Gene
| Gene Model ID | habu1_s499_g02298 |
|---|---|
| Locus | habu1_scaffold499 : 142136 ... 162546 : + |
| To GenomeBrowser | habu1_scaffold499:142136..162546 |
| Genes list of scaffold | habu1_scaffold499 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| atm interactor | GO:0005488 GO:0009987 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s499_g02298.t1 | 1 | 1 | CENP-N | 26 | 356 | 0.0 | 204.7 | 0.0 | 0.0 | 202.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s499_g02298.t1 | gi|602631421|ref|XP_007422612.1| | PREDICTED: ATM interactor [Python bivittatus] | 0.0 |
| habu1_s499_g02298.t1 | gi|327276507|ref|XP_003223011.1| | PREDICTED: ATM interactor [Anolis carolinensis] | 0.0 |
| habu1_s499_g02298.t1 | gi|530597702|ref|XP_005292377.1| | PREDICTED: ATM interactor [Chrysemys picta bellii] | 0.0 |
| habu1_s499_g02298.t1 | gi|591368976|ref|XP_007059323.1| | PREDICTED: ATM interactor [Chelonia mydas] | 0.0 |
| habu1_s499_g02298.t1 | gi|558160552|ref|XP_006122744.1| | PREDICTED: ATM interactor, partial [Pelodiscus sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.0 |
| Venom grand-1 | 0.7 |
| Pit, infrared sensing | 2.0 |
| Nose | 1.7 |
| Brain-1 | 5.2 |
| Eye | 1.9 |
| fetal fibroblast | 6.2 |
| venom gland-2 | 0.8 |
| Brain-2 | 3.5 |
| Spleen | 1.3 |
| Lung | 1.3 |
| Liver | 1.1 |
| Kidney | 0.9 |
| Pancreas | 0.9 |
| Small intestine | 1.2 |
| Large intestine | 1.1 |
| Stomach | 1.0 |
| heart | 1.2 |
| ovary | 27.6 |
| cheek muscle | 1.9 |
Transcript
| Transcript ID | habu1_s499_g02298.t1 |
|---|---|
| Definition | - |
>habu1_s499_g02298.t1 ggtttgggcggcaaatgtcctgaggagaacgaaagagaccccaaaatggcccagaagcggcggctgcggaacagcggcgg gcaggaccccccgtcgaaggtcttcatcatggatgaaacagtagctgaatatattagaagaactgtgctgcgaataccac gttcagaaacatcaaaaatgctgacttcatgggggtttctgtccgagactcaacttcagtctttaaaaattcatcatttt aaggaaaacatatctcaagcagttgttgaactttgtgaggagaaccaggcaactatcaaagatgcagcagagttagattt aatttacaactacacctatcaagacaaaaagagctggattgcttaccaaatgactaaaaaagatagtgaagattcggtta cttttaactgggcaaatttcaaaaagaaatttagatacgctctgctacctattttgaaaaataccactgtcagctttaaa gaatatgaagacaatgcagtatggattcgaattgcatggggaacaccgtatataaggcctaatcaatacaagccaaccta tatagtttaccattcacaaaccccttatgtctttataaccaattctagacttaagggtaatacatctttgctttttcagg ccctgttggctgctaccagttacaaagacatccatgaaatgggtctccgaagccattgcttagactctcttaaagttatt ttgcttaaaagattttgccagaattttcagacatacctccctcgacctctacaagaaaaaaacagtgccctggaaaacgt tgatccaaggataattcttgaagataaacttgaaaaggagagaattcagaaagttaatcaggacacttttggtgatggcc ctcaaccaaagttggaatttgcacaatacaagcttgaaacagtgttaaaaagtgaagaaataagcaccttgaatactgat gagccatttagatgtatgatcaagttttctagtcctcatcttctagaagcccttaagtctctagggccttctggaatagc agatgctcctctttcaccactactcacctgcatcactcgaaaagccaggaactattttaaaatcagagagaaaaaagatg atctttcacagaccaatagtacctttcagcacttcatgaaaatgcacgctgaaaagaagcataaatgcgacaaatgtacc aattcgtacggcactatatgggatttaaagcgccatgttttggactgtggcaagactttccagtgtacttgtggctgtcc atatgctagtaggacagcattgttatctcacatttatcggacacaacatgagatcccggttgaacacagggatccgccta gcaagaaaaggaaaactgaggcttcactatctaaccgcctgccggaagacaaaacaacaaacaagccctccgccaacatc tgccacagcagatgttccagcacggaggatttggagagctctgaaaccaagtctacggcttcttttgacgaccccagcca atcttatactattcagcaagcagaagcacagcccaaaaatgcaccaaagtttctcttgcctaagccgaaaatgggtttgg ttaagctccctgtaatgcagctgactcagttgcctatcttcgtgccagcaccgaactcttctgtgaagtccgttgtggtg gctgtggacgacagaggctccgttatgagtgctgttcacttaatgccaatgccagttggaattatgatacctgccctgga ggctgaaacccttgcctttaaaaccccctcagccctttccagaaccaaagctgccgatggtactaagccagttagtacag gcatccaggtgaatttaggcaaagctcctccccataacccagtccaggctctagaagccctgtgctataaaaacggaatc tgttccacaaatgttcaaactgacctatcttacgtttcccagagctttgtgccttcggcagcttggcctcccgattcctc ggtgtcctcgtgttctcagacagacctgactttcagttcccaaatgttgcttccggtgagcgtagagacacaaaccctgt tacccagcttaaagctgacttcctccatagctgctcagacagatgtgctcactcaggcttgcttccaacccggtgggatt tctcgggagactcagaccagcaagtcccaaaaaggtatgggtgagaacgtacacatggaccagaccgtcacgtgcagcag tcttttcagcagcgttaatgccgcattccccgattcaaacccaatggctcatcctggcggccccttgatggcagccaacc tgtgtcagaatatgcttccgcaaggaaactgcaaaactttgagcccggacacgaagtgtgagccgatgctcagcttcagc ccaccaacaaacggtattcttccccagcaaattatgacagacaatcagacgcaaaccatggagctgctgaacgacctgga aacgattttttccaataactcagcaggtcactcgttggataaccggagtcttttaacagatgctcactccagccctgaca ttcccttaagctccgtccctacccagaacgcagggatagattttgaccttgaggaattctttaccgcctccaacatccaa actcaaactgaagaggctgaatttggcaacttgaactcggtgccgcccttggagtccctagacattgaaacccaaacaga tttgttttcagaccacgccacccaatcctacacctctcggagtaattctaatttcttaggcttagaaatgtttgacacgc agacccagacggacttaaatttcttcctggacactccctacctgcctctggggaacatcttgaagccctctgcttttctg atgagcgccgactcttccaatacagaaacccaaacagaaatgagatgtcctgacagcgagatctccgatcatatgtcaga gagcaaagtccagctgaacagcgctgaaacgcaaaccatagacagctgtcttgataccctcggcagtttatttctcacca gcaacgagactcagacggttatggacgatttccttttggctgacttggcctggaatacgatggagtcgcagtttagttcc gtagagacacaaacctgtgcagaattgtgctctttgcttcaggggtccgacaaagccagctgttgaatgccgttctcaca cggcagcattttgaaggagaaaaggtgtctaaatgttcctttgccagagatctgtctcatatctaaagacagggcttcac agttatatttaaaatgttgtagggaaactctgcagctactgaaagatgtggaaaagcagcttctggagctggttggaagg agttggggaagggaagtgagaaataaaagtgaagcaagaaattaatgga |
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Protein
| Protein ID | habu1_s499_g02298.t1 |
|---|---|
| Definition | - |
>habu1_s499_g02298.t1 MAQKRRLRNSGGQDPPSKVFIMDETVAEYIRRTVLRIPRSETSKMLTSWGFLSETQLQSLKIHHFKENISQAVVELCEEN QATIKDAAELDLIYNYTYQDKKSWIAYQMTKKDSEDSVTFNWANFKKKFRYALLPILKNTTVSFKEYEDNAVWIRIAWGT PYIRPNQYKPTYIVYHSQTPYVFITNSRLKGNTSLLFQALLAATSYKDIHEMGLRSHCLDSLKVILLKRFCQNFQTYLPR PLQEKNSALENVDPRIILEDKLEKERIQKVNQDTFGDGPQPKLEFAQYKLETVLKSEEISTLNTDEPFRCMIKFSSPHLL EALKSLGPSGIADAPLSPLLTCITRKARNYFKIREKKDDLSQTNSTFQHFMKMHAEKKHKCDKCTNSYGTIWDLKRHVLD CGKTFQCTCGCPYASRTALLSHIYRTQHEIPVEHRDPPSKKRKTEASLSNRLPEDKTTNKPSANICHSRCSSTEDLESSE TKSTASFDDPSQSYTIQQAEAQPKNAPKFLLPKPKMGLVKLPVMQLTQLPIFVPAPNSSVKSVVVAVDDRGSVMSAVHLM PMPVGIMIPALEAETLAFKTPSALSRTKAADGTKPVSTGIQVNLGKAPPHNPVQALEALCYKNGICSTNVQTDLSYVSQS FVPSAAWPPDSSVSSCSQTDLTFSSQMLLPVSVETQTLLPSLKLTSSIAAQTDVLTQACFQPGGISRETQTSKSQKGMGE NVHMDQTVTCSSLFSSVNAAFPDSNPMAHPGGPLMAANLCQNMLPQGNCKTLSPDTKCEPMLSFSPPTNGILPQQIMTDN QTQTMELLNDLETIFSNNSAGHSLDNRSLLTDAHSSPDIPLSSVPTQNAGIDFDLEEFFTASNIQTQTEEAEFGNLNSVP PLESLDIETQTDLFSDHATQSYTSRSNSNFLGLEMFDTQTQTDLNFFLDTPYLPLGNILKPSAFLMSADSSNTETQTEMR CPDSEISDHMSESKVQLNSAETQTIDSCLDTLGSLFLTSNETQTVMDDFLLADLAWNTMESQFSSVETQTCAELCSLLQG SDKASC |
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