Gene
| Gene Model ID | habu1_s499_g02310 |
|---|---|
| Locus | habu1_scaffold499 : 606949 ... 620716 : + |
| To GenomeBrowser | habu1_scaffold499:606949..620716 |
| Genes list of scaffold | habu1_scaffold499 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s499_g02310.t1 | 1 | 1 | Dus | 15 | 333 | 0.0 | 186.0 | 0.0 | 0.0 | 185.2 |
| habu1_s499_g02310.t1 | 1 | 1 | dsrm | 368 | 432 | 3.5e-10 | 40.2 | 5.3e-13 | 1.1e-09 | 38.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s499_g02310.t1 | gi|602638596|ref|XP_007426126.1| | PREDICTED: tRNA-dihydrouridine(20) synthase [NAD(P)+]-like isoform X1 [Python bivittatus] | 0.0 |
| habu1_s499_g02310.t1 | gi|602638599|ref|XP_007426127.1| | PREDICTED: tRNA-dihydrouridine(20) synthase [NAD(P)+]-like isoform X2 [Python bivittatus] | 0.0 |
| habu1_s499_g02310.t1 | gi|602638601|ref|XP_007426128.1| | PREDICTED: tRNA-dihydrouridine(20) synthase [NAD(P)+]-like isoform X3 [Python bivittatus] | 0.0 |
| habu1_s499_g02310.t1 | gi|602638603|ref|XP_007426129.1| | PREDICTED: tRNA-dihydrouridine(20) synthase [NAD(P)+]-like isoform X4 [Python bivittatus] | 0.0 |
| habu1_s499_g02310.t1 | gi|602638605|ref|XP_007426130.1| | PREDICTED: tRNA-dihydrouridine(20) synthase [NAD(P)+]-like isoform X5 [Python bivittatus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 3.1 |
| Venom grand-1 | 3.8 |
| Pit, infrared sensing | 3.1 |
| Nose | 4.3 |
| Brain-1 | 3.9 |
| Eye | 4.3 |
| fetal fibroblast | 9.4 |
| venom gland-2 | 4.2 |
| Brain-2 | 4.9 |
| Spleen | 4.2 |
| Lung | 4.1 |
| Liver | 2.8 |
| Kidney | 4.5 |
| Pancreas | 2.7 |
| Small intestine | 4.1 |
| Large intestine | 3.7 |
| Stomach | 3.3 |
| heart | 6.6 |
| ovary | 8.8 |
| cheek muscle | 6.1 |
Transcript
| Transcript ID | habu1_s499_g02310.t1 |
|---|---|
| Definition | - |
>habu1_s499_g02310.t1 atgggaaccggcgtctgctgattccaaagacatcatgccaatgaaccacatagccctcagtttcacaaataaagcaatac tggcgcccatggtgcgggttgggaccctgccgatgagactgctggctttggattatggtgctgacattgtgtattgtgag gagctgattgacataaagatgcttcagtgcaaaagagttgtaaatgatattcttggaacggtggactttgttgcccccaa tgagagagtggtgttcaggacttgtgcgagagaaaaaaaccacgttgtttttcaaatgggcacagctgatgctgagagag ccttggcggtagccaaacttgtagaggatgacatcgctggcatcgatgtcaacatgggatgccccaaagaatattccaca aagggcggaatgggagcggcgctcttgtctgatccggacagaatagaatccattttgactgcacttgtcaagggtgtgtc taagccggtaacttgcaaaatccgaattttgtcatcggaagaagaaactctaagattagtgaagaggatagagcaggcgg gagttgctgctattgctgttcatggaaggaagaaagaggagaggcctcagcaccctgtccactgcgatgtgatcaaagcc atctctgaggtagtttccatcccggtaatagccaatggaggatcctacgatttcatcaaagaatattctgacctccggat cttccaggaagcgacttcagcatcttccgtaatggtcgcccgggctgccatgtggaacccctccatcttcaggaaggaag gctctttgcccctgaaggacatcatggaggaatatatcaaatacgcagtgagatatgacaatcacttcaccaatacaaaa tattgcttgtgccagatgttaagggagcaattagaaaacgcacaaggaaagaagctgcatgccgcacagtccttgcagga aatctgtgaggttttcgagatgagtagtttcttccaagaagcatctgatttactggagaagaaaaaagtttcactacaag tcaagagcccaaataatgatgatcaccctgaagacacagatgtcattaaaatggcagttaagtttgataaacgagagtat cccccacaaattacacccaaaatgcatcttctggaatggtgcaggagagagaagctggttcaacctgcttatgaaacaat cgaaaggccgcgggatagactgttctgttctgtggtgacggtcggtgggcagaagtacagctcaactttatgggaaaaat ccaagaagctcgccgaacaagcggcggctattgcctgtttaagaacgctgggccttcctgaaggtaagcggaacgaaagc gccaaccagccctcgctcaacaaacgcaagaggcgagatcagcaactttcaaactgtgaggaacacagagactgttttgt gctcgacgctgtttgcaagaaacctcatcttcttcccaaagaatctctttgcaacagctcctaacgaccgtcctacgctc cgctccgctcgctggcgttttacaactatgcagcttcccatcaccacccacattctctgtcctgtattttgccttggagg caatcaggtggaacagttaaaatacaaaaaccgagggggaaaaaaagaaaagcatcaactacaaacagagcaaggaagta atagtaataaaaaaacgtatgtacaaaatataacaaatgacaattctgtcgttaacgtgaaacctaaaatgtgtccatcc tggttgaatgctgagaagtatatctaaaatcagcataaaatgttaattttatctaaggagagcgggtgaccggactggat ttagaaaccttgcgccattcatttgtccttaacgcttggtcgagaatcccgattttaaataatacggaagtgtgatactt ggaatctgcattgcaaacactgctccttttatggtttgtaagtcacaataaaaaggcatttcccatcctatggt |
|
Protein
| Protein ID | habu1_s499_g02310.t1 |
|---|---|
| Definition | - |
>habu1_s499_g02310.t1 MPMNHIALSFTNKAILAPMVRVGTLPMRLLALDYGADIVYCEELIDIKMLQCKRVVNDILGTVDFVAPNERVVFRTCARE KNHVVFQMGTADAERALAVAKLVEDDIAGIDVNMGCPKEYSTKGGMGAALLSDPDRIESILTALVKGVSKPVTCKIRILS SEEETLRLVKRIEQAGVAAIAVHGRKKEERPQHPVHCDVIKAISEVVSIPVIANGGSYDFIKEYSDLRIFQEATSASSVM VARAAMWNPSIFRKEGSLPLKDIMEEYIKYAVRYDNHFTNTKYCLCQMLREQLENAQGKKLHAAQSLQEICEVFEMSSFF QEASDLLEKKKVSLQVKSPNNDDHPEDTDVIKMAVKFDKREYPPQITPKMHLLEWCRREKLVQPAYETIERPRDRLFCSV VTVGGQKYSSTLWEKSKKLAEQAAAIACLRTLGLPEGKRNESANQPSLNKRKRRDQQLSNCEEHRDCFVLDAVCKKPHLL PKESLCNSS |
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