Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s499_g02320
Locus habu1_scaffold499 : 1074503 ... 1090891 : -
To GenomeBrowser habu1_scaffold499:1074503..1090891
Genes list of scaffold habu1_scaffold499

Annotation by Blast2GO
Annotation GO
solute carrier family 12 member 3 GO:0006812 GO:0015377 GO:0016021 GO:1902476

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s499_g02320.t3 1 1 AA_permease_N 59 110 4.3e-18 64.4 1.1e-21 8.3e-18 63.4
habu1_s499_g02320.t3 1 1 AA_permease 180 685 0.0 453.6 0.0 0.0 453.2

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.0
Venom grand-1 0.1
Pit, infrared sensing 0.0
Nose 0.1
Brain-1 0.2
Eye 0.1
fetal fibroblast 0.0
venom gland-2 0.2
Brain-2 0.5
Spleen 0.0
Lung 0.0
Liver 0.1
Kidney 0.2
Pancreas 0.0
Small intestine 0.1
Large intestine 0.0
Stomach 0.0
heart 0.1
ovary 0.1
cheek muscle 0.0

Transcript
Transcript IDhabu1_s499_g02320.t1
Definition-
>habu1_s499_g02320.t1
caactgtcttgcttagcaggaaatttggggctcgcctgtgaacaaataagagtttagggaaggtcagaggcacattctca
taaaatagttctcataaaataatccacgaagcggtgccccagttcctgcccatatattgtctgacctaattaggaaataa
gggaagcttaatgtccccgaacaaaatgaatcacagcggaagccttgtttcagccttcggtttttttcgtccgctttttt
ccttaggacttaataccaaatctgttatcaccgtcctgatctagaactggaattggttataaaaagcccacatgtctgac
ccacggcgttacagaccccaatctgcacacactcccctgggatctgtgatttcaggggggagtcaagatgaagaggggag
ggcatgagatggtggagctgccagggaccgaaggagaagaccacggctgtctgaatggccgcttcaccattagcaccctg
atcggccctgagggcactggtgccaaccactacagcccaacgggtgctgctccctacgacatcacccaaagcagccactg
tacccataacagcaccttctacatgcagacctttggctataacaccgttgatgttgtgcccaactatgaaaactatgcca
acaccaagatctctagtgaaattaagaagccaagaccaacacttgcagatctgcactcctttcttaagcaagaaaatagc
caccggtacccaccgagatacgaagcccacagaagcaacagcttctcagaaggagcggcggaagaagaggctgctaagga
gaaagagaagaatcaaggagagcccgtccgatttgggtgggtcaaaggggtgatgattcgttgcatgcttaacatctggg
gtgtgatcctgtatctccggctcccttggatcactgcgcaagcaggcatcgcactgacttgggtgatcattctaatgtct
gtgaccgtgaccaccatcacaggattatccatttctgccatctccaccaatggcaaagtcaaatcaggggggacttactt
cctcatttcgagaagccttgggccagagttgggtggctccatcggtctcatcttcgcttttgccaatgccgtggccgtgg
ccatgcataccgtgggctttgcagaaacagtgcgagaccttttgcaggaatatcactcaagcatggtggaccctaccaat
gatatccgcatcattggggttgtcactgtgacagtactgcttggagtatccttggcggggatggagtgggaagccaaggc
tcaagttctctttttcgtggtgatcatgatttcgttcatcaactacctggtggggacagttattccacccagtgaggaga
agcaggccaaaggatttttcagctaccgagccaacatttttgctcagaactttgttcccaattggcgagggcctgatggc
agcttttttggtttgttttccatcttcttcccatcagccactggcatcttggcaggagcgaacatttcaggtgacttgaa
ggatcctgctgtggcaattcctaaaggaaccctcgtggctattttttggacaacggtgtcatatctggttctttcagcta
caattggttcgtgtgttgtccgtgatgcctctggaagcattaatgatactgtcctcactggttccatgggttgtgaaggc
attgcttgtggctacggatggaacttcacagagtgtacacagacccatagctgtcaacatggactcatcaattattatca
gaccatgagcatggtttctggcttcgcccctctcatcacagctggaatttttggggccaccctctcttcggctttggcat
gcctcgtctcagcccccaaagtcttccagtgtctttgtaaggatgaactctacccggccattggcttttttggaaagggc
tatggaaaaaataacgaacccatcaggggttacctgctgacgtacctcatcgcggtgggcttcattctgattgcggaact
gaatgccatcgctcccatcatttccaacttctttctgtgctcctatgcgctcatcaatttcagctgtttccatgcctcca
ttaccaactcaccaggttggagaccctccttcaagtattatagcaagtgggcagccctgtttggggccatcgtttctgtc
gttatcatgttcctcctaacctggtgggctgccctcattgccattgggattgtggtgttcttgctcggatacgttctcta
caagaagcctggtgtaaactgggggtcctctgttcaagctggttcttataacatggccctaaattattctgtgagtctta
atgaggtggatgaccacattaaaaattacaggcctcaatgcctcgtcctgactggtcctcctaatttccgcccagcactg
gtcgattttgtaggcacttttacaaaaaaattgagtttgatgatctgcgggaatgtgttgatcgggccctgcagaccggc
aaatgctgaagtgggacttgcttccaaaggccacatcaagtggctgatcaagagaaaaatcaaggctttctacacaggca
tctcagcagaggacctgagaactggagcacaagtccttatgcaggcttcaggtcttggcagaatgaaacccaacattctt
gtgcttggatataagaagaactggcaggcagcacatccccagacagtggaagaatatatcggaatcctgcacgatgcttt
tgacttcaaatacggagtgtgcgtaatgcgtgtgaaggagggactcaatatttctcggatcatgcaggctcacatcgtat
gggggcagaaatcctgctgggcacgaaaggagatgttctcaaccagattgatcaccctggcccttgggggaaaacctgac
actaagccatcatgtgttaatccagtttttgatccagcagatattcctcagaagaacagtgaagtacctgccgtaatgga
cacatgtcagttctaagaagcttcttaaccgggttactgacccaaatctattttctgggtttctgcattcgctttgatat
attcacatgggaattagggagggggggaaattagagcaggagaaatgcccccggggccatctgtgttcactcctgctgac
cgactcctgggaaaacggtcgcttatcaccttttcgattcaaagttctcataacatcttcgcgctggtggttggttcctg
atggactggggcactggggcagggctgacaaaacaggacttttagctcggtgcttttgggttgggagcttcagattctgc
cttttgactctgcaatcacttcctctcagtaaaagatcctctttgaaacagtgct
Transcript IDhabu1_s499_g02320.t2
Definition-
>habu1_s499_g02320.t2
caactgtcttgcttagcaggaaatttggggctcgcctgtgaacaaataagagtttagggaaggtcagaggcacattctca
taaaatagttctcataaaataatccacgaagcggtgccccagttcctgcccatatattgtctgacctaattaggaaataa
gggaagcttaatgtccccgaacaaaatgaatcacagcggaagccttgtttcagccttcggtttttttcgtccgctttttt
ccttaggacttaataccaaatctgttatcaccgtcctgatctagaactggaattggttataaaaagcccacatgtctgac
ccacggcgttacagaccccaatctgcacacactcccctgggatctgtgatttcaggggggagtcaagatgaagaggggag
ggcatgagatggtggagctgccagggaccgaaggagaagaccacggctgtctgaatggccgcttcaccattagcaccctg
atcggccctgagggcactggtgccaaccactacagcccaacgggtgctgctccctacgacatcacccaaagcagccactg
tacccataacagcaccttctacatgcagacctttggctataacaccgttgatgttgtgcccaactatgaaaactatgcca
acaccaagatctctagtgaaattaagaagccaagaccaacacttgcagatctgcactcctttcttaagagtgaagtcctc
caaggcagaaacatcgagatcattatcctatcattcctgatgtgtggcaccctcacattctccaaacaagaaaatagcca
ccggtacccaccgagatacgaagcccacagaagcaacagcttctcagaaggagcggcggaagaagaggctgctaaggaga
aagagaagaatcaaggagagcccgtccgatttgggtgggtcaaaggggtgatgattcgttgcatgcttaacatctggggt
gtgatcctgtatctccggctcccttggatcactgcgcaagcaggcatcgcactgacttgggtgatcattctaatgtctgt
gaccgtgaccaccatcacaggattatccatttctgccatctccaccaatggcaaagtcaaatcaggggggacttacttcc
tcatttcgagaagccttgggccagagttgggtggctccatcggtctcatcttcgcttttgccaatgccgtggccgtggcc
atgcataccgtgggctttgcagaaacagtgcgagaccttttgcaggaatatcactcaagcatggtggaccctaccaatga
tatccgcatcattggggttgtcactgtgacagtactgcttggagtatccttggcggggatggagtgggaagccaaggctc
aagttctctttttcgtggtgatcatgatttcgttcatcaactacctggtggggacagttattccacccagtgaggagaag
caggccaaaggatttttcagctaccgagccaacatttttgctcagaactttgttcccaattggcgagggcctgatggcag
cttttttggtttgttttccatcttcttcccatcagccactggcatcttggcaggagcgaacatttcaggtgacttgaagg
atcctgctgtggcaattcctaaaggaaccctcgtggctattttttggacaacggtgtcatatctggttctttcagctaca
attggttcgtgtgttgtccgtgatgcctctggaagcattaatgatactgtcctcactggttccatgggttgtgaaggcat
tgcttgtggctacggatggaacttcacagagtgtacacagacccatagctgtcaacatggactcatcaattattatcaga
ccatgagcatggtttctggcttcgcccctctcatcacagctggaatttttggggccaccctctcttcggctttggcatgc
ctcgtctcagcccccaaagtcttccagtgtctttgtaaggatgaactctacccggccattggcttttttggaaagggcta
tggaaaaaataacgaacccatcaggggttacctgctgacgtacctcatcgcggtgggcttcattctgattgcggaactga
atgccatcgctcccatcatttccaacttctttctgtgctcctatgcgctcatcaatttcagctgtttccatgcctccatt
accaactcaccaggttggagaccctccttcaagtattatagcaagtgggcagccctgtttggggccatcgtttctgtcgt
tatcatgttcctcctaacctggtgggctgccctcattgccattgggattgtggtgttcttgctcggatacgttctctaca
agaagcctggtgtaaactgggggtcctctgttcaagctggttcttataacatggccctaaattattctgtgagtcttaat
gaggtggatgaccacattaaaaattacaggcctcaatgcctcgtcctgactggtcctcctaatttccgcccagcactggt
cgattttgtaggcacttttacaaaaaaattgagtttgatgatctgcgggaatgtgttgatcgggccctgcagaccggcaa
atgctgaagtgggacttgcttccaaaggccacatcaagtggctgatcaagagaaaaatcaaggctttctacacaggcatc
tcagcagaggacctgagaactggagcacaagtccttatgcaggcttcaggtcttggcagaatgaaacccaacattcttgt
gcttggatataagaagaactggcaggcagcacatccccagacagtggaagaatatatcggaatcctgcacgatgcttttg
acttcaaatacggagtgtgcgtaatgcgtgtgaaggagggactcaatatttctcggatcatgcaggctcacatcgtatgg
gggcagaaatcctgctgggcacgaaaggagatgttctcaaccagattgatcaccctggcccttgggggaaaacctgacac
taagccatcatgtgttaatccagtttttgatccagcagatattcctcagaagaacagtgaagtacctgccgtaatggaca
catgtcagttctaagaagcttcttaaccgggttactgacccaaatctattttctgggtttctgcattcgctttgatatat
tcacatgggaattagggagggggggaaattagagcaggagaaatgcccccggggccatctgtgttcactcctgctgaccg
actcctgggaaaacggtcgcttatcaccttttcgattcaaagttctcataacatcttcgcgctggtggttggttcctgat
ggactggggcactggggcagggctgacaaaacaggacttttagctcggtgcttttgggttgggagcttcagattctgcct
tttgactctgcaatcacttcctctcagtaaaagatcctctttgaaacagtgct
Transcript IDhabu1_s499_g02320.t3
Definition-
>habu1_s499_g02320.t3
caactgtcttgcttagcaggaaatttggggctcgcctgtgaacaaataagagtttagggaaggtcagaggcacattctca
taaaatagttctcataaaataatccacgaagcggtgccccagttcctgcccatatattgtctgacctaattaggaaataa
gggaagcttaatgtccccgaacaaaatgaatcacagcggaagccttgtttcagccttcggtttttttcgtccgctttttt
ccttaggacttaataccaaatctgttatcaccgtcctgatctagaactggaattggttataaaaagcccacatgtctgac
ccacggcgttacagaccccaatctgcacacactcccctgggatctgtgatttcaggggggagtcaagatgaagaggggag
ggcatgagatggtggagctgccagggaccgaaggagaagaccacggctgtctgaatggccgcttcaccattagcaccctg
atcggccctgagggcactggtgccaaccactacagcccaacgggtgctgctccctacgacatcacccaaagcagccactg
tacccataacagcaccttctacatgcagacctttggctataacaccgttgatgttgtgcccaactatgaaaactatgcca
acaccaagatctctagtgaaattaagaagccaagaccaacacttgcagatctgcactcctttcttaagagtgaagtcctc
caaggcagaaacatcgagatcattatcctatcattcctgatgtgtggcaccctcacattctccaaacaagaaaatagcca
ccggtacccaccgagatacgaagcccacagaagcaacagcttctcagaaggagcggcggaagaagaggctgctaaggaga
aagagaagaatcaaggagagcccgtccgatttgggtgggtcaaaggggtgatgattcgttgcatgcttaacatctggggt
gtgatcctgtatctccggctcccttggatcactgcgcaagcaggcatcgcactgacttgggtgatcattctaatgtctgt
gaccgtgaccaccatcacaggattatccatttctgccatctccaccaatggcaaagtcaaatcaggggggacttacttcc
tcatttcgagaagccttgggccagagttgggtggctccatcggtctcatcttcgcttttgccaatgccgtggccgtggcc
atgcataccgtgggctttgcagaaacagtgcgagaccttttgcaggaatatcactcaagcatggtggaccctaccaatga
tatccgcatcattggggttgtcactgtgacagtactgcttggagtatccttggcggggatggagtgggaagccaaggctc
aagttctctttttcgtggtgatcatgatttcgttcatcaactacctggtggggacagttattccacccagtgaggagaag
caggccaaaggatttttcagctaccgagccaacatttttgctcagaactttgttcccaattggcgagggcctgatggcag
cttttttggtttgttttccatcttcttcccatcagccactggcatcttggcaggagcgaacatttcaggtgacttgaagg
atcctgctgtggcaattcctaaaggaaccctcgtggctattttttggacaacggtgtcatatctggttctttcagctaca
attggttcgtgtgttgtccgtgatgcctctggaagcattaatgatactgtcctcactggttccatgggttgtgaaggcat
tgcttgtggctacggatggaacttcacagagtgtacacagacccatagctgtcaacatggactcatcaattattatcaga
ccatgagcatggtttctggcttcgcccctctcatcacagctggaatttttggggccaccctctcttcggctttggcatgc
ctcgtctcagcccccaaagtcttccagtgtctttgtaaggatgaactctacccggccattggcttttttggaaagggcta
tggaaaaaataacgaacccatcaggggttacctgctgacgtacctcatcgcggtgggcttcattctgattgcggaactga
atgccatcgctcccatcatttccaacttctttctgtgctcctatgcgctcatcaatttcagctgtttccatgcctccatt
accaactcaccaggttggagaccctccttcaagtattatagcaagtgggcagccctgtttggggccatcgtttctgtcgt
tatcatgttcctcctaacctggtgggctgccctcattgccattgggattgtggtgttcttgctcggatacgttctctaca
agaagcctggtgtaaactgggggtcctctgttcaagctggttcttataacatggccctaaattattctgtgagtcttaat
gaggtggatgaccacattaaaaattacaggcctcaatgcctcgtcctgactggtcctcctaatttccgcccagcactggt
cgattttgtaggcacttttacaaaaaaattgagtttgatgatctgcgggaatgtgttgatcgggccctgcagaccggcaa
atgctgaagtgggacttgcttccaaaggccacatcaagtggctgatcaagagaaaaatcaaggctttctacacaggcatc
tcagcagaggacctgagaactggagcacaagtccttatgcaggcttcaggtcttggcagaatgaaacccaacattcttgt
gcttggatataagaagaactggcaggcagcacatccccagacagtggaagaatatatcggaatcctgcacgatgcttttg
acttcaaatacggagtgtgcgtaatgcgtgtgaaggagggactcaatatttctcggatcatgcaggctcacattaatcca
gtttttgatccagcagatattcctcagaagaacagtgaagtacctgccgtaatggacacatgtcagttctaagaagcttc
ttaaccgggttactgacccaaatctattttctgggtttctgcattcgctttgatatattcacatgggaattagggagggg
gggaaattagagcaggagaaatgcccccggggccatctgtgttcactcctgctgaccgactcctgggaaaacggtcgctt
atcaccttttcgattcaaagttctcataacatcttcgcgctggtggttggttcctgatggactggggcactggggcaggg
ctgacaaaacaggacttttagctcggtgcttttgggttgggagcttcagattctgccttttgactctgcaatcacttcct
ctcagtaaaagatcctctttgaaacagtgct

Protein
Protein IDhabu1_s499_g02320.t1
Definition-
>habu1_s499_g02320.t1
MKRGGHEMVELPGTEGEDHGCLNGRFTISTLIGPEGTGANHYSPTGAAPYDITQSSHCTHNSTFYMQTFGYNTVDVVPNY
ENYANTKISSEIKKPRPTLADLHSFLKQENSHRYPPRYEAHRSNSFSEGAAEEEAAKEKEKNQGEPVRFGWVKGVMIRCM
LNIWGVILYLRLPWITAQAGIALTWVIILMSVTVTTITGLSISAISTNGKVKSGGTYFLISRSLGPELGGSIGLIFAFAN
AVAVAMHTVGFAETVRDLLQEYHSSMVDPTNDIRIIGVVTVTVLLGVSLAGMEWEAKAQVLFFVVIMISFINYLVGTVIP
PSEEKQAKGFFSYRANIFAQNFVPNWRGPDGSFFGLFSIFFPSATGILAGANISGDLKDPAVAIPKGTLVAIFWTTVSYL
VLSATIGSCVVRDASGSINDTVLTGSMGCEGIACGYGWNFTECTQTHSCQHGLINYYQTMSMVSGFAPLITAGIFGATLS
SALACLVSAPKVFQCLCKDELYPAIGFFGKGYGKNNEPIRGYLLTYLIAVGFILIAELNAIAPIISNFFLCSYALINFSC
FHASITNSPGWRPSFKYYSKWAALFGAIVSVVIMFLLTWWAALIAIGIVVFLLGYVLYKKPGVNWGSSVQAGSYNMALNY
SVSLNEVDDHIKNYRPQCLVLTGPPNFRPALVDFVGTFTKKLSLMICGNVLIGPCRPANAEVGLASKGHIKWLIKRKIKA
FYTGISAEDLRTGAQVLMQASGLGRMKPNILVLGYKKNWQAAHPQTVEEYIGILHDAFDFKYGVCVMRVKEGLNISRIMQ
AHIVWGQKSCWARKEMFSTRLITLALGGKPDTKPSCVNPVFDPADIPQKNSEVPAVMDTCQF
Protein IDhabu1_s499_g02320.t2
Definition-
>habu1_s499_g02320.t2
MKRGGHEMVELPGTEGEDHGCLNGRFTISTLIGPEGTGANHYSPTGAAPYDITQSSHCTHNSTFYMQTFGYNTVDVVPNY
ENYANTKISSEIKKPRPTLADLHSFLKSEVLQGRNIEIIILSFLMCGTLTFSKQENSHRYPPRYEAHRSNSFSEGAAEEE
AAKEKEKNQGEPVRFGWVKGVMIRCMLNIWGVILYLRLPWITAQAGIALTWVIILMSVTVTTITGLSISAISTNGKVKSG
GTYFLISRSLGPELGGSIGLIFAFANAVAVAMHTVGFAETVRDLLQEYHSSMVDPTNDIRIIGVVTVTVLLGVSLAGMEW
EAKAQVLFFVVIMISFINYLVGTVIPPSEEKQAKGFFSYRANIFAQNFVPNWRGPDGSFFGLFSIFFPSATGILAGANIS
GDLKDPAVAIPKGTLVAIFWTTVSYLVLSATIGSCVVRDASGSINDTVLTGSMGCEGIACGYGWNFTECTQTHSCQHGLI
NYYQTMSMVSGFAPLITAGIFGATLSSALACLVSAPKVFQCLCKDELYPAIGFFGKGYGKNNEPIRGYLLTYLIAVGFIL
IAELNAIAPIISNFFLCSYALINFSCFHASITNSPGWRPSFKYYSKWAALFGAIVSVVIMFLLTWWAALIAIGIVVFLLG
YVLYKKPGVNWGSSVQAGSYNMALNYSVSLNEVDDHIKNYRPQCLVLTGPPNFRPALVDFVGTFTKKLSLMICGNVLIGP
CRPANAEVGLASKGHIKWLIKRKIKAFYTGISAEDLRTGAQVLMQASGLGRMKPNILVLGYKKNWQAAHPQTVEEYIGIL
HDAFDFKYGVCVMRVKEGLNISRIMQAHIVWGQKSCWARKEMFSTRLITLALGGKPDTKPSCVNPVFDPADIPQKNSEVP
AVMDTCQF
Protein IDhabu1_s499_g02320.t3
Definition-
>habu1_s499_g02320.t3
MKRGGHEMVELPGTEGEDHGCLNGRFTISTLIGPEGTGANHYSPTGAAPYDITQSSHCTHNSTFYMQTFGYNTVDVVPNY
ENYANTKISSEIKKPRPTLADLHSFLKSEVLQGRNIEIIILSFLMCGTLTFSKQENSHRYPPRYEAHRSNSFSEGAAEEE
AAKEKEKNQGEPVRFGWVKGVMIRCMLNIWGVILYLRLPWITAQAGIALTWVIILMSVTVTTITGLSISAISTNGKVKSG
GTYFLISRSLGPELGGSIGLIFAFANAVAVAMHTVGFAETVRDLLQEYHSSMVDPTNDIRIIGVVTVTVLLGVSLAGMEW
EAKAQVLFFVVIMISFINYLVGTVIPPSEEKQAKGFFSYRANIFAQNFVPNWRGPDGSFFGLFSIFFPSATGILAGANIS
GDLKDPAVAIPKGTLVAIFWTTVSYLVLSATIGSCVVRDASGSINDTVLTGSMGCEGIACGYGWNFTECTQTHSCQHGLI
NYYQTMSMVSGFAPLITAGIFGATLSSALACLVSAPKVFQCLCKDELYPAIGFFGKGYGKNNEPIRGYLLTYLIAVGFIL
IAELNAIAPIISNFFLCSYALINFSCFHASITNSPGWRPSFKYYSKWAALFGAIVSVVIMFLLTWWAALIAIGIVVFLLG
YVLYKKPGVNWGSSVQAGSYNMALNYSVSLNEVDDHIKNYRPQCLVLTGPPNFRPALVDFVGTFTKKLSLMICGNVLIGP
CRPANAEVGLASKGHIKWLIKRKIKAFYTGISAEDLRTGAQVLMQASGLGRMKPNILVLGYKKNWQAAHPQTVEEYIGIL
HDAFDFKYGVCVMRVKEGLNISRIMQAHINPVFDPADIPQKNSEVPAVMDTCQF

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Chromosome
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495