Gene
| Gene Model ID | habu1_s4917_g14980 |
|---|---|
| Locus | habu1_scaffold4917 : 24 ... 86917 : + |
| To GenomeBrowser | habu1_scaffold4917:24..86917 |
| Genes list of scaffold | habu1_scaffold4917 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| copine- partial | GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s4917_g14980.t2 | 2 | 1 | C2 | 10 | 67 | 7.6e-22 | 76.9 | 2.1e-09 | 7.8e-06 | 25.6 |
| habu1_s4917_g14980.t2 | 2 | 2 | C2 | 115 | 199 | 7.6e-22 | 76.9 | 1.0e-16 | 3.7e-13 | 49.1 |
| habu1_s4917_g14980.t2 | 1 | 1 | Copine | 285 | 432 | 0.0 | 215.9 | 0.0 | 0.0 | 215.1 |
| habu1_s4917_g14980.t2 | 1 | 1 | vWA-TerF-like | 348 | 444 | 2.5e-09 | 37.2 | 1.3e-12 | 4.9e-09 | 36.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s4917_g14980.t2 | gi|529445185|ref|XP_005242303.1| | PREDICTED: copine-4 [Falco peregrinus] | 0.0 |
| habu1_s4917_g14980.t2 | gi|543729132|ref|XP_005505639.1| | PREDICTED: copine-4 [Columba livia] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.2 |
| Nose | 0.1 |
| Brain-1 | 25.4 |
| Eye | 1.0 |
| fetal fibroblast | 0.2 |
| venom gland-2 | 0.0 |
| Brain-2 | 8.9 |
| Spleen | 0.0 |
| Lung | 0.0 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.0 |
| Large intestine | 0.0 |
| Stomach | 0.1 |
| heart | 0.3 |
| ovary | 0.1 |
| cheek muscle | 0.1 |
Transcript
| Transcript ID | habu1_s4917_g14980.t1 |
|---|---|
| Definition | - |
>habu1_s4917_g14980.t1 atgggtggatcctccatctccgtgctgagaaaaggcgttcaggttgatcggacagaagtcataagaacttgcataaaccc tgtcttctcaaagctattcacagtggatttttattttgaagaagttcagaggctacgatttgaagtccatgatatcagca gcaatcacaatgggctgaaagaagcagatttccttggtggcatggagtgtactctggggcagattgtttctcagagaaaa ctttcaaaatctttattgaaacatggcaacacagcaggcaaatcttccataacggtaatcgctgaagaattatctggcaa tgatgactatgttgagctttcctttagtgcaagaaaattagatgacaaggatttcttcagcaaatctgatccctttctgg aaatcttccgaatgaacgatgatgcaacccaacagcttgttcacaggaccgaggtggtgatgaataacttaaacccagct tggaaggcatttaaggtgtctgtaaattctctttgcagcggtgaccaagatcgcagactgaagtgcatagtctgggactg ggattccaatggcaagcatgacttcattggagaattcagttcaactttcaaggaaatgcgaggagcaatggaaggaagac aggttcagtgggagtgtataaaccccaagtataaagtaaagaagaagaattacaagaactctggcatcgtcattctcaat ctgtgcaagattcacaagatgcattcattcttagattacataatgggtggctgccaaatacagtttacagtagctataga ttttacagcctcaaatggtgatcctcggaacagctgttctctccactacatccatccatatcaaccaaatgaatacttga aggcactagttgctgttggggaaatctgccaagactatgacagtgataaaatgttcccagtgtatgggtttggagccagg atacctccggactataaagtatctcatgattttgcaatcaactttaatgaagataatccagaatgtgcagggattcaagg ggttgtggaagcatatcagaattgtctcccaaagcttcagctttatggaccaaccaacattgctcccatcatccaaaagg tggctaaatcagcatcagaagaaacaaacaccaaggaggcatcgcaatatttcatcttgttgattctgacggatggggtc atcacagacatggctgacacacgtgaagccattgtccatgcctctcacctccccatgtcggtcatcattgttggagtcgg aaatgctgatttcagtgacatgcagatgcttgatggggacgatggcatcctgcggtctcccaagggagaaccagttctac gagacattgttcagtttgtgccattcagaaacttcaaacatgcatccccagctgcattagcaaaaagtgttttggctgaa gttccaaatcaagtggttgactattataatgggaaagcaattaaaccaaaatgtatgtcagaatatgagtcttccaggac actagctccatgaacttccctacatacttgacagagtccagaaataatactatttataactattgtatttaaaacaaaaa tagcacgtttttgtgatttttaaataaatcctcccttttatttttgcatgtgtagcctaaaggcttataagtaaagatta agccattgtattgttaaagactttttatgaaaaaacaaacaacattattactctttacattacagcatgttatcttgaaa tgaaaagttatctgtatctgttttttatactggtttgttgaaattttgctaaatttcttattatctttacactgtaaagc attttgaaacatttatcggaagttgatagccagaatatctttgggtttatctgctatgaaatgaaaagtttttttcaaaa tggcagatgcatggattgtatttgcatgttccaaaataaaaacaacacagttttgcagttgtgtttcttgctacaaagct gtttgttcaaatgttttcataaagaattccattttcagattatgacaattcctattatcaaaacctcttcaaactttttc aggaaattatacttcagacatgaatctaagatatgtataataagcatgacaattacttacataagaaatgtggccataca taaccaagagtaggagataatgtaaaataaaacaaggactaatgcacaataatagacaacagttattgcaatattattta atggtagtgtttacatatgttaaaccatgatttacttggataaaccacagtgaatgattaagctttgaacactagtctat aaaacatactggctaatttcacagaaaccactaaatcaagcaaccaagcaaatgtgcagcttttagccagtagatcttat tttatagcatagatctaactctttcttgaatgcctttgacacagccaggcattaaaagaattacttcttaatagactttt ataaaaacctgcaattcctcttttctaaaattatgagggtactatattgcagaaaagctacaaataagacaaactcagta atagaaagttgaatgttacaagcaattcaactggattatttgataaatggaaaataatgatgagaactctctgtatctcg caattgcaatcaggagatcctcaagacaacttgaaaaaattagaaataacagatttctatatctgaggtctggaatggat tatattttaaatgtattctaagctgccttgagaatatcagttagaaaccaggataactgtcctcttgtagggaaaaataa atcagttgcataaattgttacaa |
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| Transcript ID | habu1_s4917_g14980.t2 |
| Definition | - |
>habu1_s4917_g14980.t2 atgggtggatcctccatctccgtgctgagaaaaggcgttcaggttgatcggacagaagtcataagaacttgcataaaccc tgtcttctcaaagctattcacagtggatttttattttgaagaagttcagaggctacgatttgaagtccatgatatcagca gcaatcacaatgggctgaaagaagcagatttccttggtggcatggagtgtactctggggcagattgtttctcagagaaaa ctttcaaaatctttattgaaacatggcaacacagcaggcaaatcttccataacggtaatcgctgaagaattatctggcaa tgatgactatgttgagctttcctttagtgcaagaaaattagatgacaaggatttcttcagcaaatctgatccctttctgg aaatcttccgaatgaacgatgatgcaacccaacagcttgttcacaggaccgaggtggtgatgaataacttaaacccagct tggaaggcatttaaggtgtctgtaaattctctttgcagcggtgaccaagatcgcagactgaagtgcatagtctgggactg ggattccaatggcaagcatgacttcattggagaattcagttcaactttcaaggaaatgcgaggagcaatggaaggaagac aggttcagtgggagtgtataaaccccaagtataaagtaaagaagaagaattacaagaactctggcatcgtcattctcaat ctgtgcaagattcacaagatgcattcattcttagattacataatgggtggctgccaaatacagtttacagacttctacct gtctgtagctatagattttacagcctcaaatggtgatcctcggaacagctgttctctccactacatccatccatatcaac caaatgaatacttgaaggcactagttgctgttggggaaatctgccaagactatgacagtgataaaatgttcccagtgtat gggtttggagccaggatacctccggactataaagtatctcatgattttgcaatcaactttaatgaagataatccagaatg tgcagggattcaaggggttgtggaagcatatcagaattgtctcccaaagcttcagctttatggaccaaccaacattgctc ccatcatccaaaaggtggctaaatcagcatcagaagaaacaaacaccaaggaggcatcgcaatatttcatcttgttgatt ctgacggatggggtcatcacagacatggctgacacacgtgaagccattgtccatgcctctcacctccccatgtcggtcat cattgttggagtcggaaatgctgatttcagtgacatgcagatgcttgatggggacgatggcatcctgcggtctcccaagg gagaaccagttctacgagacattgttcagtttgtgccattcagaaacttcaaacatgcatccccagctgcattagcaaaa agtgttttggctgaagttccaaatcaagtggttgactattataatgggaaagcaattaaaccaaaatgtatgtcagaata tgagtcttccaggacactagctccatgaacttccctacatacttgacagagtccagaaataatactatttataactattg tatttaaaacaaaaatagcacgtttttgtgatttttaaataaatcctcccttttatttttgcatgtgtagcctaaaggct tataagtaaagattaagccattgtattgttaaagactttttatgaaaaaacaaacaacattattactctttacattacag catgttatcttgaaatgaaaagttatctgtatctgttttttatactggtttgttgaaattttgctaaatttcttattatc tttacactgtaaagcattttgaaacatttatcggaagttgatagccagaatatctttgggtttatctgctatgaaatgaa aagtttttttcaaaatggcagatgcatggattgtatttgcatgttccaaaataaaaacaacacagttttgcagttgtgtt tcttgctacaaagctgtttgttcaaatgttttcataaagaattccattttcagattatgacaattcctattatcaaaacc tcttcaaactttttcaggaaattatacttcagacatgaatctaagatatgtataataagcatgacaattacttacataag aaatgtggccatacataaccaagagtaggagataatgtaaaataaaacaaggactaatgcacaataatagacaacagtta ttgcaatattatttaatggtagtgtttacatatgttaaaccatgatttacttggataaaccacagtgaatgattaagctt tgaacactagtctataaaacatactggctaatttcacagaaaccactaaatcaagcaaccaagcaaatgtgcagctttta gccagtagatcttattttatagcatagatctaactctttcttgaatgcctttgacacagccaggcattaaaagaattact tcttaatagacttttataaaaacctgcaattcctcttttctaaaattatgagggtactatattgcagaaaagctacaaat aagacaaactcagtaatagaaagttgaatgttacaagcaattcaactggattatttgataaatggaaaataatgatgaga actctctgtatctcgcaattgcaatcaggagatcctcaagacaacttgaaaaaattagaaataacagatttctatatctg aggtctggaatggattatattttaaatgtattctaagctgccttgagaatatcagttagaaaccaggataactgtcctct tgtagggaaaaataaatcagttgcataaattgttacaa |
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Protein
| Protein ID | habu1_s4917_g14980.t1 |
|---|---|
| Definition | - |
>habu1_s4917_g14980.t1 MGGSSISVLRKGVQVDRTEVIRTCINPVFSKLFTVDFYFEEVQRLRFEVHDISSNHNGLKEADFLGGMECTLGQIVSQRK LSKSLLKHGNTAGKSSITVIAEELSGNDDYVELSFSARKLDDKDFFSKSDPFLEIFRMNDDATQQLVHRTEVVMNNLNPA WKAFKVSVNSLCSGDQDRRLKCIVWDWDSNGKHDFIGEFSSTFKEMRGAMEGRQVQWECINPKYKVKKKNYKNSGIVILN LCKIHKMHSFLDYIMGGCQIQFTVAIDFTASNGDPRNSCSLHYIHPYQPNEYLKALVAVGEICQDYDSDKMFPVYGFGAR IPPDYKVSHDFAINFNEDNPECAGIQGVVEAYQNCLPKLQLYGPTNIAPIIQKVAKSASEETNTKEASQYFILLILTDGV ITDMADTREAIVHASHLPMSVIIVGVGNADFSDMQMLDGDDGILRSPKGEPVLRDIVQFVPFRNFKHASPAALAKSVLAE VPNQVVDYYNGKAIKPKCMSEYESSRTLAP |
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| Protein ID | habu1_s4917_g14980.t2 |
| Definition | - |
>habu1_s4917_g14980.t2 MGGSSISVLRKGVQVDRTEVIRTCINPVFSKLFTVDFYFEEVQRLRFEVHDISSNHNGLKEADFLGGMECTLGQIVSQRK LSKSLLKHGNTAGKSSITVIAEELSGNDDYVELSFSARKLDDKDFFSKSDPFLEIFRMNDDATQQLVHRTEVVMNNLNPA WKAFKVSVNSLCSGDQDRRLKCIVWDWDSNGKHDFIGEFSSTFKEMRGAMEGRQVQWECINPKYKVKKKNYKNSGIVILN LCKIHKMHSFLDYIMGGCQIQFTDFYLSVAIDFTASNGDPRNSCSLHYIHPYQPNEYLKALVAVGEICQDYDSDKMFPVY GFGARIPPDYKVSHDFAINFNEDNPECAGIQGVVEAYQNCLPKLQLYGPTNIAPIIQKVAKSASEETNTKEASQYFILLI LTDGVITDMADTREAIVHASHLPMSVIIVGVGNADFSDMQMLDGDDGILRSPKGEPVLRDIVQFVPFRNFKHASPAALAK SVLAEVPNQVVDYYNGKAIKPKCMSEYESSRTLAP |
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