Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s499_g02307
Locus habu1_scaffold499 : 555567 ... 569758 : -
To GenomeBrowser habu1_scaffold499:555567..569758
Genes list of scaffold habu1_scaffold499

Annotation by Blast2GO
Annotation GO
dipeptidase 2 GO:0008237 GO:0008238 GO:0016020

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s499_g02307.t2 1 1 Peptidase_M19 32 354 0.0 361.7 0.0 0.0 361.5

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 1.2
Venom grand-1 1.7
Pit, infrared sensing 5.0
Nose 0.5
Brain-1 2.0
Eye 0.6
fetal fibroblast 0.1
venom gland-2 2.7
Brain-2 0.4
Spleen 2.0
Lung 22.6
Liver 3.2
Kidney 0.6
Pancreas 1.0
Small intestine 0.3
Large intestine 2.6
Stomach 0.9
heart 5.0
ovary 0.7
cheek muscle 3.5

Transcript
Transcript IDhabu1_s499_g02307.t1
Definition-
>habu1_s499_g02307.t1
aatggttaaaggaatgtaggcaaatgataagcatggtgtgtctctccacacaaccctctctgcaattccattgaagccaa
cgatgtaaaacaaagcaagactttgcttgtaggcggccttagatcgcagaagagagccatatcttgaaagggacagaaac
tgaacctgttaaagcaggctgattgcgtaaagattttcagagattgattacctcttttcactgggtttgaaaccctttcc
gtgaagagtctcctcgaacgtggacgaaaacagtgctcattttttatccaagaaaatatatatatatatttggaggcatc
tcatttagcttgtggacttccttgggatccagtgatggtggtgcttctggggctactctttctgctggtggacatttggg
gatccagagcaactaatgaatccttgagaactgaagttcttgacctcatggcggcatctcggctaatagacggacacaat
gatctgcccatgaaattaagatggttccacgagaacaagctaagcacaattgacttgaaaaaactcgaaaccaccaacac
aaacattgagaagctccaggctggccatgttggggtgcagttttggtcagtatatgttctctgcagtgcacaaaacaaag
atgctgtacgtttgacactagaacaaattgatgttgtcagacggatgtgtgaagactatgaagaattggaactgctgaca
tcttcagagggcatagagaatctcagcaacaataagatcgcctgcttgatcggcattgaaggcggccattccattgacag
cagcctggccaccttgaggatgttctatgagctgggtgttcggtacatgactttgacccacacttgcaacactccctggg
cagaatcttcaacaaaaggcagaaataatttctatcctgatgttgacggcttgactccttttggcatcgaagtggtgaag
gagatgaatcgcctggggatgatggtagacctatctcacacctctcatgagacagcaaaaactgttcttagggtttcaag
agcacctgtcattttcagccattcttctgcctattcggtctgccaccactccaggaatgttcctgatgacattctcctaa
agcttaaagagaaccatggaattataatggtgacgttccctgagaagtttttggcctgtggaaataagacagttgacatc
tcaactgttgcagatcactttgatcacataaagaaaattgcaggttcattttcaataggaattggcggtgactatgatgg
agaattccgatttcctgagggactggaagatgtttcaaaatatccagacgtaattgaagaactgctgaggagaggctgga
ccaaggaagaacttcgtgggattctgagggagaacttacttcgtgtcttcaaagaagtcgaaaatgtgaagaagagctgg
caagagaaggcaagtgaagtggaaatcccacttgagcaggtggatcaaacctgtcgcctggagctgaagcctccaacttc
gtcaaggaacggctcctgcagactgctttgcatggggctactcaaaagccttgtattcaccgtaggaatgtacatgatgt
tgccctgaacttgattctgacaacggcgccaaggacggattcttccaaagttaaaatagaaacaacactactcatagtca
caaagcctggaacggccaatggatcctgcttcatttgcacaaagctgctttcccaagaggcaactggactttcttgggtt
tttcccttgaaaacggtttcacttctcatcccagaagcttcttccgttcacggatgagaagtggaatgttttcaaaggaa
aaaactaagaaagcccaattgccttttgggacaaccgtgatctggaggattgagaatcttcacacaacgagaagattttt
ggaacgccaaaggaaaagctgcccaaacagagccatcatttccataaacatcacatatggcaccgacacgctcagttcgg
aatggaattcagtcacattcaataactcccagcacactccggtgatatttaattcctgttaaatcctgtggaacttcctt
ctccaagtaaatatgaatgggttagtactgtga
Transcript IDhabu1_s499_g02307.t2
Definition-
>habu1_s499_g02307.t2
cgatgactgttgcagtttgcaggctgattgcgtaaagattttcagagattgattacctcttttcactgggtttgaaaccc
tttccgtgaagagtctcctcgaacgtggacgaaaacagtgctcattttttatccaagaaaatatatatatatatttggag
gcatctcatttagcttgtggacttccttgggatccagtgatggtggtgcttctggggctactctttctgctggtggacat
ttggggatccagagcaactaatgaatccttgagaactgaagttcttgacctcatggcggcatctcggctaatagacggac
acaatgatctgcccatgaaattaagatggttccacgagaacaagctaagcacaattgacttgaaaaaactcgaaaccacc
aacacaaacattgagaagctccaggctggccatgttggggtgcagttttggtcagtatatgttctctgcagtgcacaaaa
caaagatgctgtacgtttgacactagaacaaattgatgttgtcagacggatgtgtgaagactatgaagaattggaactgc
tgacatcttcagagggcatagagaatctcagcaacaataagatcgcctgcttgatcggcattgaaggcggccattccatt
gacagcagcctggccaccttgaggatgttctatgagctgggtgttcggtacatgactttgacccacacttgcaacactcc
ctgggcagaatcttcaacaaaaggcagaaataatttctatcctgatgttgacggcttgactccttttggcatcgaagtgg
tgaaggagatgaatcgcctggggatgatggtagacctatctcacacctctcatgagacagcaaaaactgttcttagggtt
tcaagagcacctgtcattttcagccattcttctgcctattcggtctgccaccactccaggaatgttcctgatgacattct
cctaaagcttaaagagaaccatggaattataatggtgacgttccctgagaagtttttggcctgtggaaataagacagttg
acatctcaactgttgcagatcactttgatcacataaagaaaattgcaggttcattttcaataggaattggcggtgactat
gatggagaattccgatttcctgagggactggaagatgtttcaaaatatccagacgtaattgaagaactgctgaggagagg
ctggaccaaggaagaacttcgtgggattctgagggagaacttacttcgtgtcttcaaagaagtcgaaaatgtgaagaaga
gctggcaagagaaggcaagtgaagtggaaatcccacttgagcaggtggatcaaacctgtcgcctggagctgaagcctcca
acttcgtcaaggaacggctcctgcagactgctttgcatggggctactcaaaagccttgtattcaccgtaggaatgtacat
gatgttgccctgaacttgattctgacaacggcgccaaggacggattcttccaaagttaaaatagaaacaacactactcat
agtcacaaagcctggaacggccaatggatcctgcttcatttgcacaaagctgctttcccaagaggcaactggactttctt
gggtttttcccttgaaaacggtttcacttctcatcccagaagcttcttccgttcacggatgagaagtggaatgttttcaa
aggaaaaaactaagaaagcccaattgccttttgggacaaccgtgatctggaggattgagaatcttcacacaacgagaaga
tttttggaacgccaaaggaaaagctgcccaaacagagccatcatttccataaacatcacatatggcaccgacacgctcag
ttcggaatggaattcagtcacattcaataactcccagcacactccggtgatatttaattcctgttaaatcctgtggaact
tccttctccaagtaaatatgaatgggttagtactgtga

Protein
Protein IDhabu1_s499_g02307.t1
Definition-
>habu1_s499_g02307.t1
MVVLLGLLFLLVDIWGSRATNESLRTEVLDLMAASRLIDGHNDLPMKLRWFHENKLSTIDLKKLETTNTNIEKLQAGHVG
VQFWSVYVLCSAQNKDAVRLTLEQIDVVRRMCEDYEELELLTSSEGIENLSNNKIACLIGIEGGHSIDSSLATLRMFYEL
GVRYMTLTHTCNTPWAESSTKGRNNFYPDVDGLTPFGIEVVKEMNRLGMMVDLSHTSHETAKTVLRVSRAPVIFSHSSAY
SVCHHSRNVPDDILLKLKENHGIIMVTFPEKFLACGNKTVDISTVADHFDHIKKIAGSFSIGIGGDYDGEFRFPEGLEDV
SKYPDVIEELLRRGWTKEELRGILRENLLRVFKEVENVKKSWQEKASEVEIPLEQVDQTCRLELKPPTSSRNGSCRLLCM
GLLKSLVFTVGMYMMLP
Protein IDhabu1_s499_g02307.t2
Definition-
>habu1_s499_g02307.t2
MVVLLGLLFLLVDIWGSRATNESLRTEVLDLMAASRLIDGHNDLPMKLRWFHENKLSTIDLKKLETTNTNIEKLQAGHVG
VQFWSVYVLCSAQNKDAVRLTLEQIDVVRRMCEDYEELELLTSSEGIENLSNNKIACLIGIEGGHSIDSSLATLRMFYEL
GVRYMTLTHTCNTPWAESSTKGRNNFYPDVDGLTPFGIEVVKEMNRLGMMVDLSHTSHETAKTVLRVSRAPVIFSHSSAY
SVCHHSRNVPDDILLKLKENHGIIMVTFPEKFLACGNKTVDISTVADHFDHIKKIAGSFSIGIGGDYDGEFRFPEGLEDV
SKYPDVIEELLRRGWTKEELRGILRENLLRVFKEVENVKKSWQEKASEVEIPLEQVDQTCRLELKPPTSSRNGSCRLLCM
GLLKSLVFTVGMYMMLP

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