Gene
| Gene Model ID | habu1_s499_g02296 |
|---|---|
| Locus | habu1_scaffold499 : 71873 ... 127340 : + |
| To GenomeBrowser | habu1_scaffold499:71873..127340 |
| Genes list of scaffold | habu1_scaffold499 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| chromodomain y-like protein 2 | GO:0003824 GO:0005634 GO:0008152 GO:0035064 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s499_g02296.t1 | 1 | 1 | Chromo | 7 | 55 | 2.5e-17 | 62.2 | 1.1e-20 | 5.2e-17 | 61.2 |
| habu1_s499_g02296.t1 | 1 | 1 | ECH | 255 | 491 | 1.6e-33 | 115.8 | 4.3e-37 | 2.1e-33 | 115.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s499_g02296.t1 | gi|602631425|ref|XP_007422614.1| | PREDICTED: chromodomain Y-like protein 2-like [Python bivittatus] | 0.0 |
| habu1_s499_g02296.t1 | gi|637317209|ref|XP_008112135.1| | PREDICTED: chromodomain Y-like protein 2 [Anolis carolinensis] | 0.0 |
| habu1_s499_g02296.t1 | gi|698396249|ref|XP_009807637.1| | PREDICTED: chromodomain Y-like protein 2 [Gavia stellata] | 0.0 |
| habu1_s499_g02296.t1 | gi|706149563|ref|XP_010206309.1| | PREDICTED: chromodomain Y-like protein 2 [Colius striatus] | 0.0 |
| habu1_s499_g02296.t1 | gi|697505970|ref|XP_009681240.1| | PREDICTED: chromodomain Y-like protein 2 [Struthio camelus australis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.6 |
| Venom grand-1 | 0.1 |
| Pit, infrared sensing | 0.2 |
| Nose | 0.4 |
| Brain-1 | 3.9 |
| Eye | 0.3 |
| fetal fibroblast | 0.7 |
| venom gland-2 | 0.3 |
| Brain-2 | 4.3 |
| Spleen | 0.5 |
| Lung | 0.2 |
| Liver | 0.4 |
| Kidney | 0.8 |
| Pancreas | 0.5 |
| Small intestine | 0.2 |
| Large intestine | 0.2 |
| Stomach | 0.4 |
| heart | 0.4 |
| ovary | 2.0 |
| cheek muscle | 0.5 |
Transcript
| Transcript ID | habu1_s499_g02296.t1 |
|---|---|
| Definition | - |
>habu1_s499_g02296.t1 atgcagaggatgtatctgaaggtcgaaaggattgtagacaaaaggaagaataaaaagggcaaatgggaatatctcatacg gtggaaaggttatggaagcaacgaagacacatgggaaccagagcatcacttattacactgtgaggaattcattgatgaat tcaatggactacacgtcaccagggaaaagcgcgctaaacacgggaaacaagccaacatgcccaaatttttacgagaaagc agggggtcatccctggacaaaataacccacagaccctcagactctgggaaaagcaaaggactctcccataaaaggaagcg catgacctccacctttcaaaagccaaaaaaaagctacggagcgaaaccggcctcttcaaacgacagagctgctaaaaccg tatcgtaccggactacaccgagtggcttgcaaatcatgcccctgaaaaagccacaaaacggcttgccaaatggagatgcc cccttcgagaaggattctgctcacttggggaatggctctcaaaaggtcggcgaggagctaaatgaagctgaaggagaagc caatttgcccggcgttctcgaagtcaacaacgagacgcccatcatgaatggtatcggttcctctcttgaaaatggaggcc tgaatcttcataccactgtgaaacggaaactggagagtgaaaagggttacgtcttcgataagagactcaggtacagcgtg cgtcagaatgaaagcaactgtcggtttagagacattgttgtacgcaaagaagatggattcacacacatcctcctgtccag tcagacctcagataacaatgcactgactccagagatcatgaaggaggtccgaagagccctgtgcaacgcgtctgctgatg acagcaagctcctgctgctcagtgccgtaggcagtgtattttgtagcggcttggactattcctacctaattggaaggtta tccagcgaccgacggaaagaaagcacccggatcgctgaggctataagggattttgtgaaagcctttattcagtttaagaa gcccattgtggttgccatcaatggtcctgctctaggcttgggagcttcaattttaccactctgtgacattgtttgggcaa gtgaaaaggcctggttccaaacgccctacgcaaccattcggctcactccggcgggctgttcatcgtacacatttccacag atattgggtgttgcactggccaatgagatgctgttttgtggaaggaagctgacggcgcaagaggcctgcagcagagggct tgtctcccaagtcttttggcccaccacatttggacaggaagtgatgttgagggtaaaagaaatggcgtcctgcagtgccg tggttttagaagaatcaaaatgcctggttcggggttttctaaaatctggccttgaagatgtgaatgagaaagaatgtcag atgttaaagcagctctggagctcttccaaaggactagattcgttgttcagctatctccaagacaagatctatgaagtttg acattgttggaggggggaaaaaaagggagaagaatgttctgggatcagagtgatttcagatggtctccgggtttgagaag aatcacacgaaagccaaaatgaaaaaccagcaaatcctcccagaggcttttgtgaaagcatatctaacatctctgaggtt gcatcagtttccttgctgaattcaacgactcttcttagcaaggttgatttttctttgtggaaggaaaggcagatgtattg aaccagcctttggcaagaattgcatttgaacacccacgtggctggagagaaacatacattccacgtgccagaagcactat cggtaaccctttaaggcacaccacaaatcttacttctttggtcttcttcttcttttaattattattaattaacttattcc cgttattgtaagcagcttgtcacggcatcagtccaaatgactcagtttagaattcaacggtcctaaatcataattgtctg cctggcctactttaagaagatgtccatatttttggtttgtttgaccattaacaatagaagatacggtatgtgggggatat aatttataatggctgatggataaaaaaaaaacaattttgcaaaaaa |
|
Protein
| Protein ID | habu1_s499_g02296.t1 |
|---|---|
| Definition | - |
>habu1_s499_g02296.t1 MQRMYLKVERIVDKRKNKKGKWEYLIRWKGYGSNEDTWEPEHHLLHCEEFIDEFNGLHVTREKRAKHGKQANMPKFLRES RGSSLDKITHRPSDSGKSKGLSHKRKRMTSTFQKPKKSYGAKPASSNDRAAKTVSYRTTPSGLQIMPLKKPQNGLPNGDA PFEKDSAHLGNGSQKVGEELNEAEGEANLPGVLEVNNETPIMNGIGSSLENGGLNLHTTVKRKLESEKGYVFDKRLRYSV RQNESNCRFRDIVVRKEDGFTHILLSSQTSDNNALTPEIMKEVRRALCNASADDSKLLLLSAVGSVFCSGLDYSYLIGRL SSDRRKESTRIAEAIRDFVKAFIQFKKPIVVAINGPALGLGASILPLCDIVWASEKAWFQTPYATIRLTPAGCSSYTFPQ ILGVALANEMLFCGRKLTAQEACSRGLVSQVFWPTTFGQEVMLRVKEMASCSAVVLEESKCLVRGFLKSGLEDVNEKECQ MLKQLWSSSKGLDSLFSYLQDKIYEV |
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