Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s499_g02318
Locus habu1_scaffold499 : 963882 ... 969598 : +
To GenomeBrowser habu1_scaffold499:963882..969598
Genes list of scaffold habu1_scaffold499

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s499_g02318.t1 gi|602645596|ref|XP_007429236.1| PREDICTED: probable RNA polymerase II nuclear localization protein SLC7A6OS [Python bivittatus] 0.0
habu1_s499_g02318.t1 gi|637317339|ref|XP_003222994.2| PREDICTED: probable RNA polymerase II nuclear localization protein SLC7A6OS [Anolis carolinensis] 0.0
habu1_s499_g02318.t1 gi|530639120|ref|XP_005306356.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA polymerase II nuclear localization protein SLC7A6OS [Chrysemys picta bellii] 0.0
habu1_s499_g02318.t1 gi|704234827|ref|XP_010158597.1| PREDICTED: probable RNA polymerase II nuclear localization protein SLC7A6OS [Eurypyga helias] 0.0
habu1_s499_g02318.t1 gi|729724790|ref|XP_010582985.1| PREDICTED: probable RNA polymerase II nuclear localization protein SLC7A6OS isoform X2 [Haliaeetus leucocephalus] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 6.5
Venom grand-1 9.6
Pit, infrared sensing 8.0
Nose 7.7
Brain-1 6.9
Eye 8.9
fetal fibroblast 13.9
venom gland-2 7.5
Brain-2 6.4
Spleen 5.2
Lung 6.6
Liver 9.9
Kidney 8.1
Pancreas 6.6
Small intestine 3.0
Large intestine 3.9
Stomach 4.6
heart 9.2
ovary 29.6
cheek muscle 15.3

Transcript
Transcript IDhabu1_s499_g02318.t1
Definition-
>habu1_s499_g02318.t1
ggggaaagttcccattgtcccttgcgcgtagagcggcctggtctggttgccatggagaccggcgccgtgctgcgcgtgaa
gagaaagcgcggaggccctttgccggccgaagcgctggtccttgcctgcaaacgcttccgccttgaggctggggccgccg
ccgaggcctcctcctccgccgccgccgcctcttcgcccggagaaggtgaggtggagaagacgctcttcaagttggtagcc
accgtaaactcggaggccgaacctgttgacaaatacatacgggaagcttttacccaacagaaaggaggccagatcctgcg
acctgctctagggagtgctaaaagaataatccaggatcttcgttcttcaaagcaagccaaaaggcaggaaagccgatacc
gcctaatcactagcctgcgtccaaatctcagtgatggggaaaatgctgttctcggagcaaatgagaaagaatccgatgaa
aagaaaccatcttccatatctgagaaagacaaaaacgacggcagctcaggttttcagttctttgatattatacaggagga
ggatgtggaaaatgatacacctgctgcccatttacagaaaccacatccggatgtgatcctttgcaatgctgtagagatga
ttcgtgaacgtttaacagtatctgacaacactaaagaggcagagggttgcttaaatcaagaagagtatgtctatgatatc
tactgtacggaaacagctactccagggtggatcgagaacattctctccgtacaaccttacactcaagagtttgacttggg
ggatgaagagcagttccccgaggagatctatgaagatgaagatgatgagaataatgagaacaactggcgtaacgactacc
cagatgaaaatgaattccttgatgaagatgaagaatccgaaaaaaacagcggggataccagtgatgaagattgtggacat
atcaggcgatcgtgggagaagtatgaatctgaagtcctgcgggagtgtgaatatgacggaataaaggaactggattctga
gtagcttgcaggatctttcctattcacgagaccccgtgttgtgatgcggccgtaacaaattgcggcaccgcaaccctcac
ttgtcatgctgttttggccagagcatcttcaaatcgagagaaagcggattgcctttagcgtacaaagtcttcgaaaatga
agtgatgcaaatgatattggcagtttttggatctcagccgtggcattgtacaagtaaagcctgacattaaaagacagatt
tgccattggggga

Protein
Protein IDhabu1_s499_g02318.t1
Definition-
>habu1_s499_g02318.t1
METGAVLRVKRKRGGPLPAEALVLACKRFRLEAGAAAEASSSAAAASSPGEGEVEKTLFKLVATVNSEAEPVDKYIREAF
TQQKGGQILRPALGSAKRIIQDLRSSKQAKRQESRYRLITSLRPNLSDGENAVLGANEKESDEKKPSSISEKDKNDGSSG
FQFFDIIQEEDVENDTPAAHLQKPHPDVILCNAVEMIRERLTVSDNTKEAEGCLNQEEYVYDIYCTETATPGWIENILSV
QPYTQEFDLGDEEQFPEEIYEDEDDENNENNWRNDYPDENEFLDEDEESEKNSGDTSDEDCGHIRRSWEKYESEVLRECE
YDGIKELDSE

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