Gene
| Gene Model ID | habu1_s499_g02301 |
|---|---|
| Locus | habu1_scaffold499 : 199613 ... 204895 : - |
| To GenomeBrowser | habu1_scaffold499:199613..204895 |
| Genes list of scaffold | habu1_scaffold499 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| glycine cleavage system h mitochondrial | GO:0005739 GO:0005960 GO:0019464 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s499_g02301.t1 | 1 | 1 | GCV_H | 18 | 136 | 0.0 | 158.5 | 0.0 | 0.0 | 158.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s499_g02301.t1 | gi|602631427|ref|XP_007422615.1| | PREDICTED: glycine cleavage system H protein, mitochondrial [Python bivittatus] | 0.0 |
| habu1_s499_g02301.t1 | gi|564229450|ref|XP_006259167.1| | PREDICTED: glycine cleavage system H protein, mitochondrial [Alligator mississippiensis] | 0.0 |
| habu1_s499_g02301.t1 | gi|637317264|ref|XP_008112145.1| | PREDICTED: glycine cleavage system H protein, mitochondrial [Anolis carolinensis] | 0.0 |
| habu1_s499_g02301.t1 | gi|558160548|ref|XP_006122743.1| | PREDICTED: glycine cleavage system H protein, mitochondrial [Pelodiscus sinensis] | 0.0 |
| habu1_s499_g02301.t1 | gi|686598882|ref|XP_009275614.1| | PREDICTED: glycine cleavage system H protein, mitochondrial [Aptenodytes forsteri] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 78.9 |
| Venom grand-1 | 263.1 |
| Pit, infrared sensing | 112.0 |
| Nose | 70.6 |
| Brain-1 | 40.5 |
| Eye | 118.8 |
| fetal fibroblast | 74.3 |
| venom gland-2 | 191.8 |
| Brain-2 | 47.7 |
| Spleen | 306.3 |
| Lung | 158.4 |
| Liver | 521.9 |
| Kidney | 469.8 |
| Pancreas | 948.1 |
| Small intestine | 771.9 |
| Large intestine | 167.2 |
| Stomach | 208.7 |
| heart | 205.2 |
| ovary | 11.4 |
| cheek muscle | 258.3 |
Transcript
| Transcript ID | habu1_s499_g02301.t1 |
|---|---|
| Definition | - |
>habu1_s499_g02301.t1 caacgcgggctggcaaaacaagtgaaccgcggagcgtagcaagcctgccttccttccttccaggcaaggctgagcttcgg atgcagagcgaatgtcgtttttagtaggctttcaagccgagaaacgttaccaggaagctcgtcggtttacagacaagcac gaatggatctccgttgaaaacggtatcggaacgataggaattagcaactttgcacaggaagcactaggcgatgttgttta ttgcagtcttccagaaattggaacaaagctgaacaaacaagatgaatttggagccttggaaagtgtgaaggctgctagtg aaatctactcccccatcacgggagaagtcatagacattaacacggcccttgctgataatcctggcctggtcaacaaatct tgttaccaagatggttggcttatccaaatgactgtggataatccttctgaactggacgatctcttgactgaagatgcgta tgaaaaatacatcaaatccattgaggaatagctagaaggtgccaggctaagccagtgccaactnnnnnnnnnnnnnnnnn nnnnnnnnnntcaaattgcgcgaaaggcagtccacaaatgtctgcaaaatcaaaacgttggtccgcttctctttctaggc agcatcaggaataatttcgacttttctccccctccagtctgatgaatataattccgaggtttgaagtccataattccttc ttgggtagagtgacctttgttgctgaaatgaacccagaagggttgataagaatagatctggaaaaacgatgcgacagcct taattccaccgcaccacaacttctgctttttatttgtacagattttcttcctttttcttcttccaccagctttccctggg cgtctgttttcagtcggctttttggtcacctaccagaagctctgctgctgcctttggtattagtgaaagtcctcagagat tagatggtccgaaagggcaagtgctgggctggaggcgtgcgagacctccagctaatctttcctgccttgcagcagataag atagcagaagttaataaaaaatcctgactttaccaagtgt |
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Protein
| Protein ID | habu1_s499_g02301.t1 |
|---|---|
| Definition | - |
>habu1_s499_g02301.t1 MSFLVGFQAEKRYQEARRFTDKHEWISVENGIGTIGISNFAQEALGDVVYCSLPEIGTKLNKQDEFGALESVKAASEIYS PITGEVIDINTALADNPGLVNKSCYQDGWLIQMTVDNPSELDDLLTEDAYEKYIKSIEE |
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