaacccagctattgtaaga taatggcatctggatacaaaaaaccaagtttgagtggctcccatcgtcggaaaagcagtgggttaaaacatgagctttct gaagatcagaagcaggagatcagagaagcttttgatttgtttgatactgaggggtgcggtagcattgatatcaaagaact gaaggttgcaatgcgtgctcttggttttgagccaaagaaagaagaaattaaaaagatgatagcagacattgggaaagatg gaagcagcaccctaaactttgaagactttttaacaatgatgaccaccaaaatgaatgaaaaagattctaaagaagaaatt ctgaaagctttccgactgtttgacgatgatggtacaggcaagatttcctttaaaaacctaaagcgagtttccaaagaact tggggaaaatttaacagatgaagaactgcaggaaatgatagatgaagctgatcgtgatggagatggagaaataaatgagg aagaattcttgaaaatcatgaagaagaccaatctatattagtgggtttttacctttaacaatgacttgaaagttataaac gtgtttactgttttataatgtacaaaagggtatttggttgggagggattttttaaatcagaaacttattgtttataccat tgtgataaagtaatgattcatgcatgctagaaagcttgttgcacataagaaaacaggcctgttatttccttaatttgaag gacatggtaacaaaactgttttgaaaataaagttataccgtaatatgcatgca |
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Protein
| Protein ID | habu1_s4826_g14842.t1 |
|---|---|
| Definition | - |
>habu1_s4826_g14842.t1 MASGYKKPSLSGSHRRKSSGLKHELSEDQKQEIREAFDLFDTEGCGSIDIKELKVAMRALGFEPKKEEIKKMIADIGKDG SSTLNFEDFLTMMTTKMNEKDSKEEILKAFRLFDDDGTGKISFKNLKRVSKELGENLTDEELQEMIDEADRDGDGEINEE EFLKIMKKTNLY |
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