Gene
| Gene Model ID | habu1_s4904_g14927 |
|---|---|
| Locus | habu1_scaffold4904 : 219373 ... 300905 : - |
| To GenomeBrowser | habu1_scaffold4904:219373..300905 |
| Genes list of scaffold | habu1_scaffold4904 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| sodium-dependent proline transporter isoform x1 | GO:0005328 GO:0005634 GO:0006355 GO:0006812 GO:0006836 GO:0007275 GO:0016021 GO:0043565 GO:0055085 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s4904_g14927.t1 | 1 | 1 | Homeobox | 39 | 94 | 9.5e-21 | 73.1 | 4.3e-24 | 1.6e-20 | 72.4 |
| habu1_s4904_g14927.t1 | 1 | 1 | SNF | 168 | 692 | 0.0 | 751.3 | 0.0 | 0.0 | 751.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s4904_g14927.t1 | gi|602649121|ref|XP_007430971.1| | PREDICTED: sodium-dependent proline transporter [Python bivittatus] | 0.0 |
| habu1_s4904_g14927.t1 | gi|637269699|ref|XP_008103037.1| | PREDICTED: sodium-dependent proline transporter isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s4904_g14927.t1 | gi|637269703|ref|XP_008103038.1| | PREDICTED: sodium-dependent proline transporter isoform X2 [Anolis carolinensis] | 0.0 |
| habu1_s4904_g14927.t1 | gi|530608409|ref|XP_005295868.1| | PREDICTED: sodium-dependent proline transporter isoform X1 [Chrysemys picta bellii] | 0.0 |
| habu1_s4904_g14927.t1 | gi|591354400|ref|XP_007071556.1| | PREDICTED: sodium-dependent proline transporter [Chelonia mydas] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.0 |
| Nose | 0.0 |
| Brain-1 | 4.7 |
| Eye | 0.1 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 5.5 |
| Spleen | 0.0 |
| Lung | 0.0 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 1.4 |
| Large intestine | 0.4 |
| Stomach | 0.0 |
| heart | 0.0 |
| ovary | 0.0 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s4904_g14927.t1 |
|---|---|
| Definition | - |
>habu1_s4904_g14927.t1 acggcgcaggagccccttcttctgtcgccagtccggggcagctaggatacagccccccggatttcaatccaattccgcca cccggctctggactactgcctccgcccatgagcgccccagtcccccagctctccccaaacgcgcaaaggcgcacgcctta tgagtggatgagacgccacgttcccactagcagcaacagtggcaaaaccagaacaaaagacaaataccgtgttgtatata cagaccaccagcgactggaactggagaaggaattccactatagtcgctacatcaccatccggcggaaagcagagctggca gcagcccttggactcactgagcggcaggtgaaaatctggttccagaaccggcgagcaaaggagaggaaagtgaacaagaa gaagatgcagcagcaaacgcagcctgccagtacaaccacacctaccccaccagcgggtttgagatacagaatagcagctt taggtgtctcgcccttgcatttgagaacagtaaaaggaatatcttgtttctggccagtcattccagatttgttaatgact cctagtgaccaaggagatggtgacctagagaccgaatatcctgaagacagaggaaattggacaggcaagctggatttcct tttgtcttgtattggctactgcgttggattggggaatgtttggagattcccatatcgtgcctatacaaatgggggagggg cattcctcgttccttatttcattatgttggctatatgtgggatacccatcttcttcatggaactgtcgttaggccagttc tcaagcctcgggcctctggctgtttggaagataagcccactcttcaaaggtattggtatggccacaatcctgattgtctc cttggtggccatttactataacatgatcattgcctatgttctcttctacctctttgcctcgttgaccaacaacttgcctt ggcagtactgcggcaactggtggaacacagacctgtgcctggaccaccatgtcacgcacacaggaaacagtgctgttcct ttcaacacttctaacactgtcagtccaagtgaggaatattggaaccgctatgtcctccatatccaaggaagttcaggcat tggggatcctggcagcattcgctggaatctctgtctctgcctcctgctagcttggctcattgtgtatctttgcatcttaa agggagtcaaatcttctggcaaggttgtttatttcacggccacatttccttacctcattctgatcatgctcctgattcgt ggggtgacacttgagggagcctggctaggaatcaagttctatctcacaccccagtttgacctcctactgtctcccaaggt gtggattgaagcagctttgcagatcttctattctcttggggtaggatttgggggacttctcacctttgcatcatataata ccttccaccagaatatttacagggatacatttatagtcactgtggggaatgctgttaccagcattttggctggctttgcc attttttctgttttgggatacatgtcccaagaacttgatgttcctgttcaggaagttgccaaagcaggtccagggttggc ttttgtagtgtatccacaagccatgacaatgcttcctctttctcctttctggtcttttctcttcttcttcatgctgttga ctcttggcctggatagtcagtttgcctttctagagaccattgttactgcagtgacagatgagttcccatattacctgcgg ccaaagaaggcttttttctcaggcatcatttgtgttgcaatgtttctaatggggctcattctcacaacggagggtggaat gtactggttggtgctgctggatgattacagtgctgggttgggtctcatggtggtggtcataactacctgtctggtagtga cacgtgtttacggcatgaaaagattttgccgtgacattcacatgatgctgggtttcaaaccagggatatactttagggcc tgctggttgttcctgtctccagtaacaatgacggccctgcttgtgtacagcattatcaaataccagccttcaaagtacaa tgggacttactgctttccattttgggctgaggctctgggcatcctaatggggatcttctcttgcctgatgatccccatgg gaatgctgtttgctgtgcttcgagaagaagggacactctggcaaagaatccagcaagctagcagaccaacaatggattgg ggtccttctctggaagaaaacagaactggcatgtatgtagcaaccctggcaggtagccagtctcctaaacccttgatggt ccatatgagaaaatatggagggataactagctatgaaaacatagcttttcaaattgataaagagatggaagaggatgaag aagaatctgtcatatgaagaaaaagtttacctattcacatgaggtgatggaaggcaaagagattgtggggaatattctgc acaactttgcactttggcacatcagtccaatcagcagtctgtttccagatacagcgaaagatggcctattcagaacttta taccagtgcatttggctgtaaatcccaatgtttttgaggtttctgttcaatgtgacaagagcttgttttagtgctttaat gcctgatgcaggtcactcatccatgttgtccttgctgctgtcaccaataatgggtttctcaaattcagaataagtatact gtatgctagctcctattgtattgatccagtctatttttcctgtagctatatgtttgcacttctttatccacaaacatcct tgttccatagaaacatagaagtttctttatccagtggaccaattctcaaaaatcttccattgttctatcttctgtggctt agtaaatggtaattttgcatagtgcctcagaagtttgaaagtagtttatggaagtgtattccttatagaaagtcagagac cttgaacatgtgtatgaattgcaagaaaatcttcaatatcacagtatgtctaaaattccaaatcaattagtctaattttt aagtctaggataaattaaaagatgtagaggaattgtttggttacaggataaccataaacttcaatgtataatgtattcag tcttgtattggcttgaaatagacatatagaagttagaaataactaacttagggtctctttttttttccaaggattaacac agtccaggaaaaaaatggaacggggaaacaaattcatgccagtaaaagaaatatgtgcaccagggaggttaagctgactg aaaaatgtctttcacatgaagatatattacaaaataataataataacaactacagccaatatttttacaaattgtttgta cagtgaccagacactttggaatctgtttataaagtgcttaatttacacctgtagagtctgtctctgaaaactgcagaaat aagagttcaaattcaagtaccggtatatgctttaatgccaagagtccatatattcactatgtatgaaaactacagtctat gtgaatgtaggaagctatttaatattgagtctgtcagatgatatacagtagctccatgtgacttaatggtattctataaa gcagtttcataccgggaaaatcactgatggagcacatatttttttgcaaataactgctgccagttattcaaggtttcaga gagcatgggactttgaagatgcaaaaaattatgtgccccaacagtgatttttcctgtatgaaattgctttatagaatacc attaagtctagatcactgttacctgtatgaagttgaagtggctacaacaattctaatgggggactttctccattcacacc tggagatgtcagaatccttgtctacaaagcattatccatattacttcttttctttctaaagaatgatagtatcataagtg gagatggtttaagttggccatatggaaaacgggtataatatggaaatgttatgatgggctggctggcaggctgcttaaat ggatgaacggatggactgaataataaaggaatggttgcatggtacaata |
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Protein
| Protein ID | habu1_s4904_g14927.t1 |
|---|---|
| Definition | - |
>habu1_s4904_g14927.t1 MSAPVPQLSPNAQRRTPYEWMRRHVPTSSNSGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAAALGLTERQ VKIWFQNRRAKERKVNKKKMQQQTQPASTTTPTPPAGLRYRIAALGVSPLHLRTVKGISCFWPVIPDLLMTPSDQGDGDL ETEYPEDRGNWTGKLDFLLSCIGYCVGLGNVWRFPYRAYTNGGGAFLVPYFIMLAICGIPIFFMELSLGQFSSLGPLAVW KISPLFKGIGMATILIVSLVAIYYNMIIAYVLFYLFASLTNNLPWQYCGNWWNTDLCLDHHVTHTGNSAVPFNTSNTVSP SEEYWNRYVLHIQGSSGIGDPGSIRWNLCLCLLLAWLIVYLCILKGVKSSGKVVYFTATFPYLILIMLLIRGVTLEGAWL GIKFYLTPQFDLLLSPKVWIEAALQIFYSLGVGFGGLLTFASYNTFHQNIYRDTFIVTVGNAVTSILAGFAIFSVLGYMS QELDVPVQEVAKAGPGLAFVVYPQAMTMLPLSPFWSFLFFFMLLTLGLDSQFAFLETIVTAVTDEFPYYLRPKKAFFSGI ICVAMFLMGLILTTEGGMYWLVLLDDYSAGLGLMVVVITTCLVVTRVYGMKRFCRDIHMMLGFKPGIYFRACWLFLSPVT MTALLVYSIIKYQPSKYNGTYCFPFWAEALGILMGIFSCLMIPMGMLFAVLREEGTLWQRIQQASRPTMDWGPSLEENRT GMYVATLAGSQSPKPLMVHMRKYGGITSYENIAFQIDKEMEEDEEESVI |
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