Gene
| Gene Model ID | habu1_s499_g02308 |
|---|---|
| Locus | habu1_scaffold499 : 585099 ... 602263 : + |
| To GenomeBrowser | habu1_scaffold499:585099..602263 |
| Genes list of scaffold | habu1_scaffold499 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| galanin receptor type 1-like | GO:0004930 GO:0007186 GO:0016021 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s499_g02308.t1 | 1 | 1 | 7tm_1 | 53 | 311 | 0.0 | 203.9 | 0.0 | 0.0 | 203.6 |
| habu1_s499_g02308.t1 | 1 | 1 | 7TM_GPCR_Srw | 73 | 329 | 4.2e-07 | 29.3 | 6.2e-09 | 1.3e-05 | 24.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s499_g02308.t1 | gi|602638614|ref|XP_007426134.1| | PREDICTED: galanin receptor type 1-like [Python bivittatus] | 0.0 |
| habu1_s499_g02308.t1 | gi|327276523|ref|XP_003223019.1| | PREDICTED: galanin receptor type 1-like [Anolis carolinensis] | 0.0 |
| habu1_s499_g02308.t1 | gi|564260935|ref|XP_006269371.1| | PREDICTED: galanin receptor type 1-like [Alligator mississippiensis] | 0.0 |
| habu1_s499_g02308.t1 | gi|530592348|ref|XP_005289807.1| | PREDICTED: galanin receptor type 1-like [Chrysemys picta bellii] | 0.0 |
| habu1_s499_g02308.t1 | gi|591358055|ref|XP_007054046.1| | PREDICTED: galanin receptor type 1-like [Chelonia mydas] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.0 |
| Nose | 0.0 |
| Brain-1 | 0.2 |
| Eye | 0.1 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.1 |
| Brain-2 | 0.0 |
| Spleen | 0.0 |
| Lung | 0.0 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.0 |
| Large intestine | 0.0 |
| Stomach | 0.3 |
| heart | 0.1 |
| ovary | 0.3 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s499_g02308.t1 |
|---|---|
| Definition | - |
>habu1_s499_g02308.t1 agcttggatcaacaacttccaccatttgtaggcgaaacatacaggtccattgttttcctggaaacatcccccaaagtggg gccacctcccctgaagagagcccccatggaggaggtagccaccaatgtcaccttttgcaccactgatatggttttcaagc aagccaatgcttctgcttgttggccaagcatgacgggagctggaccagagacagtgattatccccgtgctgtttggactg atctttctactggggatggtggggaacacactggtgctggtggtgcttggccgtctcccaccaggtggacgcccatcccg cagtgccaccaacattttcatcctcaacttgagcattgcggacttctccttccttctcttctgtgtcccattccaggcca ccatttactccctgccagagtggatctttggagcctttttctgtaagtgggtgcactatctcgtcatggccaccatgctt gtcagcatcttcaccttggtggccatgtcagtggaccggtacattgctgtggtgcacgccaagcgctccctgtgcattcg gagcaaacgtaatgccactcttggggtgggcgccatctggttcctctctctcctctttgccatcccggtggctgagcacc aggaacttttaagcgggcaccagcaggcacccaacagctccttctgctgggaacactggcctggcaatccaggagccaag cagatgtacaaggtgaccatcttcgtggtgggttatctgctacctctggtgctcatcacatgctgctacaccaaggtttt atatcaccttcacaaaaaagtgaagaatatttccaggaagtcagaaagatcaaagagaaagacggcccagaccgtcctgc tggttgttgccgtcttcctgatctcctggctcccccaccacatcatcacaatttgggcagaatttgggcagttccccctg aacaatatctccttcaccttccgcatcatctcccattgcttggcctacgggaactcctgcatcaaccccatcatctacgc ttttctctcggagaatttccgcaatgcctgccgtcaagtcttcacgtgcaagttcctccttcagccagcccctgccgaca agctgttgctaaatggttactaatctgctcgctcggcaatgctagctgtggactggtccaaaaaatcagatgcttagctt gaagtgaattgtagttcctgaaagctgatgtgttttaatacattttggtagccagaaggttaacagactccagatttttt tcctataacaaactagtatggttctgctcccacaatgtttgaccaaaaataaagtgagcttttgatatatggttt |
|
Protein
| Protein ID | habu1_s499_g02308.t1 |
|---|---|
| Definition | - |
>habu1_s499_g02308.t1 MEEVATNVTFCTTDMVFKQANASACWPSMTGAGPETVIIPVLFGLIFLLGMVGNTLVLVVLGRLPPGGRPSRSATNIFIL NLSIADFSFLLFCVPFQATIYSLPEWIFGAFFCKWVHYLVMATMLVSIFTLVAMSVDRYIAVVHAKRSLCIRSKRNATLG VGAIWFLSLLFAIPVAEHQELLSGHQQAPNSSFCWEHWPGNPGAKQMYKVTIFVVGYLLPLVLITCCYTKVLYHLHKKVK NISRKSERSKRKTAQTVLLVVAVFLISWLPHHIITIWAEFGQFPLNNISFTFRIISHCLAYGNSCINPIIYAFLSENFRN ACRQVFTCKFLLQPAPADKLLLNGY |
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