Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s4826_g14844
Locus habu1_scaffold4826 : 825019 ... 838036 : -
To GenomeBrowser habu1_scaffold4826:825019..838036
Genes list of scaffold habu1_scaffold4826

Annotation by Blast2GO
Annotation GO
adenosine deaminase domain-containing protein 1 EC:3.5.4.4 GO:0003723 GO:0004000 GO:0005634 GO:0006144 GO:0006396 GO:0007286

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s4826_g14844.t2 1 1 dsrm 105 170 3.0e-09 37.3 1.4e-12 1.0e-08 35.6
habu1_s4826_g14844.t2 1 1 A_deamin 263 583 0.0 258.3 0.0 0.0 257.3

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.0
Venom grand-1 0.1
Pit, infrared sensing 0.0
Nose 0.1
Brain-1 0.0
Eye 0.0
fetal fibroblast 0.1
venom gland-2 0.0
Brain-2 0.0
Spleen 0.1
Lung 0.0
Liver 0.1
Kidney 0.0
Pancreas 0.0
Small intestine 0.1
Large intestine 0.1
Stomach 0.2
heart 0.0
ovary 27.3
cheek muscle 0.1

Transcript
Transcript IDhabu1_s4826_g14844.t1
Definition-
>habu1_s4826_g14844.t1
ccgcgctttcttttcagcttcgtgtagtttctcccgaaggcggagtttccgttggagctcgttgggtgggctaagggtga
gaaaagatggcaaatgactgggtttctagagtacctagttttgctcaaatgttgaagaagaacttgcctgcccagccatc
tcaaccttctgccccgtcttcgtctcacagtggtttgtttcggcaagcggagaatgctaaaccggtgtttttaatcccag
aaacatccagtgtatcaaacttggcatctagggtgacccctattacaggtcatgactatcaatatactaaaactgtgcct
gtagttccaattacttcacttcctcccaagaaaattccaaaggaatttattacaaaatacaaacgaggagagatcaaccc
agtctcagctttgcatcagttttcacaaatgcagcgtgtacagcttgaattaaaggaaactgtggcaacaggaaatctct
tgggaacttactttgctttttgtgctgtagttgatggcattcagtataagactggattgggccaaaataaaaaggaatca
aaatcaaatgcagcaaaacttgctcttgatgaacttctgcaattggaagaggcagaaccaaaagctttagaaaacccagg
tcctgtcagaaattttgctgaaactatacatgcaaccaaacctcaaataacaacagaatctgcttattttacaaagattc
attatgagggacagcatcccgcacatagaaaaatttctcaagttgtcaaagaaacattcgataatttggtggctaagcat
ccagagtaccagagttgtagcagttcagtagctgccttcataattgaaagagctacacaatatgaagtggtagctgttgg
aacaggtgaatttaactatagccaatgcagtcatcctgatggaagagttttgcatgatagtcatgcaattgttactgcaa
ggcgctctctacttaggtatttttatagacagcttttactttactacagtaaaaaccctgctatgatggacaaatccata
ttttgtactgaaccaacatctaacctgcttgcattaaaaccgaatgtaaaattatttctctacatgaatcagttgccaaa
aggatctgctcggataaagtccaagctacacctcaatccaaactcagtgtctgcatttgaagctgatgaagaactgtgtc
ttcatgtggttgttgaaggcaaggtttatctcacagctttttgtcctgctgaaattgccacaataagcagcatgtctacc
agtgataaactgaccaggtgggaagtattgggtgttcaaggagccctactgagtcacttcattcagccagtttatgttag
cacaataattcttggggacacaaactgctgtagtacaagaggattagaaatagccatcaaacagcgcatagatgatgcac
ttagtaaaaaccttcccatgttctatcttgtgaatagacctcatattaatttggcaactgctgcataccctgtgcagatt
gacctggagcataggtctcttagtgtgaattggtcacaaggagacttatcattggaggtgatagatggattaaatggaaa
aatcattggaagttcacccttcaaaagtggtatttcaatggcaagtcgtctttgcaaagctgcaatgttaagtcgcttta
agttagtggttaaagaatcaaagagagaagatttacttaaagcaacaacttaccatgaagcaaagattatggcagaatct
taccaagggacaaaatacttgctgaaatcctacttggagcaacatggttatggatcttggattgtgaagtctccacacat
tgaacatttcagcatgtaaaaggttaatataccagctctatgacctgttgaaataagcttttgctctgagaataattttt
taattggttaaagatttagatcagtgctgactagtaatatgagctgatagataaaaaatgtgcataaacataagcaaaat
aaatatactatttagttaatatatg
Transcript IDhabu1_s4826_g14844.t2
Definition-
>habu1_s4826_g14844.t2
gtggggttctagaactccggaggtgagaaaagatggcaaatgactgggtttctagagtacctagttttgctcaaatgttg
aagaagaacttgcctgcccagccatctcaaccttctgccccgtcttcgtctcacagtggtttgtttcggcaagcggagaa
tgctaaaccggtgtttttaatcccagaaacatccagtgtatcaaacttggcatctagggtgacccctattacaggtcatg
actatcaatatactaaaactgtgcctgtagttccaattacttcacttcctcccaagaaaattccaaaggaatttattaca
aaatacaaacgaggagagatcaacccagtctcagctttgcatcagttttcacaaatgcagcgtgtacagcttgaattaaa
ggaaactgtggcaacaggaaatctcttgggaacttactttgctttttgtgctgtagttgatggcattcagtataagactg
gattgggccaaaataaaaaggaatcaaaatcaaatgcagcaaaacttgctcttgatgaacttctgcaattggaagaggca
gaaccaaaagctttagaaaacccaggtcctgtcagaaattttgctgaaactatacatgcaaccaaacctcaaataacaac
agaatctgcttattttacaaagattcattatgagggacagcatcccgcacatagaaaaatttctcaagttgtcaaagaaa
cattcgataatttggtggctaagcatccagagtaccagagttgtagcagttcagtagctgccttcataattgaaagagct
acacaatatgaagtggtagctgttggaacaggtgaatttaactatagccaatgcagtcatcctgatggaagagttttgca
tgatagtcatgcaattgttactgcaaggcgctctctacttaggtatttttatagacagcttttactttactacagtaaaa
accctgctatgatggacaaatccatattttgtactgaaccaacatctaacctgcttgcattaaaaccgaatgtaaaatta
tttctctacatgaatcagttgccaaaaggatctgctcggataaagtccaagctacacctcaatccaaactcagtgtctgc
atttgaagctgatgaagaactgtgtcttcatgtggttgttgaaggcaaggtttatctcacagctttttgtcctgctgaaa
ttgccacaataagcagcatgtctaccagtgataaactgaccaggtgggaagtattgggtgttcaaggagccctactgagt
cacttcattcagccagtttatgttagcacaataattcttggggacacaaactgctgtagtacaagaggattagaaatagc
catcaaacagcgcatagatgatgcacttagtaaaaaccttcccatgttctatcttgtgaatagacctcatattaatttgg
caactgctgcataccctgtgcagattgacctggagcataggtctcttagtgtgaattggtcacaaggagacttatcattg
gaggtgatagatggattaaatggaaaaatcattggaagttcacccttcaaaagtggtatttcaatggcaagtcgtctttg
caaagctgcaatgttaagtcgctttaagttagtggttaaagaatcaaagagagaagatttacttaaagcaacaacttacc
atgaagcaaagattatggcagaatcttaccaagggacaaaatacttgctgaaatcctacttggagcaacatggttatgga
tcttggattgtgaagtctccacacattgaacatttcagcatgtaaaaggttaatataccagctctatgacctgttgaaat
aagcttttgctctgagaataattttttaattggttaaagatttagatcagtgctgactagtaatatgagctgatagataa
aaaatgtgcataaacataagcaaaataaatatactatttagttaatatatg

Protein
Protein IDhabu1_s4826_g14844.t1
Definition-
>habu1_s4826_g14844.t1
MANDWVSRVPSFAQMLKKNLPAQPSQPSAPSSSHSGLFRQAENAKPVFLIPETSSVSNLASRVTPITGHDYQYTKTVPVV
PITSLPPKKIPKEFITKYKRGEINPVSALHQFSQMQRVQLELKETVATGNLLGTYFAFCAVVDGIQYKTGLGQNKKESKS
NAAKLALDELLQLEEAEPKALENPGPVRNFAETIHATKPQITTESAYFTKIHYEGQHPAHRKISQVVKETFDNLVAKHPE
YQSCSSSVAAFIIERATQYEVVAVGTGEFNYSQCSHPDGRVLHDSHAIVTARRSLLRYFYRQLLLYYSKNPAMMDKSIFC
TEPTSNLLALKPNVKLFLYMNQLPKGSARIKSKLHLNPNSVSAFEADEELCLHVVVEGKVYLTAFCPAEIATISSMSTSD
KLTRWEVLGVQGALLSHFIQPVYVSTIILGDTNCCSTRGLEIAIKQRIDDALSKNLPMFYLVNRPHINLATAAYPVQIDL
EHRSLSVNWSQGDLSLEVIDGLNGKIIGSSPFKSGISMASRLCKAAMLSRFKLVVKESKREDLLKATTYHEAKIMAESYQ
GTKYLLKSYLEQHGYGSWIVKSPHIEHFSM
Protein IDhabu1_s4826_g14844.t2
Definition-
>habu1_s4826_g14844.t2
MANDWVSRVPSFAQMLKKNLPAQPSQPSAPSSSHSGLFRQAENAKPVFLIPETSSVSNLASRVTPITGHDYQYTKTVPVV
PITSLPPKKIPKEFITKYKRGEINPVSALHQFSQMQRVQLELKETVATGNLLGTYFAFCAVVDGIQYKTGLGQNKKESKS
NAAKLALDELLQLEEAEPKALENPGPVRNFAETIHATKPQITTESAYFTKIHYEGQHPAHRKISQVVKETFDNLVAKHPE
YQSCSSSVAAFIIERATQYEVVAVGTGEFNYSQCSHPDGRVLHDSHAIVTARRSLLRYFYRQLLLYYSKNPAMMDKSIFC
TEPTSNLLALKPNVKLFLYMNQLPKGSARIKSKLHLNPNSVSAFEADEELCLHVVVEGKVYLTAFCPAEIATISSMSTSD
KLTRWEVLGVQGALLSHFIQPVYVSTIILGDTNCCSTRGLEIAIKQRIDDALSKNLPMFYLVNRPHINLATAAYPVQIDL
EHRSLSVNWSQGDLSLEVIDGLNGKIIGSSPFKSGISMASRLCKAAMLSRFKLVVKESKREDLLKATTYHEAKIMAESYQ
GTKYLLKSYLEQHGYGSWIVKSPHIEHFSM

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Okinawa Institute of Science and Technology
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