Gene
| Gene Model ID | habu1_s4907_g14936 |
|---|---|
| Locus | habu1_scaffold4907 : 105679 ... 114925 : - |
| To GenomeBrowser | habu1_scaffold4907:105679..114925 |
| Genes list of scaffold | habu1_scaffold4907 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| sequestosome- partial | GO:0008270 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s4907_g14936.t1 | 1 | 1 | PB1 | 19 | 93 | 2.2e-07 | 30.4 | 1.1e-10 | 4.2e-07 | 29.5 |
| habu1_s4907_g14936.t1 | 1 | 1 | ZZ | 116 | 158 | 1.6e-11 | 43.5 | 8.5e-15 | 3.2e-11 | 42.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s4907_g14936.t1 | gi|602667676|ref|XP_007439396.1| | PREDICTED: sequestosome-1, partial [Python bivittatus] | 0.0 |
| habu1_s4907_g14936.t1 | gi|641756854|ref|XP_008164674.1| | PREDICTED: sequestosome-1 isoform X1 [Chrysemys picta bellii] | 0.0 |
| habu1_s4907_g14936.t1 | gi|641756856|ref|XP_008164675.1| | PREDICTED: sequestosome-1 isoform X2 [Chrysemys picta bellii] | 0.0 |
| habu1_s4907_g14936.t1 | gi|542149505|ref|XP_005483703.1| | PREDICTED: sequestosome-1 isoform X1 [Zonotrichia albicollis] | 0.0 |
| habu1_s4907_g14936.t1 | gi|363739019|ref|XP_001233249.2| | PREDICTED: sequestosome-1 isoformX1 [Gallus gallus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 54.8 |
| Venom grand-1 | 46.6 |
| Pit, infrared sensing | 57.9 |
| Nose | 125.6 |
| Brain-1 | 43.2 |
| Eye | 46.3 |
| fetal fibroblast | 79.3 |
| venom gland-2 | 39.4 |
| Brain-2 | 47.3 |
| Spleen | 41.4 |
| Lung | 69.8 |
| Liver | 160.8 |
| Kidney | 78.9 |
| Pancreas | 37.9 |
| Small intestine | 73.4 |
| Large intestine | 62.4 |
| Stomach | 41.7 |
| heart | 68.4 |
| ovary | 126.5 |
| cheek muscle | 70.6 |
Transcript
| Transcript ID | habu1_s4907_g14936.t1 |
|---|---|
| Definition | - |
>habu1_s4907_g14936.t1 ggtgttgaatcgctgctgctgctgttgttcctcagccggcctcccgagcgccaattgttgctgcgccacagaaatccagc gccgctgccgtcgccgcgatggctcagctgacgatcaaggcctacctgctgggcaaagaagagaccacccgcgagatccg gcgcttcgccgtcgaccttcccgcccgctaccagccgatacgggagaaggtggccgagcttttccaggggctgctccgca attctgccgccgccacgggagcctttcagatgtactataaggatgaagatggtgatatgattgctttttccagtgatgag gaattgaagttggttccacccgctgtgaaagctggagttttccggatttttgttaaagaaaaaaaggagcttaagcatgt gaaccgccattcctgcaacaaggaggattctccaaacctcgtgcatcctaatgtggtctgtgatggttgtgagggcccag ttgtgggttccagattcaaatgtgcagtttgtccagactatgacctgtgcagcacttgtgagggaaaaggtatccataaa gagcataacatgatcatgtttccaagtccattcgaccagcttgagtggcttctccagggtcgctggcttcgtaaaatgag acacgacccttgctcctttcgctggatgcacggtaggggacaccggcgttttggccatcatcaccagaatcacggccagg cacaagctagtacttcttctcaaagtgatgctccagcgcgcgaagaaaccactagcagtgaagctcaagatcacaacgtc agtttcctgaagaatgttggagaaagtgttgctgcattcctgagtccacttggcattgaagtggatattgatgtagaaca tgagggtcaaagaagcaaagtatcatcacctgcgcaacctagttcggagaagagctgctccaagcctagcagtccgactg agcagaccaaaccagaagcggattctgaaaataatctagacataagtgatgctctttcaaaccaaatgcaggagatgatc gtctattctcctcctgcacagatggaagaagagactactttgtcacaggaacgaagcgaatccagtggtagttcagcagc agatgaggactggacccatttatcttcaaaggaagtagatccttcaactggtgaattgcagtccttacaaatggtagagg aagacagtccaaaatctctaaatccagtagaagctcccactaatgctggaccaacaggcttgcgagaagccgcaatgtac cctcatcttccacctgaagcagaccctcgtctgattgaatccttgtcccagatgctctcgatgggattctctgatacagg aggctggttaactcacctgctgcattccaagagctacgacattggggcagccctggatgctatccagtatgccaagcaac cgtccagttccgaatagctcttgtataactcgtagttcctaaaacattgtt |
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Protein
| Protein ID | habu1_s4907_g14936.t1 |
|---|---|
| Definition | - |
>habu1_s4907_g14936.t1 MAQLTIKAYLLGKEETTREIRRFAVDLPARYQPIREKVAELFQGLLRNSAAATGAFQMYYKDEDGDMIAFSSDEELKLVP PAVKAGVFRIFVKEKKELKHVNRHSCNKEDSPNLVHPNVVCDGCEGPVVGSRFKCAVCPDYDLCSTCEGKGIHKEHNMIM FPSPFDQLEWLLQGRWLRKMRHDPCSFRWMHGRGHRRFGHHHQNHGQAQASTSSQSDAPAREETTSSEAQDHNVSFLKNV GESVAAFLSPLGIEVDIDVEHEGQRSKVSSPAQPSSEKSCSKPSSPTEQTKPEADSENNLDISDALSNQMQEMIVYSPPA QMEEETTLSQERSESSGSSAADEDWTHLSSKEVDPSTGELQSLQMVEEDSPKSLNPVEAPTNAGPTGLREAAMYPHLPPE ADPRLIESLSQMLSMGFSDTGGWLTHLLHSKSYDIGAALDAIQYAKQPSSSE |
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