Gene
| Gene Model ID | habu1_s4907_g14938 |
|---|---|
| Locus | habu1_scaffold4907 : 216516 ... 245025 : + |
| To GenomeBrowser | habu1_scaffold4907:216516..245025 |
| Genes list of scaffold | habu1_scaffold4907 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| alpha- -mannosyl-glycoprotein 4-beta-n-acetylglucosaminyltransferase b isoform x2 | GO:0006487 GO:0008375 GO:0016020 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s4907_g14938.t1 | 1 | 1 | Glyco_transf_54 | 1 | 82 | 3.1e-38 | 131.2 | 2.90069e-42 | 4.4e-38 | 130.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s4907_g14938.t1 | gi|327265426|ref|XP_003217509.1| | PREDICTED: alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s4907_g14938.t1 | gi|558228768|ref|XP_006139770.1| | PREDICTED: LOW QUALITY PROTEIN: mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme B [Pelodiscus sinensis] | 0.0 |
| habu1_s4907_g14938.t1 | gi|697431718|ref|XP_009670423.1| | PREDICTED: alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B [Struthio camelus australis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 7.3 |
| Venom grand-1 | 2.7 |
| Pit, infrared sensing | 10.0 |
| Nose | 15.0 |
| Brain-1 | 12.0 |
| Eye | 4.7 |
| fetal fibroblast | 3.7 |
| venom gland-2 | 2.8 |
| Brain-2 | 10.4 |
| Spleen | 10.4 |
| Lung | 22.3 |
| Liver | 90.6 |
| Kidney | 37.6 |
| Pancreas | 14.0 |
| Small intestine | 34.0 |
| Large intestine | 5.3 |
| Stomach | 11.9 |
| heart | 9.7 |
| ovary | 10.5 |
| cheek muscle | 9.1 |
Transcript
| Transcript ID | habu1_s4907_g14938.t1 |
|---|---|
| Definition | - |
>habu1_s4907_g14938.t1 accataaagccggcataaataaacataaagaacaaagaggctcaaccattaggagaacagccaaaaactgagaacaggaa agatgttcaagtccttggatctcagtctgattgtggaattcatacttatgttctacaaagataaacccatcgattggctt cttgatcacatcctctgggtaaaagtttgcaacccagagaaagatgcgaaacattgtgatagacaaaaggcaaacttaag aatccgcttcaagccttcgctcttccaacatgtaggaactcattcctctttggctggtaaaatacaaaaattgaaagaca aagattttggaaagcagtctcttcgcaaagagcacgtgaaccctcctgcagaagtgagcacgagcctgaagacctaccag cacttctccttggagaaagcctacctgagagaagactttttctgggcgtttactcccacagcgggtgactttatacgctt tcgcttctttaagccgctccgtattgaacggtttttctttcgtagtggcaacattgaacaccctgaagacaaactattca acacaacagtggaagtcttgccatttgatagtctgcagtcagataaggaggccctgcaggagggaagagcaacagcattc aagtaccacaggacgtctgatggctacatacagataggctcattttcaaagggcattgctgaaggagaagtggacccttc ctttggccctctggaagcaatgcgactcaccatccagacagactctcctgtgtggataatcttgagtgagatattcctga aaaaagctgactgatactgaagttactgaagggagtaatatatccaatggctttctagctcttc |
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Protein
| Protein ID | habu1_s4907_g14938.t1 |
|---|---|
| Definition | - |
>habu1_s4907_g14938.t1 MFKSLDLSLIVEFILMFYKDKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFKPSLFQHVGTHSSLAGKIQKLKDK DFGKQSLRKEHVNPPAEVSTSLKTYQHFSLEKAYLREDFFWAFTPTAGDFIRFRFFKPLRIERFFFRSGNIEHPEDKLFN TTVEVLPFDSLQSDKEALQEGRATAFKYHRTSDGYIQIGSFSKGIAEGEVDPSFGPLEAMRLTIQTDSPVWIILSEIFLK KAD |
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