Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s4907_g14941
Locus habu1_scaffold4907 : 311028 ... 336075 : -
To GenomeBrowser habu1_scaffold4907:311028..336075
Genes list of scaffold habu1_scaffold4907

Annotation by Blast2GO
Annotation GO
calnexin isoform x2 GO:0005509 GO:0006457 GO:0016021 GO:0044233 GO:0044822 GO:0048488 GO:0051082 GO:0070062 GO:0072583

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s4907_g14941.t2 1 1 Calreticulin 74 445 0.0 539.2 0.0 0.0 539.2

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 73.2
Venom grand-1 76.9
Pit, infrared sensing 64.1
Nose 71.6
Brain-1 65.7
Eye 50.0
fetal fibroblast 272.3
venom gland-2 301.6
Brain-2 76.3
Spleen 49.7
Lung 49.3
Liver 34.4
Kidney 90.1
Pancreas 40.5
Small intestine 46.5
Large intestine 43.6
Stomach 52.3
heart 105.1
ovary 58.2
cheek muscle 164.0

Transcript
Transcript IDhabu1_s4907_g14941.t1
Definition-
>habu1_s4907_g14941.t1
attaaaggcacttggggccgcctggagttctttccccggtgggagcgcggataagaccatgaagcgaaagtgcttgctat
ttgcattattgctagtagttggaacatccagtctcctggcacatgacagtgatgatcatgatcatgatgatgaagatgta
atagatatagaagatgacttggataatggtgctgaagaagtagaagaattaaagcatgaaaccagtgctcctccattacc
taaggttacctatacagctccagtaccaacaggagaagtttattttgccgaaaactttgataaaggaactttagaagggt
gggtcctttctaaagccaagaaggacgatacggatgatgagattgccaaatatgatggcaaatgggaagtacaggaaatg
aaggatactaaacttcctggggataaaggacttgtgttggtttcacgggccaaacatcatgcaatttctgccaaacttaa
taagccttttatctttgacaccaggcctctcattgtacagtatgaagtcaacttccaaaatggaattgagtgtggtggtg
catatgtgaaactgcttactaaatctaatgatttaaatttggaccagttccacgacaagactccatacacaattatgttt
ggtcctgacaagtgtggtgaggattacaagttacatttcattttccgccacaagaatccaaagactggcaaatatgagga
gaaacatgccaagcgtccggaggcagagttaaagaatttttttactgataagaagacgcatctttatacactggtcttga
atccagacaacagctttgaaatgttgattgatcaaactgttgtaaacagtgggaatctactatctgatatgacccctcct
ataaatcctccacgtgagatagaagacccaaatgatcagaagccagaagattgggatgagagagctaagattccagatcc
agatgctgttaaaccagatgattgggatgaggatgctcctgctaaaattccagatgaagatgctatgaagccagaaggtt
ggttggatgatgagccagaatatgtggctgatcctgatgcagaaaaaccagaggattgggatgaagatatggatggagag
tgggaggcaccccagattgcaaaccccaaatgtgaatcggctcctggctgtggtacctggcaacgacccacaattgacaa
tccaaactataaaggcaaatggaagcccactatgattgacaaccccaactatcagggcatctggaagccaaggaagattc
aaaacccagacttctttgaagacttacagccattcaaaatgactccctttaatgctgtgggacttgaattatggtctatg
acttcagatatattatttgataatttcatcatctgtgctgaccgagcagtagcagatgattggggtaatgatggatgggg
cctaaagaaggccgctgatggtgcagctgagcctggtgttgtgacccaaatgatggctgccgctgaagaacgtccctggc
tttggatagtatatatcttgacagtggctctgcctgtttttctcgttgttattttctgctgctctggaaagacaaaacaa
ccaagtgctgcagagtacaaaaagacagatgctcctcaaccagatgtaaatgaagaagagaaggtggaggagaaagaaaa
agaagaggaggaggaggaagaggaggaggaggaagaggaagaatcagttgaaaaaaagcctgaagaaaagcccaggaatg
atggaaatacagaaaatgtgagccaagaggaggaggaggaagaggcagaagaggaggcagaagaggaagaagaagaggcg
gaaatggaagaagaggaagaaagcagagacattacaggggaggaagaaactgtgaataggtctcccagaaatagaaaacc
aagaagagattgaaatatcctaaaaacttaatctgatgaatttttctgatatggttttgggagaggaccatggataacat
tttgctgaaaatcgaaaatcctcaaaattcaccatccataggttcctgtcaaatactctgcagtgaaaagtgtttagcag
tcaaatatttgcaattgtgtttctaaataatattcctgtagaaaaagaatgcatttaacacaacccggctatgaatttct
ggaatgttacaaaaactaacatttttattttgtttttaaatagatggtagaattaccagtctcaaaacttttggcttaaa
ttaatgtattaatctatcaatggaagtgaagagcaaaccttaagaaaaatgccagatgtaaagtttttataagtcttttc
tttcttaaaaagatagaaattcttatacaactcttatttctcatagtatgatcatgttaaatgtaggataaagttaaaat
ccatttgaagcagtcttcaaatgctcaaactttccttattgatgaaaagcaagtggccatgaaatactcatattggtcac
ggatacagctcagttaaaacagtgtttgcactagtctgaatttaggagcagattttagtgagactggattgtcttgttcg
tttatattttgaactttttctcaatttggaatttgctttcagtttttgtgtttccccccctcccccagttttttttaaac
atttccttctgttccaactgttgcttctcctgtacagttttttcagacgcagcttagctgctggagaatacacttgttta
gctcactgttaaaattgtgtttcttgttctcagaaggtagcactacttacttctgggtccaaacattgtgaaacaggaca
gtgttgctaaccttcttgttgttgccatcttatgttcattattcacaggataaaaggcacaggcaagctgatctttcaag
ttttatttgtgctgaaagcaaatgtcagtatttgtagctgaggaataagcatgtgaaaacttggcatatgtaacattttg
agtctcagtgctcttcatgtatcaaaaatgttgtgaatctagggggttccagatgaataaattttttaaaaatatattgc
att
Transcript IDhabu1_s4907_g14941.t2
Definition-
>habu1_s4907_g14941.t2
attaaaggcacttggggccgcctggagttctttccccggtgggagcgcggataagcttctcttgctcctttttcttttgt
agaagataaggttactattctgattatactgactttcattgaagtatttccattggtatctgctcctccagattagagac
catgaagcgaaagtgcttgctatttgcattattgctagtagttggaacatccagtctcctggcacatgacagtgatgatc
atgatcatgatgatgaagatgtaatagatatagaagatgacttggataatggtgctgaagaagtagaagaattaaagcat
gaaaccagtgctcctccattacctaaggttacctatacagctccagtaccaacaggagaagtttattttgccgaaaactt
tgataaaggaactttagaagggtgggtcctttctaaagccaagaaggacgatacggatgatgagattgccaaatatgatg
gcaaatgggaagtacaggaaatgaaggatactaaacttcctggggataaaggacttgtgttggtttcacgggccaaacat
catgcaatttctgccaaacttaataagccttttatctttgacaccaggcctctcattgtacagtatgaagtcaacttcca
aaatggaattgagtgtggtggtgcatatgtgaaactgcttactaaatctaatgatttaaatttggaccagttccacgaca
agactccatacacaattatgtttggtcctgacaagtgtggtgaggattacaagttacatttcattttccgccacaagaat
ccaaagactggcaaatatgaggagaaacatgccaagcgtccggaggcagagttaaagaatttttttactgataagaagac
gcatctttatacactggtcttgaatccagacaacagctttgaaatgttgattgatcaaactgttgtaaacagtgggaatc
tactatctgatatgacccctcctataaatcctccacgtgagatagaagacccaaatgatcagaagccagaagattgggat
gagagagctaagattccagatccagatgctgttaaaccagatgattgggatgaggatgctcctgctaaaattccagatga
agatgctatgaagccagaaggttggttggatgatgagccagaatatgtggctgatcctgatgcagaaaaaccagaggatt
gggatgaagatatggatggagagtgggaggcaccccagattgcaaaccccaaatgtgaatcggctcctggctgtggtacc
tggcaacgacccacaattgacaatccaaactataaaggcaaatggaagcccactatgattgacaaccccaactatcaggg
catctggaagccaaggaagattcaaaacccagacttctttgaagacttacagccattcaaaatgactccctttaatgctg
tgggacttgaattatggtctatgacttcagatatattatttgataatttcatcatctgtgctgaccgagcagtagcagat
gattggggtaatgatggatggggcctaaagaaggccgctgatggtgcagctgagcctggtgttgtgacccaaatgatggc
tgccgctgaagaacgtccctggctttggatagtatatatcttgacagtggctctgcctgtttttctcgttgttattttct
gctgctctggaaagacaaaacaaccaagtgctgcagagtacaaaaagacagatgctcctcaaccagatgtaaatgaagaa
gagaaggtggaggagaaagaaaaagaagaggaggaggaggaagaggaggaggaggaagaggaagaatcagttgaaaaaaa
gcctgaagaaaagcccaggaatgatggaaatacagaaaatgtgagccaagaggaggaggaggaagaggcagaagaggagg
cagaagaggaagaagaagaggcggaaatggaagaagaggaagaaagcagagacattacaggggaggaagaaactgtgaat
aggtctcccagaaatagaaaaccaagaagagattgaaatatcctaaaaacttaatctgatgaatttttctgatatggttt
tgggagaggaccatggataacattttgctgaaaatcgaaaatcctcaaaattcaccatccataggttcctgtcaaatact
ctgcagtgaaaagtgtttagcagtcaaatatttgcaattgtgtttctaaataatattcctgtagaaaaagaatgcattta
acacaacccggctatgaatttctggaatgttacaaaaactaacatttttattttgtttttaaatagatggtagaattacc
agtctcaaaacttttggcttaaattaatgtattaatctatcaatggaagtgaagagcaaaccttaagaaaaatgccagat
gtaaagtttttataagtcttttctttcttaaaaagatagaaattcttatacaactcttatttctcatagtatgatcatgt
taaatgtaggataaagttaaaatccatttgaagcagtcttcaaatgctcaaactttccttattgatgaaaagcaagtggc
catgaaatactcatattggtcacggatacagctcagttaaaacagtgtttgcactagtctgaatttaggagcagatttta
gtgagactggattgtcttgttcgtttatattttgaactttttctcaatttggaatttgctttcagtttttgtgtttcccc
ccctcccccagttttttttaaacatttccttctgttccaactgttgcttctcctgtacagttttttcagacgcagcttag
ctgctggagaatacacttgtttagctcactgttaaaattgtgtttcttgttctcagaaggtagcactacttacttctggg
tccaaacattgtgaaacaggacagtgttgctaaccttcttgttgttgccatcttatgttcattattcacaggataaaagg
cacaggcaagctgatctttcaagttttatttgtgctgaaagcaaatgtcagtatttgtagctgaggaataagcatgtgaa
aacttggcatatgtaacattttgagtctcagtgctcttcatgtatcaaaaatgttgtgaatctagggggttccagatgaa
taaattttttaaaaatatattgcatt

Protein
Protein IDhabu1_s4907_g14941.t1
Definition-
>habu1_s4907_g14941.t1
MKRKCLLFALLLVVGTSSLLAHDSDDHDHDDEDVIDIEDDLDNGAEEVEELKHETSAPPLPKVTYTAPVPTGEVYFAENF
DKGTLEGWVLSKAKKDDTDDEIAKYDGKWEVQEMKDTKLPGDKGLVLVSRAKHHAISAKLNKPFIFDTRPLIVQYEVNFQ
NGIECGGAYVKLLTKSNDLNLDQFHDKTPYTIMFGPDKCGEDYKLHFIFRHKNPKTGKYEEKHAKRPEAELKNFFTDKKT
HLYTLVLNPDNSFEMLIDQTVVNSGNLLSDMTPPINPPREIEDPNDQKPEDWDERAKIPDPDAVKPDDWDEDAPAKIPDE
DAMKPEGWLDDEPEYVADPDAEKPEDWDEDMDGEWEAPQIANPKCESAPGCGTWQRPTIDNPNYKGKWKPTMIDNPNYQG
IWKPRKIQNPDFFEDLQPFKMTPFNAVGLELWSMTSDILFDNFIICADRAVADDWGNDGWGLKKAADGAAEPGVVTQMMA
AAEERPWLWIVYILTVALPVFLVVIFCCSGKTKQPSAAEYKKTDAPQPDVNEEEKVEEKEKEEEEEEEEEEEEEESVEKK
PEEKPRNDGNTENVSQEEEEEEAEEEAEEEEEEAEMEEEEESRDITGEEETVNRSPRNRKPRRD
Protein IDhabu1_s4907_g14941.t2
Definition-
>habu1_s4907_g14941.t2
MKRKCLLFALLLVVGTSSLLAHDSDDHDHDDEDVIDIEDDLDNGAEEVEELKHETSAPPLPKVTYTAPVPTGEVYFAENF
DKGTLEGWVLSKAKKDDTDDEIAKYDGKWEVQEMKDTKLPGDKGLVLVSRAKHHAISAKLNKPFIFDTRPLIVQYEVNFQ
NGIECGGAYVKLLTKSNDLNLDQFHDKTPYTIMFGPDKCGEDYKLHFIFRHKNPKTGKYEEKHAKRPEAELKNFFTDKKT
HLYTLVLNPDNSFEMLIDQTVVNSGNLLSDMTPPINPPREIEDPNDQKPEDWDERAKIPDPDAVKPDDWDEDAPAKIPDE
DAMKPEGWLDDEPEYVADPDAEKPEDWDEDMDGEWEAPQIANPKCESAPGCGTWQRPTIDNPNYKGKWKPTMIDNPNYQG
IWKPRKIQNPDFFEDLQPFKMTPFNAVGLELWSMTSDILFDNFIICADRAVADDWGNDGWGLKKAADGAAEPGVVTQMMA
AAEERPWLWIVYILTVALPVFLVVIFCCSGKTKQPSAAEYKKTDAPQPDVNEEEKVEEKEKEEEEEEEEEEEEEESVEKK
PEEKPRNDGNTENVSQEEEEEEAEEEAEEEEEEAEMEEEEESRDITGEEETVNRSPRNRKPRRD

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Okinawa Institute of Science and Technology
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