Gene
| Gene Model ID | habu1_s4826_g14848 |
|---|---|
| Locus | habu1_scaffold4826 : 1061097 ... 1100584 : + |
| To GenomeBrowser | habu1_scaffold4826:1061097..1100584 |
| Genes list of scaffold | habu1_scaffold4826 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| bardet-biedl syndrome 7 protein | GO:0001103 GO:0001654 GO:0005634 GO:0005813 GO:0005930 GO:0006357 GO:0007224 GO:0007420 GO:0007507 GO:0008104 GO:0016020 GO:0032436 GO:0034464 GO:0035058 GO:0036064 GO:0045444 GO:0060021 GO:0060173 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s4826_g14848.t1 | 1 | 1 | Cyclin_N | 856 | 981 | 0.0 | 165.5 | 0.0 | 0.0 | 164.4 |
| habu1_s4826_g14848.t1 | 1 | 1 | Cyclin_C | 984 | 1100 | 2.4e-23 | 82.3 | 7.5e-27 | 2.8e-23 | 82.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s4826_g14848.t1 | gi|327274164|ref|XP_003221848.1| | PREDICTED: Bardet-Biedl syndrome 7 protein [Anolis carolinensis] | 0.0 |
| habu1_s4826_g14848.t1 | gi|530593467|ref|XP_005290336.1| | PREDICTED: Bardet-Biedl syndrome 7 protein [Chrysemys picta bellii] | 0.0 |
| habu1_s4826_g14848.t1 | gi|558173687|ref|XP_006125651.1| | PREDICTED: Bardet-Biedl syndrome 7 protein [Pelodiscus sinensis] | 0.0 |
| habu1_s4826_g14848.t1 | gi|557260087|ref|XP_006015695.1| | PREDICTED: Bardet-Biedl syndrome 7 protein [Alligator sinensis] | 0.0 |
| habu1_s4826_g14848.t1 | gi|564248833|ref|XP_006263499.1| | PREDICTED: Bardet-Biedl syndrome 7 protein [Alligator mississippiensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.0 |
| Venom grand-1 | 0.7 |
| Pit, infrared sensing | 2.2 |
| Nose | 3.7 |
| Brain-1 | 1.5 |
| Eye | 2.8 |
| fetal fibroblast | 12.2 |
| venom gland-2 | 0.8 |
| Brain-2 | 1.4 |
| Spleen | 1.4 |
| Lung | 1.2 |
| Liver | 0.1 |
| Kidney | 1.3 |
| Pancreas | 0.8 |
| Small intestine | 0.4 |
| Large intestine | 1.1 |
| Stomach | 1.0 |
| heart | 2.5 |
| ovary | 38.0 |
| cheek muscle | 2.4 |
Transcript
| Transcript ID | habu1_s4826_g14848.t1 |
|---|---|
| Definition | - |
>habu1_s4826_g14848.t1 gcgcaccgcctccaattaaaaaccagggcattgtcgggtttacgcaaatctgcctcgtcaccatagtaacgagaggcctg gagatagtttttaggccataagctttcgctatactgatgcccgcggagaactggaaagaggaagccgaagccagccttgg taacttgcccattgcccattgccatggaactgagtctgaaccggatggattacctgcaggtaggtgtgatatctcagaaa accatgaagttgctccctgcatcaggacgcaaagctacacagaaggttgttactggagaccatgatggtgttattacctg ctttggaataaaaaaaggagaagctattccagtattcaagaccttgccaggagaaaagattgcaagattagaactgggag gtgctcttaatactcttcaggagaaaatttttgtggctgctggttctgaggttcgaggtttcacaaaaaaagggaaacag ttcctttcatttaacaccaacctcactgaaaacatcaaagctatgtatatatctggatcagatctctttcttggtgcaag ctacatttataaccattactgtgactgtaaggatcagcactattatttatcgggggataaaatcaacgatgttctctgtc ttccaccagataaactgtcttgcattataccggtattagcatgtcaagatagagttcttagagttttgcagggttcagat ttactgtatgaaatggaggtcccaggtccacctgctgttctggccttgaacaatggaaatggtggtgactctggtgaaga agttttgtttgggacatctgatggcaaaattggcttggtacagattactggtgtttctccagtagaaaaatggaaaattg gaaatgagaaaaaaagaggtggcatcttatgtatggatagttttgacattttgggagatggtgttaaagaattgctcatt ggtagagatgatggaatgttagaaatctataaatttgaaactgaaaagagccctgttctcaaatatgaatgtgctttgtc agagagtgtcacatccatccaaggtggctgtgttggaaaagagggctatgatgagattgtagcatcaacattttcaggat gggtgtctggattaactacagaatctattcatggagaatgtggattagatgaattaaaattgactcatgaaatgcagaat aaagttttgtccttaaggaatgaattggatcagttacagatgaaagtacttcaagaacgtgaaaaataccagcaatcttc tcagtccagcactgctatttcagcagtcccaacgttcagtataaatgataaatttgcattaaacaaagatgatgccagct acagccttgttttagaagtccaggcagcgattgatattgtcttgttacagtgtgatgttcctatagatctaaaggatgtg gataaaaattcagctgtggtcagttttactgactgtgaatctgagccaaatggtaacttcctccttgctacttatcggtg tcaagtacataccacccgaatagaacttaagattctatcaattgaaggtcgctatggaacgctgcaagcatatgtcattc caagagttcaacctaaaacttgtcaagttcggcagtatcagattaagcctctttcacttcatcagaggacacgttgcctt gaccatgatagacccatgaatacattgactctcaaaggacagttcagttttgctgaagtacattcctggattgtattttg tttgcctgaagttcctgaaaagacaccagtgggggagaatgtcagcttctactttcagaacacttttttggatactcagc ttgaatgtacttaccggaaaggtgagggttatttcaaatctgacaatatatccacaatatccatcctcaaggatgtactc tctaaagaagccactaaaaggaaaattaacctcaatatatcatgtgatatgaatgaagcatctgtgaatcatacattaaa tcttatccatccaaaattagagtaccagttgatgttggctaaaaaagttgaactaatagatgctttaaaagaattgcagg ctcatgaaggtaacatggatttcctgattccggaataccgcaatattttggaagagtcagatcagttggtcaaagaacac aagaaacagccaacatctcttgaaagactttatggtatgattactgatttgttcatagacaaatttaagttcaaagctca gtttgcgggtcccactgtcagcacagccatcatgctgacgggcacctcagtggacctggagaaccaggaaaatgtgccgc cgggggcaaaagaggctcccaaggttgcgggtgctcctggacaccgactggcgctggggcttctgcaagctaatcaacgc cgctccacccagccacaggctccccatagtcaaataccttggagtacaaatgatgagaattatcttggtgtcctcaatgg taaaatgggaaacaaacagccagcttttactatccacttggatgagcctgataacaggagacaaaagaaacatatgtcca gcaaaaagatctcatcctgtgaagagaccataggcttgaaggcagttgttgcttcaatggaaaccagaaaacctcttact cctatagataatccaatggatcttagttctgggtcactgagtattatggatatgtcaatagaagcagaacagaaaattaa tgtaaaccatgtcccagattatattgaggatatctataagtatcttagagaaatggaggtgaaatgcaaacccaaagtgg gttatatgaagaaacagcctgatattacaaataatatgcgggctattcttgtggactggctagtggaagttggtgaagaa tacaaactacaaaatgaaaccttgcatttggctgtaaattacatcgataggtttctctcttcaatgtcagtgctacgagg aaaacttcagcttgtgggaactgcagctatgctgttggcatcaaagtttgaagaaatctaccctccagaagtagcagaat ttgtttatatcacagatgacacttacacaaagaaacaagttctcagaatggagcacttagtcctgaaagttctgtcattt gatctggcagctcctacaataaatcaattcctttctcaatacttcttacatcagcctgcctgctccctagtggaaaactt agcaatgtatttgggtgaactaagtttaattgatgcagacacgtatctgaaatacttgccatcagtaatagcagcagcag catttcatatagcaaactatgcaatttctgggaaaacgtgggcagatcctcttgctgcaatgacaggatatacaattgaa actattaagccttgtctcttagacctccacaaaacctactgcagagcagcacagcatacacaacagtctatcagagagaa atacaagactgtaaaataccatgcggtgtcgctcattgacccaccagagacgttagatttattataatataagtgagatt tcaaacctatatattgtccattgtaaatgtacagttttaaatgtgtagatttcaatcaatctggtatattaccatagcta attatgaggttttatacttttataacgttttaatataaacttttgtacatgcaatcttg |
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Protein
| Protein ID | habu1_s4826_g14848.t1 |
|---|---|
| Definition | - |
>habu1_s4826_g14848.t1 MELSLNRMDYLQVGVISQKTMKLLPASGRKATQKVVTGDHDGVITCFGIKKGEAIPVFKTLPGEKIARLELGGALNTLQE KIFVAAGSEVRGFTKKGKQFLSFNTNLTENIKAMYISGSDLFLGASYIYNHYCDCKDQHYYLSGDKINDVLCLPPDKLSC IIPVLACQDRVLRVLQGSDLLYEMEVPGPPAVLALNNGNGGDSGEEVLFGTSDGKIGLVQITGVSPVEKWKIGNEKKRGG ILCMDSFDILGDGVKELLIGRDDGMLEIYKFETEKSPVLKYECALSESVTSIQGGCVGKEGYDEIVASTFSGWVSGLTTE SIHGECGLDELKLTHEMQNKVLSLRNELDQLQMKVLQEREKYQQSSQSSTAISAVPTFSINDKFALNKDDASYSLVLEVQ AAIDIVLLQCDVPIDLKDVDKNSAVVSFTDCESEPNGNFLLATYRCQVHTTRIELKILSIEGRYGTLQAYVIPRVQPKTC QVRQYQIKPLSLHQRTRCLDHDRPMNTLTLKGQFSFAEVHSWIVFCLPEVPEKTPVGENVSFYFQNTFLDTQLECTYRKG EGYFKSDNISTISILKDVLSKEATKRKINLNISCDMNEASVNHTLNLIHPKLEYQLMLAKKVELIDALKELQAHEGNMDF LIPEYRNILEESDQLVKEHKKQPTSLERLYGMITDLFIDKFKFKAQFAGPTVSTAIMLTGTSVDLENQENVPPGAKEAPK VAGAPGHRLALGLLQANQRRSTQPQAPHSQIPWSTNDENYLGVLNGKMGNKQPAFTIHLDEPDNRRQKKHMSSKKISSCE ETIGLKAVVASMETRKPLTPIDNPMDLSSGSLSIMDMSIEAEQKINVNHVPDYIEDIYKYLREMEVKCKPKVGYMKKQPD ITNNMRAILVDWLVEVGEEYKLQNETLHLAVNYIDRFLSSMSVLRGKLQLVGTAAMLLASKFEEIYPPEVAEFVYITDDT YTKKQVLRMEHLVLKVLSFDLAAPTINQFLSQYFLHQPACSLVENLAMYLGELSLIDADTYLKYLPSVIAAAAFHIANYA ISGKTWADPLAAMTGYTIETIKPCLLDLHKTYCRAAQHTQQSIREKYKTVKYHAVSLIDPPETLDLL |
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