Gene
| Gene Model ID | habu1_s4917_g14981 |
|---|---|
| Locus | habu1_scaffold4917 : 102176 ... 135712 : + |
| To GenomeBrowser | habu1_scaffold4917:102176..135712 |
| Genes list of scaffold | habu1_scaffold4917 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| 39s ribosomal protein mitochondrial | GO:0003735 GO:0005739 GO:0005840 GO:0006412 GO:0042254 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s4917_g14981.t1 | 1 | 1 | Ribosomal_L3 | 109 | 305 | 7.30006e-41 | 140.2 | 7.49695e-43 | 1.1e-38 | 133.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s4917_g14981.t1 | gi|602655730|ref|XP_007433607.1| | PREDICTED: 39S ribosomal protein L3, mitochondrial [Python bivittatus] | 0.0 |
| habu1_s4917_g14981.t1 | gi|530564251|ref|XP_005278706.1| | PREDICTED: 39S ribosomal protein L3, mitochondrial [Chrysemys picta bellii] | 0.0 |
| habu1_s4917_g14981.t1 | gi|637311845|ref|XP_008110976.1| | PREDICTED: 39S ribosomal protein L3, mitochondrial [Anolis carolinensis] | 0.0 |
| habu1_s4917_g14981.t1 | gi|591379698|ref|XP_007064395.1| | PREDICTED: 39S ribosomal protein L3, mitochondrial [Chelonia mydas] | 0.0 |
| habu1_s4917_g14981.t1 | gi|558136857|ref|XP_006117647.1| | PREDICTED: 39S ribosomal protein L3, mitochondrial, partial [Pelodiscus sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 19.0 |
| Venom grand-1 | 9.1 |
| Pit, infrared sensing | 14.6 |
| Nose | 11.7 |
| Brain-1 | 9.2 |
| Eye | 15.1 |
| fetal fibroblast | 33.4 |
| venom gland-2 | 15.8 |
| Brain-2 | 11.8 |
| Spleen | 7.4 |
| Lung | 8.5 |
| Liver | 17.8 |
| Kidney | 14.6 |
| Pancreas | 10.9 |
| Small intestine | 8.8 |
| Large intestine | 13.8 |
| Stomach | 12.1 |
| heart | 29.6 |
| ovary | 26.8 |
| cheek muscle | 24.5 |
Transcript
| Transcript ID | habu1_s4917_g14981.t1 |
|---|---|
| Definition | - |
>habu1_s4917_g14981.t1 gctgtttcgactggttatttggtgtggaatcatgtcgggagttggcctgctgtgtcgtgtagggctgcggcggttggtac ctggaggcatccttaattcagctcccggggcagcggaggctgcggaagttggatttagacggcggggtctgtggttggtc acagttcggcatattatttacaacagcacatggtgggatgagcatctttcagaagaaaatgttgagttccttaagaaact ttcaacagaagaatataaagctcagactgctagtaaactttgtcctctgaaagatgagccttggcctctgcacccatggg agccaggttctaaaagagtcggtcttattgcagtaaagttggggatgatgccattatggaccaagcagggtgaaaaaata cctgtcacaatgcttcaggttcaagactgccatgttttaaaatacacacccaaagaagaatatgatggaaaaactccgag tctaactgttggagggaaaaatgtgtctgagtttcatagaagttcttctgtcatggagatgtacagagaagtaggactcc caccaaaacagaaaatttcagtatttcgagtgtcgtcaaatgctgtcattaagccaggtacacctctatatgcagctcat tttcgccctgggcagtacgtggatatcactgctaaaacaattggcaaaggtttccaaggagtcatgaaaagatggggatt ttctggtcagcctgctacccatggccatactaaatcacacagacgacccggatcaatttctagttctggtgtttcaaagg tcttcaagggaaagaaaatgccaggacgcttaggaaatgtctatcggacagttaagggcctaaagatatggcagatcaat gtgaagcacaatattttatatgtacacggaagtgttcctggtcatagaaattgcttagtaaaggtcagtgacacaatttt agcaaattaccaagatgactttaagaatccaccatttccaacattttttgctgattctgaagaactgcctgatgagttgt atgacgaggagcttttccagttcactgaaccctccatcgcactctctgagtcctgaagaattaatagctattctcccttc agtcttcaaaactaaacaagaagccctcactgaagggccctatgacttccttaagatggtgtccacataatgctggataa ttattgtcaagcaagttttgatttccagatcgattactaaataaaaatagttctttgaaactgaaga |
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Protein
| Protein ID | habu1_s4917_g14981.t1 |
|---|---|
| Definition | - |
>habu1_s4917_g14981.t1 MSGVGLLCRVGLRRLVPGGILNSAPGAAEAAEVGFRRRGLWLVTVRHIIYNSTWWDEHLSEENVEFLKKLSTEEYKAQTA SKLCPLKDEPWPLHPWEPGSKRVGLIAVKLGMMPLWTKQGEKIPVTMLQVQDCHVLKYTPKEEYDGKTPSLTVGGKNVSE FHRSSSVMEMYREVGLPPKQKISVFRVSSNAVIKPGTPLYAAHFRPGQYVDITAKTIGKGFQGVMKRWGFSGQPATHGHT KSHRRPGSISSSGVSKVFKGKKMPGRLGNVYRTVKGLKIWQINVKHNILYVHGSVPGHRNCLVKVSDTILANYQDDFKNP PFPTFFADSEELPDELYDEELFQFTEPSIALSES |
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