Gene
| Gene Model ID | habu1_s499_g02313 |
|---|---|
| Locus | habu1_scaffold499 : 754333 ... 755808 : - |
| To GenomeBrowser | habu1_scaffold499:754333..755808 |
| Genes list of scaffold | habu1_scaffold499 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| leukotriene b4 receptor 1-like | GO:0004930 GO:0007186 GO:0016021 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s499_g02313.t1 | 1 | 1 | 7TM_GPCR_Srsx | 16 | 232 | 2.5e-07 | 30.1 | 1.1e-10 | 3.2e-07 | 29.7 |
| habu1_s499_g02313.t1 | 1 | 1 | 7tm_1 | 22 | 273 | 8.40779e-45 | 152.9 | 0.0 | 1.12104e-44 | 152.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s499_g02313.t1 | gi|602677605|ref|XP_007444248.1| | PREDICTED: leukotriene B4 receptor 1-like [Python bivittatus] | 0.0 |
| habu1_s499_g02313.t1 | gi|327276469|ref|XP_003222992.1| | PREDICTED: leukotriene B4 receptor 1-like [Anolis carolinensis] | 0.0 |
| habu1_s499_g02313.t1 | gi|514772011|ref|XP_005025770.1| | PREDICTED: leukotriene B4 receptor 1-like [Anas platyrhynchos] | 0.0 |
| habu1_s499_g02313.t1 | gi|694645785|ref|XP_009480334.1| | PREDICTED: leukotriene B4 receptor 1-like [Pelecanus crispus] | 0.0 |
| habu1_s499_g02313.t1 | gi|719773457|ref|XP_010219988.1| | PREDICTED: C3a anaphylatoxin chemotactic receptor-like [Tinamus guttatus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.5 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.2 |
| Nose | 0.5 |
| Brain-1 | 0.4 |
| Eye | 0.2 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.6 |
| Spleen | 1.6 |
| Lung | 0.6 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.3 |
| Small intestine | 0.2 |
| Large intestine | 0.4 |
| Stomach | 0.2 |
| heart | 0.1 |
| ovary | 0.1 |
| cheek muscle | 0.1 |
Transcript
| Transcript ID | habu1_s499_g02313.t1 |
|---|---|
| Definition | - |
>habu1_s499_g02313.t1 acccttgaataacaactggataaagccagtctgtgggctagatcaaaatgactccacctacagaaattgaagatcacctg ccaatgtcagtggcaaagattttcgtctgtctgatcctgagtttttcctttgtccttggaatccctggaaattctttggt catctggaccatttgtggacgaatgaagaagaagcctccaaccgttgtgctcatcctacaactggccgtggctgatctcc tgattcttctgaccctgccaatctggatctattcttttgccaaccagtggctctttgggatcggcgcctgcaaaggtctg gtgtttgtcatttactgtagcttgtatgccagcatcttcttcatcatgtgtctcagtcttgagcggttcctggctgtcgt tcatccctttgctcttcaacgatggaagaagacgatggtcgtccacctggtggtggtcatgatctggttcttctccatcg tccttggatcagctatcatcccatttcaggccatcggtgacattgcaggggacctgcagtgtgccactcgtgagtatgca actgaatcacaaaaggttatccacctcttgtctgaaactattttgggcttcatagttcccttcaccgtcatctgtacctg ctacgtctacgtgggcaaaagaattggggccatggcttgtccatcaaaacgacgctccgccaaattgattacctccgtag tagtgattttttgtctgtgttggttcccccaccatttcttcaacctcataacagtcatctcagttctgctgcaagactca aattcagagaccgctcaaaccttggagaagatttcagaggcaggagcgtggattgcgggcgcagttatttttattagcag ttgcatcaacccgctcctctacgcttttgctgctaggaacattcaaagcagtgccaggtttacaaagttgtccaaactct tcgaacaagtggccccttcggagaggcaggggtccaacctggaaacaccttctccagatgaaaaagaggaaagtttgaca agcacagagattgtctagtgccagtgccgggaaaagtgtcctcagcctatagcgaggacttttcctaaaatttaaacacc gttcttggctttcgatgagtttttatcaagcatctaaatcctattcagatttgttaatatgaaaactgccacatttctct tgattttttttttctagactgggttctatatttgtgtgctacttgggtgtagaattcagtgcagttttgcgcagtacaca gctccaaatatctgctaggttttagatcttcaaaaaggagggaccgaaccacgcactccaaaagtgatgggtgtcacaac tgtatgaagccattggtgaataacgtaatgcaattaaatgcactctggttttgccgctccactcttggactgtgatcctg cttagacgaataaaaataggattgtctttaaagatt |
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Protein
| Protein ID | habu1_s499_g02313.t1 |
|---|---|
| Definition | - |
>habu1_s499_g02313.t1 MSVAKIFVCLILSFSFVLGIPGNSLVIWTICGRMKKKPPTVVLILQLAVADLLILLTLPIWIYSFANQWLFGIGACKGLV FVIYCSLYASIFFIMCLSLERFLAVVHPFALQRWKKTMVVHLVVVMIWFFSIVLGSAIIPFQAIGDIAGDLQCATREYAT ESQKVIHLLSETILGFIVPFTVICTCYVYVGKRIGAMACPSKRRSAKLITSVVVIFCLCWFPHHFFNLITVISVLLQDSN SETAQTLEKISEAGAWIAGAVIFISSCINPLLYAFAARNIQSSARFTKLSKLFEQVAPSERQGSNLETPSPDEKEESLTS TEIV |
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