Gene
| Gene Model ID | habu1_s499_g02311 |
|---|---|
| Locus | habu1_scaffold499 : 621379 ... 685919 : + |
| To GenomeBrowser | habu1_scaffold499:621379..685919 |
| Genes list of scaffold | habu1_scaffold499 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| nuclear factor of activated t- cytoplasmic 3 | GO:0003677 GO:0003700 GO:0005634 GO:0005667 GO:0005737 GO:0006355 GO:0042692 GO:0045449 GO:0071248 GO:0072358 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s499_g02311.t2 | 1 | 1 | RHD | 397 | 556 | 1.1e-25 | 90.2 | 2.7e-27 | 2.0e-23 | 82.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s499_g02311.t2 | gi|543265358|ref|XP_005422854.1| | PREDICTED: nuclear factor of activated T-cells, cytoplasmic 3 [Geospiza fortis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.6 |
| Venom grand-1 | 2.2 |
| Pit, infrared sensing | 3.1 |
| Nose | 3.4 |
| Brain-1 | 2.1 |
| Eye | 5.5 |
| fetal fibroblast | 3.0 |
| venom gland-2 | 3.9 |
| Brain-2 | 2.0 |
| Spleen | 5.9 |
| Lung | 1.6 |
| Liver | 1.6 |
| Kidney | 17.6 |
| Pancreas | 9.1 |
| Small intestine | 2.9 |
| Large intestine | 2.4 |
| Stomach | 4.4 |
| heart | 5.6 |
| ovary | 22.1 |
| cheek muscle | 17.7 |
Transcript
| Transcript ID | habu1_s499_g02311.t1 |
|---|---|
| Definition | - |
>habu1_s499_g02311.t1 ggcccggcttctccagcattaattgcactcaagtgctgtcagccccaatctgcatggcaaatcttgaacctgatgactgt gcatctttatgcattttcagtgtcgaccactcatcctcaataaatcatcccatttgtatcccgtgtcatggatttcaaac acacccttctcctttgtcctcacctgctaaactgcagggtcacaaaagctacgaaggaacatgtgaaataccggaatcta agtacagtccactaggtgggcctaagccttttgaatgtcctagtattcagatcacatctatctctcccaactgtcatcat ggaatagaagccagcgaaagtgaattgcacacaaatggccctcagaatgaatacatggaaaggccttcaagggaccactt gtatcttcctcttgagccatcttacagagagtcatcccttagcccaagtccggccagcagcatttcctctcggagctggt tctcagacgcttcctcttgtgagtcagtctcccatatttacgatgacgtggaatcggaactgaacgaagccgctgctcgg tttacccttgggtcacctttggcatctcctggaggttctccaagaggctgtccagttgatgatccttggcaacaatccta cggatttgggcatgccttgtcgccaagacaatctccttgtcactctcccaggactagtatcacagacgagaattggctca gcccaaggccaacctcaaggccatcctcaaggcctacatcgccgtgtgggaagcgccggcattcgagtgctgaaatctgt tatatcggttccctttctcctcatcattcccccgctccatcaccaggacattctcctcgggggagtgttacggaagatac gtggttgaattcctctctccatggcctcggccctggcctttcagctttccagtgctgcggagataccgatatccctctta aaacaaggaagacctccgaggatcaaaccgcaattatatctgggaaagcagaactttgttctgaagacccgggcaaccta tctccgtccctcgaaactgcaatagatgagagctccgtatcccagcatatgttaaaaaaagatttgtctggtgaccagtt tctttctgtcccgtcacactttacctggaataaaccaaagcctggccatactcctatatttcgcacatcttcattgccgc ctctagactggcctttacccacacaatatgggcaatgtgaactgaaaatagaagtacagccaaaaacccatcacagagca cattatgagacagaaggcagcagaggagcagtaaaagcatctactggtggacatcctgtagtgaagctcctaggttacaa tgaaaaacctgtaaatcttcagatgttcattgggacagcagacgatcggtacttacggccacatgctttctaccaagtgc acagaatcacaggaaaaactgttgccacagctagtcaagaaataatccttgccagcacaaaggttttggaaattcctctt ttacccgaaaacaatatgtcagcctgtattgactgtgcaggtattctgaaactccgcaattcagacatagagcttcggaa gggggagacggatattggcagaaaaaacacaagagtgaggcttgtatttcgtgtccatatcccacagcctagtgggaagg tcttgtcccttcaagttgcctctatacctgttgaatgctctcagagatccgctcaggaacttcctcagatagagaaatac agcatcagtaattgctccgcaaatggaggccatgaaatgattgttacgggctgcaacttccttccagagtcaaaaataat atttctggaaaaggggcaagatggacggccccaatgggaggtggaaggaaaaataattagagataggagtcaagaggctg cgctcattcttgaaattcctccgtatcacaacaaatcaattccagcggccgtccacgtgcagttctatgtttgcaacggc aaaaggaaaaaaagccaggctcagcgtttcacatatactccagttgtattgaaacaagagaacagagatgaaatggattt gacttcggttccatcgttgtccctgactcattgtaaaggactctctcctgtccaaacccagttgccttcacctgacccag ggctctcacacgatagtttactttctgcgtcctccaggaacctcgtaacggcggcatcctctgtggggcctccctaccag tctatgcagcccaacgttgtgtttaatggacaatctggtcttcccatggatcctgcctcttctagtcaaggctacgaggc aatttcctttcagcaagatgcacccgtacctccactgctcaacctcagctgtcagtctctgccaccaatcccatatcctt cttcaagttcaggttcagtgtcaacttctgttgcaacaggaggacatacttcagcacacctagctcactcgagacactcc tcacctcatttgcagcccatgcggtaccattgtcccgatcctcaacacagtcctgtctcttccgcagtgactcagtccct cggacatccttccacacagttgcagcaaatgacttattcttcaaatccagtgacggaaatcatcggaagagacatgccgc agatttctgcgtcccgtggagcaggagctgccgtcgtgcggaaacctggagacaaccaggaagccttgcactttccctct gaataatgctatgtccctctttagatttactgtgcttccgattacgtggccttgatgatcctggacacttctggatcccc tgcagagctgtcctgggagagcgggagagagagtggtaacaggaaacaggttgagttctagatttttaggatgctatata aaaaataaaaagctactttataaaaatggac |
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| Transcript ID | habu1_s499_g02311.t2 |
| Definition | - |
>habu1_s499_g02311.t2 ggcccggcttctccagcattaattgcactcaagtgctgtcagccccaatctgcatggcaaatcttgaacctgatgactgt gcatctttatgcattttcagtgtcgaccactcatcctcaataaatcatcccatttgtatcccgtgtcatggatttcaaac acacccttctcctttgtcctcacctgctaaactgcagggtcacaaaagctacgaaggaacatgtgaaataccggaatcta agtacagtccactaggtgggcctaagccttttgaatgtcctagtattcagatcacatctatctctcccaactgtcatcat ggaatagaagccagcgaaagtgaattgcacacaaatggccctcagaatgaatacatggaaaggccttcaagggaccactt gtatcttcctcttgagccatcttacagagagtcatcccttagcccaagtccggccagcagcatttcctctcggagctggt tctcagacgcttcctcttgtgagtcagtctcccatatttacgatgacgtggaatcggaactgaacgaagccgctgctcgg tttacccttgggtcacctttggcatctcctggaggttctccaagaggctgtccagttgatgatccttggcaacaatccta cggatttgggcatgccttgtcgccaagacaatctccttgtcactctcccaggactagtatcacagacgagaattggctca gcccaaggccaacctcaaggccatcctcaaggcctacatcgccgtgtgggaagcgccggcattcgagtgctgaaatctgt tatatcggttccctttctcctcatcattcccccgctccatcaccaggacattctcctcgggggagtgttacggaagatac gtggttgaattcctctctccatggcctcggccctggcctttcagctttccagtgctgcggagataccgatatccctctta aaacaaggaagacctccgaggatcaaaccgcaattatatctgggaaagcagaactttgttctgaagacccgggcaaccta tctccgtccctcgaaactgcaatagatgagagctccgtatcccagcatatgttaaaaaaagatttgtctggtgaccagtt tctttctgtcccgtcacactttacctggaataaaccaaagcctggccatactcctatatttcgcacatcttcattgccgc ctctagactggcctttacccacacaatatgggcaatgtgaactgaaaatagaagtacagccaaaaacccatcacagagca cattatgagacagaaggcagcagaggagcagtaaaagcatctactggtggacatcctgtagtgaagctcctaggttacaa tgaaaaacctgtaaatcttcagatgttcattgggacagcagacgatcggtacttacggccacatgctttctaccaagtgc acagaatcacaggaaaaactgttgccacagctagtcaagaaataatccttgccagcacaaaggttttggaaattcctctt ttacccgaaaacaatatgtcagcctgtattgactgtgcaggtattctgaaactccgcaattcagacatagagcttcggaa gggggagacggatattggcagaaaaaacacaagagtgaggcttgtatttcgtgtccatatcccacagcctagtgggaagg tcttgtcccttcaagttgcctctatacctgttgaatgctctcagagatccgctcaggaacttcctcagatagagaaatac agcatcagtaattgctccgcaaatggaggccatgaaatgattgttacgggctgcaacttccttccagagtcaaaaataat atttctggaaaaggggcaagatggacggccccaatgggaggtggaaggaaaaataattagagataggagtcaagaggctg cgctcattcttgaaattcctccgtatcacaacaaatcaattccagcggccgtccacgtgcagttctatgtttgcaacggc aaaaggaaaaaaagccaggctcagcgtttcacatatactccagttgtattgaaacaagagaacagagatgaaatggattt gacttcggttccatcgttgtccctgactcattgtaaaggactctctcctgtccaaacccagttgccttcacctgacccag ggctctcacacgatagtttactttctgcgtcctccaggaacctcgtaacggcggcatcctctgtggggcctccctaccag tctatgcagcccaacgttgtgtttaatggacaatctggtcttcccatggatcctgcctcttctagtcaaggctacgaggc aatttcctttcagcaagatgcacccgtacctccactgctcaacctcagctgtcagtctctgccaccaatcccatatcctt cttcaagttcaggttcagtgtcaacttctgttgcaacaggaggacatacttcagcacacctagctcactcgagacactcc tcacctcatttgcagcccatgcggtaccattgtcccgatcctcaacacagtcctgtctcttccgcagtgactcagtccct cggacatccttccacacagttgcagcaaatgacttattcttcaaatccagaagggtcagccgttcatgttaagcctgaac cagaagatcaagagttaaattttcagacaatgggattgcaagacatcacgttagatgatgtgacggaaatcatcggaaga gacatgccgcagatttctgcgtcccgtggagcaggagctgccgtcgtgcggaaacctggagacaaccaggaagccttgca ctttccctctgaataatgctatgtccctctttagatttactgtgcttccgattacgtggccttgatgatcctggacactt ctggatcccctgcagagctgtcctgggagagcgggagagagagtggtaacaggaaacaggttgagttctagatttttagg atgctatataaaaaataaaaagctactttataaaaatggac |
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Protein
| Protein ID | habu1_s499_g02311.t1 |
|---|---|
| Definition | - |
>habu1_s499_g02311.t1 MANLEPDDCASLCIFSVDHSSSINHPICIPCHGFQTHPSPLSSPAKLQGHKSYEGTCEIPESKYSPLGGPKPFECPSIQI TSISPNCHHGIEASESELHTNGPQNEYMERPSRDHLYLPLEPSYRESSLSPSPASSISSRSWFSDASSCESVSHIYDDVE SELNEAAARFTLGSPLASPGGSPRGCPVDDPWQQSYGFGHALSPRQSPCHSPRTSITDENWLSPRPTSRPSSRPTSPCGK RRHSSAEICYIGSLSPHHSPAPSPGHSPRGSVTEDTWLNSSLHGLGPGLSAFQCCGDTDIPLKTRKTSEDQTAIISGKAE LCSEDPGNLSPSLETAIDESSVSQHMLKKDLSGDQFLSVPSHFTWNKPKPGHTPIFRTSSLPPLDWPLPTQYGQCELKIE VQPKTHHRAHYETEGSRGAVKASTGGHPVVKLLGYNEKPVNLQMFIGTADDRYLRPHAFYQVHRITGKTVATASQEIILA STKVLEIPLLPENNMSACIDCAGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHIPQPSGKVLSLQVASIPVECSQRSA QELPQIEKYSISNCSANGGHEMIVTGCNFLPESKIIFLEKGQDGRPQWEVEGKIIRDRSQEAALILEIPPYHNKSIPAAV HVQFYVCNGKRKKSQAQRFTYTPVVLKQENRDEMDLTSVPSLSLTHCKGLSPVQTQLPSPDPGLSHDSLLSASSRNLVTA ASSVGPPYQSMQPNVVFNGQSGLPMDPASSSQGYEAISFQQDAPVPPLLNLSCQSLPPIPYPSSSSGSVSTSVATGGHTS AHLAHSRHSSPHLQPMRYHCPDPQHSPVSSAVTQSLGHPSTQLQQMTYSSNPVTEIIGRDMPQISASRGAGAAVVRKPGD NQEALHFPSE |
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| Protein ID | habu1_s499_g02311.t2 |
| Definition | - |
>habu1_s499_g02311.t2 MANLEPDDCASLCIFSVDHSSSINHPICIPCHGFQTHPSPLSSPAKLQGHKSYEGTCEIPESKYSPLGGPKPFECPSIQI TSISPNCHHGIEASESELHTNGPQNEYMERPSRDHLYLPLEPSYRESSLSPSPASSISSRSWFSDASSCESVSHIYDDVE SELNEAAARFTLGSPLASPGGSPRGCPVDDPWQQSYGFGHALSPRQSPCHSPRTSITDENWLSPRPTSRPSSRPTSPCGK RRHSSAEICYIGSLSPHHSPAPSPGHSPRGSVTEDTWLNSSLHGLGPGLSAFQCCGDTDIPLKTRKTSEDQTAIISGKAE LCSEDPGNLSPSLETAIDESSVSQHMLKKDLSGDQFLSVPSHFTWNKPKPGHTPIFRTSSLPPLDWPLPTQYGQCELKIE VQPKTHHRAHYETEGSRGAVKASTGGHPVVKLLGYNEKPVNLQMFIGTADDRYLRPHAFYQVHRITGKTVATASQEIILA STKVLEIPLLPENNMSACIDCAGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHIPQPSGKVLSLQVASIPVECSQRSA QELPQIEKYSISNCSANGGHEMIVTGCNFLPESKIIFLEKGQDGRPQWEVEGKIIRDRSQEAALILEIPPYHNKSIPAAV HVQFYVCNGKRKKSQAQRFTYTPVVLKQENRDEMDLTSVPSLSLTHCKGLSPVQTQLPSPDPGLSHDSLLSASSRNLVTA ASSVGPPYQSMQPNVVFNGQSGLPMDPASSSQGYEAISFQQDAPVPPLLNLSCQSLPPIPYPSSSSGSVSTSVATGGHTS AHLAHSRHSSPHLQPMRYHCPDPQHSPVSSAVTQSLGHPSTQLQQMTYSSNPEGSAVHVKPEPEDQELNFQTMGLQDITL DDVTEIIGRDMPQISASRGAGAAVVRKPGDNQEALHFPSE |
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