Gene
Gene Model ID | habu1_s499_g02306 |
---|---|
Locus | habu1_scaffold499 : 513185 ... 549408 : - |
To GenomeBrowser | habu1_scaffold499:513185..549408 |
Genes list of scaffold | habu1_scaffold499 |
Annotation by Blast2GO
Annotation | GO |
---|---|
solute carrier family 12 member 4 | GO:0005765 GO:0006812 GO:0015379 GO:0016021 GO:0019901 GO:1902476 |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
habu1_s499_g02306.t1 | 2 | 1 | AA_permease | 133 | 306 | 0.0 | 204.1 | 9.1e-28 | 4.5e-24 | 84.6 |
habu1_s499_g02306.t1 | 1 | 1 | AA_permease_2 | 425 | 659 | 1.1e-16 | 60.4 | 3.9e-20 | 1.9e-16 | 59.6 |
habu1_s499_g02306.t1 | 2 | 2 | AA_permease | 428 | 705 | 0.0 | 204.1 | 3.7e-40 | 1.8e-36 | 125.5 |
habu1_s499_g02306.t1 | 1 | 1 | KCl_Cotrans_1 | 963 | 992 | 2.3e-16 | 58.9 | 1.1e-19 | 5.4e-16 | 57.7 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
habu1_s499_g02306.t1 | gi|602638594|ref|XP_007426125.1| | PREDICTED: solute carrier family 12 member 4 [Python bivittatus] | 0.0 |
habu1_s499_g02306.t1 | gi|327276487|ref|XP_003223001.1| | PREDICTED: solute carrier family 12 member 4 [Anolis carolinensis] | 0.0 |
habu1_s499_g02306.t1 | gi|558153243|ref|XP_006121167.1| | PREDICTED: solute carrier family 12 member 4 isoform X1 [Pelodiscus sinensis] | 0.0 |
habu1_s499_g02306.t1 | gi|641758212|ref|XP_008165134.1| | PREDICTED: solute carrier family 12 member 4 isoform X1 [Chrysemys picta bellii] | 0.0 |
habu1_s499_g02306.t1 | gi|558153247|ref|XP_006121168.1| | PREDICTED: solute carrier family 12 member 4 isoform X2 [Pelodiscus sinensis] | 0.0 |
Expression profile
Libraries | FPKM |
---|---|
>Adult | |
Venom fang forming tissue | 25.3 |
Venom grand-1 | 11.0 |
Pit, infrared sensing | 25.0 |
Nose | 10.9 |
Brain-1 | 3.6 |
Eye | 10.6 |
fetal fibroblast | 41.8 |
venom gland-2 | 4.4 |
Brain-2 | 3.7 |
Spleen | 15.2 |
Lung | 23.3 |
Liver | 4.1 |
Kidney | 4.7 |
Pancreas | 3.1 |
Small intestine | 4.4 |
Large intestine | 18.2 |
Stomach | 7.2 |
heart | 13.8 |
ovary | 12.5 |
cheek muscle | 11.2 |
Transcript
Transcript ID | habu1_s499_g02306.t1 |
---|---|
Definition | - |
>habu1_s499_g02306.t1 ggcggctgctgctgctccggccaagccccgggcgcggcggcggcggcgcttcagccaggcgcttcagccaggcgggggct tctctcccgacggcccgccgcggccatgccgcacttcacggtggtgccggtggaggacaaggcgcgggccggctacgacg ccttggaggggctgagctgggtggactacagccagcccggggaggacggggcgccccgccagcgcgacccctacgactcg gtcagctccgacggacatggaaatcataaagaaagtagccccttcctcaacacgccagatcaaggcaaaggagattacta tgaccgaaacttggctttatttgaggaagaactggatattcgccccaaagtgtcgtctttattgggcaaattggtcagct acacaaacctcactcaaggagccaaggaacacgaagaagcggaaaatgccgaaggcgcgagaagtaaagtttcaaaatct cccagcatggggaccctgatgggtgtctacctgccatgcatgcagaatatttttggggttatcctctttcttcggctgac atggatagtgggaacagcaggtgtcgtccaggccttccttattgtcttaatctgctgctgctgtaccatgctgacagcta tatcaatgagtgcaattgccacaaatggtgtcgttccagctggtggttcctacttcatgatttcaagatcattgggtcct gaatttggaggtgctgtgggactgtgtttctacttgggaaccacatttgcaggtgccatgtacatcctgggcgccattga gatcctactaacatatattgctccccaggctgccattttccatccaactggggcccatgatacttccagtgccaccctga ataacatgcgagtctatgggaccttatttctcaccttcatggctcttgtagtctttgtgggtgtaaaatacgttaacaag ttcgcttcactctttttggcttgcgtcatcatttccatcttatccatctatgctgggtcaattaaatccatcttcagtcc accttttttcccggtgtgcatgttgggcaaccggactctttccagggaccagtttgatatttgtgccaaaacgatggtgg tcaacaatgtgacggtgcccaccgatctcaccaacctcttttgcccgggttacaacatcacctctggccactgcgatgaa tattttcatttaaataacgtaactgagattgtcggtatcccgggagctgcaagtggaattttgaaagataatgtctggag taattacttggagaaagacgagatcctggaaagagcgggctgtccgtctgttgacgtagctggaaataagaacaacctcc acttgtacgtctatgcggacattgcaacttccttcactgtcctcgtgggcatctttttcccctctgtgactggcatcatg gccggctccaaccgatcaggagacctcaaggatgcccaaaagtctattccagtgggaaccattcttgctattgccaccac atctcttgtctatttcagctgtgtattgttgtttggagcttgcattgaaggcgttgttcttcgagataagtatggtgatg ccgtgaacaagaacttagtggtgggcacgctggcctggcccacgccgtgggtcatagtgattgggtccttcttctctaca tgtggagcaggtttgcaaagtctcactggagctccacgtctccttcaagccatcgccaaggacaacattattccattcct cagggtgtttggtcacggaaaggcaaatggagaacccacctgggctcttctgctcacagccctgattgccgaacttggca ttctcattgcctcccttgatatggtggccccaatcctttctatgtttttcctaatgtgttacctgtttgtcaacctggcc tgtgcggtgcagactctcttaagaactccaaactggcgtcccagatttaagtattaccattgggccctgtccttcttagg gatgagtatctgccttgccctgatgttcatctcctcctggtattacgctttagtggccatgctcattgccggcatgatct ataagtacattgaatatcagggggcagagaaggaatggggtgatggtatccggggcctgtctctaagtgctgcccgctat gctttgctgagattggaagaaggtcctccccataccaagaactggagaccccaattgttggtattgctgaaactggatga ggatttgcatgtgaaataccccaggctcttgacatttgcttcacaactgaaggccgggaaggggttgaccattgttggga ccgcaatacaaggcaactttctggaaagttacggagaagcccaggcagctgagcagaccatcaagaatatgattgagatt gagaaagtcaaaggattttgccaagttgttgtagctaataaggtccgtgatggcattgcccacttgatacagtcctgtgg attgggtggcatgaagcacaacacagtggttttggggtggccctatggctggaggcagagtgaagatcctagatcttgga agacctttatagacactgtccgttgcacaactgcagcccacctcgccttgcttgtgccgaaaaatgtgtccttctatccc agcaatcatgagcgttacaatgaagggaacattgacgtgtggtggatcgtgcacgatggaggcatgttgatgctgcttcc gtttctcctcaaacagcataaagtttggcgaaaatgcaaaatgcgaattttcaccgtggcccagatggacgacaacagca tccaaatgaagaaagatctggccgtctttctttaccacctccgaattgaggctgatgtagaagtggtggaaatgcaaaac agtgacatctcggcctacacttacgagcggaccttgatgatggaacagagatctcagatgttaaggcagatgcggctgac caaaacggaaagagagagggaggctcagctggtgaaagacagacactcaatcataagattagagagcctttactccgacg aggaggatgaaggggaagcaatcccagaaaagatccagatgacttggacgaaagctaaacacgactctgagaatcagatc ggaaatagtgtggtggagcacttcaaagaacttatcagtcttaaacctgaccagtcaaatgtccgaaggatgcacactgc tgtgaagctgaatgaagtcattgtcaatcggtcccatgatgctcgacttgttcttctcaacatgcctggtccacccaaaa acacagagggggatgaaaactacatggaatttcttgaagttttaactgaaggtttggagcgtgtgttgctggttcgaggt ggaggccgagaagtcattactatttactcctgatccaacaagattcgctctagttactgttctacctgcttggcgagaaa agacattacagatggagaggattctgacttctcttgctttctgttccttggttttcacacgtgcgcaccaatacactaca gatgtgaatttgaactc |
Protein
Protein ID | habu1_s499_g02306.t1 |
---|---|
Definition | - |
>habu1_s499_g02306.t1 MPHFTVVPVEDKARAGYDALEGLSWVDYSQPGEDGAPRQRDPYDSVSSDGHGNHKESSPFLNTPDQGKGDYYDRNLALFE EELDIRPKVSSLLGKLVSYTNLTQGAKEHEEAENAEGARSKVSKSPSMGTLMGVYLPCMQNIFGVILFLRLTWIVGTAGV VQAFLIVLICCCCTMLTAISMSAIATNGVVPAGGSYFMISRSLGPEFGGAVGLCFYLGTTFAGAMYILGAIEILLTYIAP QAAIFHPTGAHDTSSATLNNMRVYGTLFLTFMALVVFVGVKYVNKFASLFLACVIISILSIYAGSIKSIFSPPFFPVCML GNRTLSRDQFDICAKTMVVNNVTVPTDLTNLFCPGYNITSGHCDEYFHLNNVTEIVGIPGAASGILKDNVWSNYLEKDEI LERAGCPSVDVAGNKNNLHLYVYADIATSFTVLVGIFFPSVTGIMAGSNRSGDLKDAQKSIPVGTILAIATTSLVYFSCV LLFGACIEGVVLRDKYGDAVNKNLVVGTLAWPTPWVIVIGSFFSTCGAGLQSLTGAPRLLQAIAKDNIIPFLRVFGHGKA NGEPTWALLLTALIAELGILIASLDMVAPILSMFFLMCYLFVNLACAVQTLLRTPNWRPRFKYYHWALSFLGMSICLALM FISSWYYALVAMLIAGMIYKYIEYQGAEKEWGDGIRGLSLSAARYALLRLEEGPPHTKNWRPQLLVLLKLDEDLHVKYPR LLTFASQLKAGKGLTIVGTAIQGNFLESYGEAQAAEQTIKNMIEIEKVKGFCQVVVANKVRDGIAHLIQSCGLGGMKHNT VVLGWPYGWRQSEDPRSWKTFIDTVRCTTAAHLALLVPKNVSFYPSNHERYNEGNIDVWWIVHDGGMLMLLPFLLKQHKV WRKCKMRIFTVAQMDDNSIQMKKDLAVFLYHLRIEADVEVVEMQNSDISAYTYERTLMMEQRSQMLRQMRLTKTEREREA QLVKDRHSIIRLESLYSDEEDEGEAIPEKIQMTWTKAKHDSENQIGNSVVEHFKELISLKPDQSNVRRMHTAVKLNEVIV NRSHDARLVLLNMPGPPKNTEGDENYMEFLEVLTEGLERVLLVRGGGREVITIYS |