Gene
| Gene Model ID | habu1_s499_g02300 |
|---|---|
| Locus | habu1_scaffold499 : 164177 ... 172375 : - |
| To GenomeBrowser | habu1_scaffold499:164177..172375 |
| Genes list of scaffold | habu1_scaffold499 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s499_g02300.t1 | 1 | 1 | DUF4529 | 26 | 281 | 1.8e-21 | 76.1 | 5.6e-22 | 2.8e-18 | 65.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s499_g02300.t1 | gi|637317256|ref|XP_008112143.1| | PREDICTED: uncharacterized protein C16orf46 homolog isoform X4 [Anolis carolinensis] | 0.0 |
| habu1_s499_g02300.t1 | gi|637317244|ref|XP_008112140.1| | PREDICTED: uncharacterized protein C16orf46 homolog isoform X2 [Anolis carolinensis] | 0.0 |
| habu1_s499_g02300.t1 | gi|637317236|ref|XP_008112138.1| | PREDICTED: uncharacterized protein C16orf46 homolog isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s499_g02300.t1 | gi|530597704|ref|XP_005292378.1| | PREDICTED: uncharacterized protein C16orf46 homolog [Chrysemys picta bellii] | 8.0e-39 |
| habu1_s499_g02300.t1 | gi|591368978|ref|XP_007059324.1| | PREDICTED: uncharacterized protein C16orf46 homolog [Chelonia mydas] | 2.0e-36 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.7 |
| Venom grand-1 | 0.6 |
| Pit, infrared sensing | 0.7 |
| Nose | 2.0 |
| Brain-1 | 7.1 |
| Eye | 1.5 |
| fetal fibroblast | 0.1 |
| venom gland-2 | 0.1 |
| Brain-2 | 9.0 |
| Spleen | 2.1 |
| Lung | 0.3 |
| Liver | 0.2 |
| Kidney | 0.9 |
| Pancreas | 6.8 |
| Small intestine | 19.8 |
| Large intestine | 3.9 |
| Stomach | 0.4 |
| heart | 2.8 |
| ovary | 0.0 |
| cheek muscle | 1.6 |
Transcript
| Transcript ID | habu1_s499_g02300.t1 |
|---|---|
| Definition | - |
>habu1_s499_g02300.t1 gggcgtggcgggcgggcgggcgggcgggcagggaaggaggggaagcagcccgaggatcggccggacggcaggcgggatta tggggcaggaggcgggcaacctgccgtgacagcaactgttatgaattcctctggaccgaaccgaagcgacaacaacaact gtgacaaaggggccacaaagctgagaagcggggacacggagactcgctgcgtctacgccgatgagaagcgggagaggaat cagatttacacccttttgagcatcagcaacagtgtaaaggaggaagaggaaaggccctgggagtgcctgaacgggacagg atgggaggaagcggtccaaagctggagcaaaacagccccgtttgcttaccttcaattacaaaagagagtccgaaaacccc ggacgagtgagtccgccaatagatgcctctactgcttagatctgatgcaaggcgtggaaccggagcccaagaacattgtt caagtcaaatccgatttcaaactcaacccaagcgctgccgcaggtagccctccagaaaaacaacagacggtgctttattc taattcagtcacaactactactactgctgctgctgctgctgctgcttctgccccagatgagcctaaaaaggaaacagatt atagcagatggcactctcttcagatgtcccagggagaaaagaaaaggatgtccttaaaagaagcccaagcttctctgagt gaaaaaaagttatttctcatgaaagagaatctgctgttcccagcagagaaaaaaacagtgccaatcaaggaatatagcat tctgtcaccgggaaagccccaaagtctagaaaccgtcaaggccaaagagataaggagccacgagcctcttctgtggaatc agcctggcaccgaaatcactgctaagtcatcaatggtcctgccgcccctgaaggagacagcgctcaaacacagcctggat aactctccaaagaaaagaacaaagctgggaaagagttactccttacacatgctgtaagtccccgaaacggtctaagaagc caagaataagtaaaaccacctcaagtatatctcaccagagtatgtcagagtcgcttaagaaaaacgtgtcttggggaacc aaccaacaacccagcctggattgcaaattcaccaaaggagaacccatcgcgggcagcagaaaggctggggtttcctgctt caagccttacacctacatcccaatgatgaatgccaaccccgagggggaaagggcaagaggaaaattagactctattcaga cgttcctaggcgagaaaaggactttgccgataaaggaatatgaaatcaagtattct |
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Protein
| Protein ID | habu1_s499_g02300.t1 |
|---|---|
| Definition | - |
>habu1_s499_g02300.t1 MNSSGPNRSDNNNCDKGATKLRSGDTETRCVYADEKRERNQIYTLLSISNSVKEEEERPWECLNGTGWEEAVQSWSKTAP FAYLQLQKRVRKPRTSESANRCLYCLDLMQGVEPEPKNIVQVKSDFKLNPSAAAGSPPEKQQTVLYSNSVTTTTTAAAAA AASAPDEPKKETDYSRWHSLQMSQGEKKRMSLKEAQASLSEKKLFLMKENLLFPAEKKTVPIKEYSILSPGKPQSLETVK AKEIRSHEPLLWNQPGTEITAKSSMVLPPLKETALKHSLDNSPKKRTKLGKSYSLHML |
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