Gene
| Gene Model ID | habu1_s4907_g14944 |
|---|---|
| Locus | habu1_scaffold4907 : 381594 ... 403180 : - |
| To GenomeBrowser | habu1_scaffold4907:381594..403180 |
| Genes list of scaffold | habu1_scaffold4907 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| run and fyve domain-containing protein 1 | GO:0008270 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s4907_g14944.t2 | 1 | 1 | RUN | 136 | 257 | 2.2e-28 | 98.6 | 1.3e-31 | 2.2e-28 | 98.6 |
| habu1_s4907_g14944.t2 | 1 | 1 | FYVE | 626 | 687 | 2.8e-20 | 71.9 | 4.7e-23 | 7.7e-20 | 70.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s4907_g14944.t2 | gi|530608497|ref|XP_005295911.1| | PREDICTED: RUN and FYVE domain-containing protein 1 isoform X1 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 9.9 |
| Venom grand-1 | 18.1 |
| Pit, infrared sensing | 10.6 |
| Nose | 12.6 |
| Brain-1 | 6.0 |
| Eye | 10.6 |
| fetal fibroblast | 17.7 |
| venom gland-2 | 18.4 |
| Brain-2 | 7.4 |
| Spleen | 13.2 |
| Lung | 13.4 |
| Liver | 8.7 |
| Kidney | 10.6 |
| Pancreas | 20.1 |
| Small intestine | 11.3 |
| Large intestine | 14.5 |
| Stomach | 14.2 |
| heart | 26.7 |
| ovary | 28.2 |
| cheek muscle | 28.3 |
Transcript
| Transcript ID | habu1_s4907_g14944.t1 |
|---|---|
| Definition | - |
>habu1_s4907_g14944.t1 ggggagagaaagcctagaaaactgcaacctccagcagcaggagcaactaaaatggcgtctccgctttcttgtttataatg gctcggagtttgctgggccaatttgcctctgtgtccaatgagaagcgagtttggggtgagaatttgaacatttttctccc ctgtcaaaacttaaggcggcaaatgagagagagtgaccaatccgggcccttggaatggttgatgcaaagttgtaattggc tcgcagaaagcgtataagagattcggtgtgttttgtccaatgagaggcctctctttgaacgtgcaggaggtgggaagtgt tgctcgggtaacgcaggtgcagcagccagatcccacacaatggaagaacgttccaatcttgtgaatatgatgaaattgag cattaaaatcttaatccagtcagctttgagtttggggagaactcttgattctgacttccctcctctgcagcagttcttta ttgttttggaacattgtctcaagcatggacttaaagctaagaagagctttattgggcagaacaaatcattttttgggcct ttagaattagtggagagactttgtccagaggcatcagatttagcaacaagtgtcagaaatctgccagaattaaggactcc aatcggaagaggcagagcttggctttatcttgccgtgatgcaaaagaaactggcagactacttgaaagtactcttggatc acaagtgtctcttgagtgaatattatgagcctgatgcgttgatgatggaagaagaaggagctttgattgtgggcctgttg gtggggctaaatgtcattgatgcaaatctctgtttaaaaggagaagacttggattcccaggttgcagtgattgatttttc tctgtaccttaaggatgcacagtgcactgacaacggcaaaggagatgaagaaattactgctgtgcttgaccagaaacatt atgtagaagaacttaatcgacatttaagttgcaccgttggagatcttcagagcaagatagagtgcttagagaaaacaaat tccaagctccaagaagagctatcagcagcaacagatcgaatcaaagctctccaggaagaagaacaggagctgaaacagga aaacgaattaattcgtgaacgtagtgaaaagtatgctgaggtaactaaactggacaccaaagtggaactggaaacctata agcaatcacgacaaggcctagatgaaatgtatagtgatgtctggaagcaattaaaagaggagaaaagaattcgaatggag ttggaaaaagaattggaccttcagactgcaatgaaaacagagatggaaattgccatgaaacttctagagaaagatacaca tgaaaaacaagataccttggttgcacttcgccagcagttggaggaagttaaggctatcaacttgcagatgttcaataaat ctcagactgcagagagttctttacaacagaaaaaagaagcaatatcatcctttgaaggcaaaacagatcaaatgatgtct tctgtgaaacaattggaggacagactgcagcgtgcagacaaggccaagcagcttgcagaagagaaaaatgtcaaactgaa acaagaactggggggcaaaattgagactctgaagcagcaactaatccaactggatagcaactgttcagttattgaaagag agttaaaatctgagaaagaacagcgacagagactgcagcgagagttacaccaagagaaagacactacagctttgctgaaa gctgaactgcagcaagtagaaggtttgaaaaaagaattgcgaaaactgcaggaagagaagcagcagctagaaaagatctg tgcagaacaagaacaagcccttcaagaaatggggcttcatcttagccaatcaaaacttaagatggaggatattaaagaag taaataaagcattaaagggccatgcatggctaaaagatgatgaagcaaccaactgtaagcagtgtgagaaagaattctcc atttcaagaagaaagcaccactgtcgaaactgcggtcacatcttttgtcatacttgttcaagcaatgaacttgcacttcc atcatatccaaaacctgtacgagtttgtgatacttgccatacgttgctgcttcagaggtgtacatcaatttcttcctaaa atctatgctccagaatgctaattccagggaatgaacctaacatgtaataagttttttaatattctaaattccattaacat atacggcactgtgtattatattcaaacaggaaaagatttaatttataaaaatgggataccaaaatcatggaaactatttt ttatagatcaagtgccagcaaaatgtcatattcaaaaatacactatttcaagagcacacctgttatttttaagttcaaaa atcctattgtttgaatgttaactttatacttcaggtttatagatttgctctaaaacaaattaattttctgaacacttcat ggatctatctatcttctgttaacagttcacttaaatttctgttgatctaataaaaaatgaaaatgttctatggaagcatt tttaaagaatgtatgcttggatgtgccttctaaatctttcaaaagtgaacagaataacatactgtaaattatctgtgatt acgcaataaagttgatccacacttgttacata |
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| Transcript ID | habu1_s4907_g14944.t2 |
| Definition | - |
>habu1_s4907_g14944.t2 aagaagttctggggctcttgatggtgacgggtgtcatatgacccaaggaaagatggccgaagacgggcagagcggcgagg aacttgcggctgaatcgagagaagattttgaagtcgttgatggcgcccagatccccagcgcctctgagctgaaaagcgat ggcaaagagaggggggcggcagatgccagctggtccgctcccatcttctccctggccaagaaagcctcggaaaacttatc cgtgagctacggaaacgctctgaagtctgcagcctcggtaggactcattcccaaaccactcagcaatgacagcccagcaa aacaaacagccagatcccacacaatggaagaacgttccaatcttgtgaatatgatgaaattgagcattaaaatcttaatc cagtcagctttgagtttggggagaactcttgattctgacttccctcctctgcagcagttctttattgttttggaacattg tctcaagcatggacttaaagctaagaagagctttattgggcagaacaaatcattttttgggcctttagaattagtggaga gactttgtccagaggcatcagatttagcaacaagtgtcagaaatctgccagaattaaggactccaatcggaagaggcaga gcttggctttatcttgccgtgatgcaaaagaaactggcagactacttgaaagtactcttggatcacaagtgtctcttgag tgaatattatgagcctgatgcgttgatgatggaagaagaaggagctttgattgtgggcctgttggtggggctaaatgtca ttgatgcaaatctctgtttaaaaggagaagacttggattcccaggttgcagtgattgatttttctctgtaccttaaggat gcacagtgcactgacaacggcaaaggagatgaagaaattactgctgtgcttgaccagaaacattatgtagaagaacttaa tcgacatttaagttgcaccgttggagatcttcagagcaagatagagtgcttagagaaaacaaattccaagctccaagaag agctatcagcagcaacagatcgaatcaaagctctccaggaagaagaacaggagctgaaacaggaaaacgaattaattcgt gaacgtagtgaaaagtatgctgaggtaactaaactggacaccaaagtggaactggaaacctataagcaatcacgacaagg cctagatgaaatgtatagtgatgtctggaagcaattaaaagaggagaaaagaattcgaatggagttggaaaaagaattgg accttcagactgcaatgaaaacagagatggaaattgccatgaaacttctagagaaagatacacatgaaaaacaagatacc ttggttgcacttcgccagcagttggaggaagttaaggctatcaacttgcagatgttcaataaatctcagactgcagagag ttctttacaacagaaaaaagaagcaatatcatcctttgaaggcaaaacagatcaaatgatgtcttctgtgaaacaattgg aggacagactgcagcgtgcagacaaggccaagcagcttgcagaagagaaaaatgtcaaactgaaacaagaactggggggc aaaattgagactctgaagcagcaactaatccaactggatagcaactgttcagttattgaaagagagttaaaatctgagaa agaacagcgacagagactgcagcgagagttacaccaagagaaagacactacagctttgctgaaagctgaactgcagcaag tagaaggtttgaaaaaagaattgcgaaaactgcaggaagagaagcagcagctagaaaagatctgtgcagaacaagaacaa gcccttcaagaaatggggcttcatcttagccaatcaaaacttaagatggaggatattaaagaagtaaataaagcattaaa gggccatgcatggctaaaagatgatgaagcaaccaactgtaagcagtgtgagaaagaattctccatttcaagaagaaagc accactgtcgaaactgcggtcacatcttttgtcatacttgttcaagcaatgaacttgcacttccatcatatccaaaacct gtacgagtttgtgatacttgccatacgttgctgcttcagaggtgtacatcaatttcttcctaaaatctatgctccagaat gctaattccagggaatgaacctaacatgtaataagttttttaatattctaaattccattaacatatacggcactgtgtat tatattcaaacaggaaaagatttaatttataaaaatgggataccaaaatcatggaaactattttttatagatcaagtgcc agcaaaatgtcatattcaaaaatacactatttcaagagcacacctgttatttttaagttcaaaaatcctattgtttgaat gttaactttatacttcaggtttatagatttgctctaaaacaaattaattttctgaacacttcatggatctatctatcttc tgttaacagttcacttaaatttctgttgatctaataaaaaatgaaaatgttctatggaagcatttttaaagaatgtatgc ttggatgtgccttctaaatctttcaaaagtgaacagaataacatactgtaaattatctgtgattacgcaataaagttgat ccacacttgttacata |
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Protein
| Protein ID | habu1_s4907_g14944.t1 |
|---|---|
| Definition | - |
>habu1_s4907_g14944.t1 MEERSNLVNMMKLSIKILIQSALSLGRTLDSDFPPLQQFFIVLEHCLKHGLKAKKSFIGQNKSFFGPLELVERLCPEASD LATSVRNLPELRTPIGRGRAWLYLAVMQKKLADYLKVLLDHKCLLSEYYEPDALMMEEEGALIVGLLVGLNVIDANLCLK GEDLDSQVAVIDFSLYLKDAQCTDNGKGDEEITAVLDQKHYVEELNRHLSCTVGDLQSKIECLEKTNSKLQEELSAATDR IKALQEEEQELKQENELIRERSEKYAEVTKLDTKVELETYKQSRQGLDEMYSDVWKQLKEEKRIRMELEKELDLQTAMKT EMEIAMKLLEKDTHEKQDTLVALRQQLEEVKAINLQMFNKSQTAESSLQQKKEAISSFEGKTDQMMSSVKQLEDRLQRAD KAKQLAEEKNVKLKQELGGKIETLKQQLIQLDSNCSVIERELKSEKEQRQRLQRELHQEKDTTALLKAELQQVEGLKKEL RKLQEEKQQLEKICAEQEQALQEMGLHLSQSKLKMEDIKEVNKALKGHAWLKDDEATNCKQCEKEFSISRRKHHCRNCGH IFCHTCSSNELALPSYPKPVRVCDTCHTLLLQRCTSISS |
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| Protein ID | habu1_s4907_g14944.t2 |
| Definition | - |
>habu1_s4907_g14944.t2 MAEDGQSGEELAAESREDFEVVDGAQIPSASELKSDGKERGAADASWSAPIFSLAKKASENLSVSYGNALKSAASVGLIP KPLSNDSPAKQTARSHTMEERSNLVNMMKLSIKILIQSALSLGRTLDSDFPPLQQFFIVLEHCLKHGLKAKKSFIGQNKS FFGPLELVERLCPEASDLATSVRNLPELRTPIGRGRAWLYLAVMQKKLADYLKVLLDHKCLLSEYYEPDALMMEEEGALI VGLLVGLNVIDANLCLKGEDLDSQVAVIDFSLYLKDAQCTDNGKGDEEITAVLDQKHYVEELNRHLSCTVGDLQSKIECL EKTNSKLQEELSAATDRIKALQEEEQELKQENELIRERSEKYAEVTKLDTKVELETYKQSRQGLDEMYSDVWKQLKEEKR IRMELEKELDLQTAMKTEMEIAMKLLEKDTHEKQDTLVALRQQLEEVKAINLQMFNKSQTAESSLQQKKEAISSFEGKTD QMMSSVKQLEDRLQRADKAKQLAEEKNVKLKQELGGKIETLKQQLIQLDSNCSVIERELKSEKEQRQRLQRELHQEKDTT ALLKAELQQVEGLKKELRKLQEEKQQLEKICAEQEQALQEMGLHLSQSKLKMEDIKEVNKALKGHAWLKDDEATNCKQCE KEFSISRRKHHCRNCGHIFCHTCSSNELALPSYPKPVRVCDTCHTLLLQRCTSISS |
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