Gene
| Gene Model ID | habu1_s4907_g14937 |
|---|---|
| Locus | habu1_scaffold4907 : 174596 ... 214185 : + |
| To GenomeBrowser | habu1_scaffold4907:174596..214185 |
| Genes list of scaffold | habu1_scaffold4907 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| alpha- -mannosyl-glycoprotein 4-beta-n-acetylglucosaminyltransferase partial | GO:0006487 GO:0008375 GO:0016020 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s4907_g14937.t1 | 1 | 1 | Glyco_transf_54 | 108 | 211 | 8.4e-17 | 60.8 | 7.5e-21 | 1.1e-16 | 60.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s4907_g14937.t1 | gi|637269789|ref|XP_008103056.1| | PREDICTED: alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B isoform X2 [Anolis carolinensis] | 0.0 |
| habu1_s4907_g14937.t1 | gi|700349446|ref|XP_009918824.1| | PREDICTED: alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B, partial [Haliaeetus albicilla] | 0.0 |
| habu1_s4907_g14937.t1 | gi|602662266|ref|XP_007436778.1| | PREDICTED: alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B, partial [Python bivittatus] | 0.0 |
| habu1_s4907_g14937.t1 | gi|723122725|ref|XP_010289188.1| | PREDICTED: alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B, partial [Phaethon lepturus] | 0.0 |
| habu1_s4907_g14937.t1 | gi|699594155|ref|XP_009867530.1| | PREDICTED: alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B, partial [Apaloderma vittatum] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.3 |
| Venom grand-1 | 0.1 |
| Pit, infrared sensing | 0.5 |
| Nose | 0.9 |
| Brain-1 | 0.7 |
| Eye | 0.1 |
| fetal fibroblast | 0.3 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.5 |
| Spleen | 0.5 |
| Lung | 0.5 |
| Liver | 2.8 |
| Kidney | 1.1 |
| Pancreas | 0.3 |
| Small intestine | 0.8 |
| Large intestine | 0.1 |
| Stomach | 0.3 |
| heart | 0.3 |
| ovary | 0.6 |
| cheek muscle | 0.4 |
Transcript
| Transcript ID | habu1_s4907_g14937.t1 |
|---|---|
| Definition | - |
>habu1_s4907_g14937.t1 ggcattaaaaaggttgagaaccactgctctagatagtaaggaaaaaagtaaaaaaggggatatcctcaaaggaatgctga aacctagaagtttatagaatcagaaatctggaaaggaccttggaagtgttctagtccagggcaggagaccttattccatc aatggggcacctataattccgggacacaagctgttccattgaataactgttcttactgtcaggagctgcctaactaaggt tttaaagagaaaactccatttcatatacagtcatgtaggctttcctcaactttagcatattttttttcctttattttctg tgattcaatttattttacagtactgtgcatgaaataggcttgtgtatgtacttaacttacaagactattacaagagcatt agcttgtaagaataaacaaactcagaagggtaagttttctcttgttttgcaattgtgtcctgttgtgaggtaaatgtaca acagcagggccgtggcccactactggaccgtgacttcttggccagttgtggttttgggccgtgtgaagggatggccagtt gtggttttggttttagaaggcattgtccaagccagcaatgtgttgctcggtcattttcattatgtcattccatttccaac tgatgtaatatgtacttgcagaggcttaggaattttacctgtgctaccctcttccacgtttctggaatggtttattccaa actgtccatcaccttcagctgcaggtgatgttgtggatatctatcagcgagagttcctagcactgagagaccgtttgcat gctgcagagcaggaaagcctcaagcggtcaaaggagctgaatgtagtcctagatgaaataaagagagccatctctgaaaa gcaagccctgcgggacataaatcggacgtggagcagtttatctgtatcaatagtcatgggaatccccagtgtcaaaaggg aggtccattcatatttgacagataccctgaactccttgatctccgagctcaaccagcaggagaaggaagattctgtcatt gtcgtcatgattgctgagatccacaatataccacaggagttgcagaaaatatcaaaagctttgtcaaagtttcttcatct gacctgggcttttaaaaatgatttggaaggaaacactggtggattatttttaattattagcagagttggaaaggatgatg ggcaggagttggaagctgcagactccagaggacaggaagattagaagataatgatttcccaatgaaatacattctggtct tttagaggttatttccccttctccacacttctacccagatttctctcggctgcgagaatctttcggtgaccctaaagaaa gagtcaggtaattccaggcaatttgatttaaaattatatgctaggggtagcaaggcttgttatattttattacatggctt tataatgggtatttaaacttgtttagaagaaagcatatggcattcagaagaagtgtagtaaatagtcattgggtgcttgc tggt |
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Protein
| Protein ID | habu1_s4907_g14937.t1 |
|---|---|
| Definition | - |
>habu1_s4907_g14937.t1 MYNSRAVAHYWTVTSWPVVVLGRVKGWPVVVLVLEGIVQASNVLLGHFHYVIPFPTDVICTCRGLGILPVLPSSTFLEWF IPNCPSPSAAGDVVDIYQREFLALRDRLHAAEQESLKRSKELNVVLDEIKRAISEKQALRDINRTWSSLSVSIVMGIPSV KREVHSYLTDTLNSLISELNQQEKEDSVIVVMIAEIHNIPQELQKISKALSKFLHLTWAFKNDLEGNTGGLFLIISRVGK DDGQELEAADSRGQED |
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