Gene
| Gene Model ID | habu1_s4826_g14849 |
|---|---|
| Locus | habu1_scaffold4826 : 1102066 ... 1120066 : - |
| To GenomeBrowser | habu1_scaffold4826:1102066..1120066 |
| Genes list of scaffold | habu1_scaffold4826 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| exosome complex component rrp45 | GO:0000178 GO:0005730 GO:0005737 GO:0017091 GO:0030307 GO:0043928 GO:0044822 GO:0045111 GO:0071028 GO:0071035 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s4826_g14849.t1 | 1 | 1 | RNase_PH | 32 | 163 | 3.1e-21 | 76.0 | 1.2e-24 | 5.7e-21 | 75.2 |
| habu1_s4826_g14849.t1 | 1 | 1 | RNase_PH_C | 189 | 252 | 5.8e-11 | 42.1 | 3.0e-14 | 1.5e-10 | 40.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s4826_g14849.t1 | gi|602661455|ref|XP_007436381.1| | PREDICTED: exosome complex component RRP45 [Python bivittatus] | 0.0 |
| habu1_s4826_g14849.t1 | gi|327274166|ref|XP_003221849.1| | PREDICTED: exosome complex component RRP45 [Anolis carolinensis] | 0.0 |
| habu1_s4826_g14849.t1 | gi|729754292|ref|XP_010573869.1| | PREDICTED: exosome complex component RRP45 isoform X1 [Haliaeetus leucocephalus] | 0.0 |
| habu1_s4826_g14849.t1 | gi|557260052|ref|XP_006015679.1| | PREDICTED: exosome complex component RRP45 isoform X1 [Alligator sinensis] | 0.0 |
| habu1_s4826_g14849.t1 | gi|594638334|ref|XP_007172463.1| | PREDICTED: exosome complex component RRP45 isoform X1 [Balaenoptera acutorostrata scammoni] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 6.9 |
| Venom grand-1 | 7.3 |
| Pit, infrared sensing | 8.8 |
| Nose | 8.2 |
| Brain-1 | 5.3 |
| Eye | 6.3 |
| fetal fibroblast | 23.3 |
| venom gland-2 | 7.2 |
| Brain-2 | 5.7 |
| Spleen | 8.5 |
| Lung | 7.1 |
| Liver | 8.4 |
| Kidney | 7.5 |
| Pancreas | 5.8 |
| Small intestine | 6.1 |
| Large intestine | 6.3 |
| Stomach | 5.8 |
| heart | 10.1 |
| ovary | 29.9 |
| cheek muscle | 9.0 |
Transcript
| Transcript ID | habu1_s4826_g14849.t1 |
|---|---|
| Definition | - |
>habu1_s4826_g14849.t1 cgttgatgacgtctggaaaacacagacgggtaaagaaaggaacgcgaccatttgaagacgaggcgaagcagtagctgcta tgaaggaaacgccactctctaattgtgagaagcggttcttgctccgggctatcgaggaaaggaagcgtctggatgggcga cagtgctacgattacagaaaccttcgcatttcttttggtgttgactatggctgctgtattgtggagcttggaaaaacgag agttcttgggcaagtgtcatgtgaacttgtctccccaaagccaaatcgtgcaacggaaggcatacttttctttaatctag agctgtcacccatggcatcaccagcttttgaacctggaaggcaatctgaattgcttgtaaaactgaatcggctgctagaa agatgcctaaggaactccaagtgtgtagatactgaatctctttgtgttgttgctggtgaaaaggtgtggcaaattcgtgt ggacctgcatttgctgaatcataatggaaacattattgatgctgcaagtatagcagcaatagtggcactatgccactttc ggaggcctgatgtttcagtccaaggagaagaagtaacattgtatacacctgaagaaagggatcctgtccctctgagtatc catcacatgcctatttgtgtaagctttgcttttttccagcaagggacttacttactagtggatcccagtgaacaagagga acgtgtaatggatggcctccttgtaatagccatgaacaaacaccgtgaaatctgcaccattcaatccagtggtggaataa tgctactaaaagaacaggttttgagatgcagcaaaataacaggagtcaaagtagcagaaatcactgagttaattcaaaaa gctttggaaaatgataaaaaagttaggaaagaaggtggaaaatatggatttgctgaatctattcctaatgaaagaataac tgcctttaaaatagcacaaacctcagtcaatactaatgatgtacaagagcaagctgaagaaataattgccagagcatttc ctcctccagaagtcttgtccaagcctgtattatgggcctcaggcacagctcagattggagaaggacttcagaactcgtgg gcagattttgaggaatctgaaatggaagatgaagatggccaggacgaacctctaacagtagaagaccaaaatatagagat gggagatgttcgtattggaaccaaaaatcagaaagaagaggcgattgtattatcggacagtgaagaagaggatgttgtta ttctagaacctgaagtaacaccaaagaacagaagaaaccagaaattagaaaccacaaagaaaaacccagctggcaaaaat aagaaaaaacgaacagtttgttaaaagtaatcttattttttgtgtgttctgttaaacttttcctgcttaaaagaaacatc atttgtattatgcaattcataggaatactgtatgtctttgtatatattattaattttctaataaactttataatgctgag ataaaat |
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Protein
| Protein ID | habu1_s4826_g14849.t1 |
|---|---|
| Definition | - |
>habu1_s4826_g14849.t1 MKETPLSNCEKRFLLRAIEERKRLDGRQCYDYRNLRISFGVDYGCCIVELGKTRVLGQVSCELVSPKPNRATEGILFFNL ELSPMASPAFEPGRQSELLVKLNRLLERCLRNSKCVDTESLCVVAGEKVWQIRVDLHLLNHNGNIIDAASIAAIVALCHF RRPDVSVQGEEVTLYTPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPSEQEERVMDGLLVIAMNKHREICTIQSSGGI MLLKEQVLRCSKITGVKVAEITELIQKALENDKKVRKEGGKYGFAESIPNERITAFKIAQTSVNTNDVQEQAEEIIARAF PPPEVLSKPVLWASGTAQIGEGLQNSWADFEESEMEDEDGQDEPLTVEDQNIEMGDVRIGTKNQKEEAIVLSDSEEEDVV ILEPEVTPKNRRNQKLETTKKNPAGKNKKKRTVC |
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