Gene
| Gene Model ID | habu1_s499_g02323 |
|---|---|
| Locus | habu1_scaffold499 : 1212552 ... 1230163 : + |
| To GenomeBrowser | habu1_scaffold499:1212552..1230163 |
| Genes list of scaffold | habu1_scaffold499 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| bardet-biedl syndrome 2 protein homolog | GO:0001103 GO:0007288 GO:0010629 GO:0014824 GO:0016020 GO:0021756 GO:0021766 GO:0021987 GO:0030534 GO:0031514 GO:0033365 GO:0034464 GO:0035058 GO:0036064 GO:0038108 GO:0040015 GO:0040018 GO:0042311 GO:0043001 GO:0045444 GO:0045494 GO:0048854 GO:0051216 GO:0060296 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s499_g02323.t1 | 1 | 1 | BBS2_N | 19 | 161 | 0.0 | 178.5 | 0.0 | 0.0 | 177.1 |
| habu1_s499_g02323.t1 | 1 | 1 | BBS2_Mid | 162 | 268 | 1.4013e-45 | 153.8 | 0.0 | 1.09301e-43 | 147.5 |
| habu1_s499_g02323.t1 | 1 | 1 | BBS2_C | 318 | 758 | 0.0 | 582.8 | 0.0 | 0.0 | 574.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s499_g02323.t1 | gi|327287826|ref|XP_003228629.1| | PREDICTED: Bardet-Biedl syndrome 2 protein isoform X2 [Anolis carolinensis] | 0.0 |
| habu1_s499_g02323.t1 | gi|602649052|ref|XP_007430937.1| | PREDICTED: Bardet-Biedl syndrome 2 protein [Python bivittatus] | 0.0 |
| habu1_s499_g02323.t1 | gi|543366032|ref|XP_005526375.1| | PREDICTED: Bardet-Biedl syndrome 2 protein homolog [Pseudopodoces humilis] | 0.0 |
| habu1_s499_g02323.t1 | gi|224064206|ref|XP_002189773.1| | PREDICTED: Bardet-Biedl syndrome 2 protein [Taeniopygia guttata] | 0.0 |
| habu1_s499_g02323.t1 | gi|729724736|ref|XP_010582688.1| | PREDICTED: Bardet-Biedl syndrome 2 protein [Haliaeetus leucocephalus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 4.3 |
| Venom grand-1 | 3.7 |
| Pit, infrared sensing | 4.3 |
| Nose | 7.0 |
| Brain-1 | 4.9 |
| Eye | 7.0 |
| fetal fibroblast | 7.3 |
| venom gland-2 | 3.0 |
| Brain-2 | 4.0 |
| Spleen | 2.4 |
| Lung | 3.7 |
| Liver | 4.2 |
| Kidney | 7.5 |
| Pancreas | 2.5 |
| Small intestine | 2.1 |
| Large intestine | 2.4 |
| Stomach | 2.7 |
| heart | 4.5 |
| ovary | 59.6 |
| cheek muscle | 3.8 |
Transcript
| Transcript ID | habu1_s499_g02323.t1 |
|---|---|
| Definition | - |
>habu1_s499_g02323.t1 ggcatccgccgactctgccgccgccgccatgctcgtgccggtcttcagcctgaagctcagccacaaaatcctgccccgcg gcgtggcgctgggcaggtacgacggaacccacccgtgcctgacggcggccacgcaggccggcaaggtttttattcacaat cctcatggacgtggacagcacacgaatgcaaaccgcttagcattaagtagccaggatgctgatatttctttgctgaacat caatgaagctgtcagttgtttgactgcagggatgttgaaccctgatcttggctgtgattccctcttagttggcacacgga ccagtttgttggcatacgacgtacacaacaatgctgatttgttttatgctggggttcccgatggagcaaactctatagcc gtaggaacgttgggagacatttcctgccccttagcaattattggcggaaactgttctctgcagggctttaattatgaagg aaaagatctgttctggacggtcactggtgacaatgttcgcgctctcgccttctgtgactttgacggtgatgggaaaaaag agcttattgttggatctgaggactttgatattagggtttttaaagaagatgagattgtggcggaaatgtctgagactgag atcgtcacggccctaaccgcgatgagccccgctcgcttcggctatgcgctggctaatggcacggtgggcatttacaacca ggccgcccgctactggagaattaaatctaaaaatcaggcgatgtgcatcagtgcctttgacattaattccgacggcgtct gcgaattgataactggctggtccagcgggannnnnntaagtataaagaagattctatatttaaccttcttccctgcttct ttcccaaagattaaacggctggcctggtttagaattctaccggcgttgcagaatatatcagtggctgccaccagaacaat cgacgcacgcagcgatcgaaccggagaagtcattttcaaggacaactttgctgcttccattgcgggaattgtgcagggag attacaggatggatggaagtacacagctgatctgctgctcagttgacggtgaagtgcgaggatacctgccagggggtcag gaggtgaaaggaagactgatggacaccagtgtggagcaagatctgattcgagggcttagtcagaagaagcaaaacctgct ccttgagctacgaaactatgaagaaaattcaaagcaggtggaactgaacactcaggtaaatgaaatggatggccaaaggg gtgtgatcccggcaaacacacagctccagactgcgttgtccgtcaatctgggatcggaaactgaatccgctcatgtagaa ctctgcatatccacatccaatgacacaattatccgagcggtgctgatcttcgctgaaggcatctttgaaaacgagagcca cgtaatccaccccactcttcagaatctctcgagcaacataaaagtcccgctctctccgccgaaagacgtcccggtggagc tgaacatcaaagccctggtgggatacaagaagagcacgcagttccatgtttttgagctgtcccgacaacttcctcgcttc tcgatgtattcgctctgcagcccagactctgcgaccagacctctgagctttgtaaaattcactctgggggagaaagtgca gatgggcatcacgtggataaaacagaatttcctgttacccgcggatgtggagatgcagaacgagttgctggaggtctgct ttgcctccctgcgcgacacaggacagttgtgcatccgaatgaatctcagtggagagatctccattcacaccgataacatt gatctggctggtgacctcatccaatcaatggcctccttttgggcaattgaggacttgcaggttgaagcagatttcccagt gtattttgaggaggtgcacaaagcttttgttggggtggacagttcccatacagtttgtcagaagctcacagccaacatgg ctgagagctccaattgcatccgcagcatgctggttcgagcagaagattcccgcctcatgggagactggagaaacatgaag aaacggtatatggacctgtatgacctcaacaaggatttattgtctcagtacaagattcgctgcagcaatcactcggagct tttaaataatctcaaagcagtcaatcaagccatccaacgagcgggacacctccgagttggtaaacacaaaatgcaagtga ttgctgcctgccgggatgctattaagaacaacagtgttaatatgctgatcaaaatcatgcgtctggggacaacctgctct tgatcagagtgaaggctggaggcgaaaactagcctaggttggcagtccagggagacaagcagaaagatctagcagcagat agacagtaggtgatgctgccagtttagtgcccggtaaagtacagtacgaagaccttactagggctgatcgttcgaccgct tgtggcagggaagagaaggccagtatcttggttctttctaaaatatcatgcttgcggagagatggccaagcttttgtgga cattacagaccaaatctgggattttcagaagccaaaaccgccctggaggctgtttatttaaaatagcagtttttgattct tcaataaaacttgacagacctcagtctatc |
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Protein
| Protein ID | habu1_s499_g02323.t1 |
|---|---|
| Definition | - |
>habu1_s499_g02323.t1 MLVPVFSLKLSHKILPRGVALGRYDGTHPCLTAATQAGKVFIHNPHGRGQHTNANRLALSSQDADISLLNINEAVSCLTA GMLNPDLGCDSLLVGTRTSLLAYDVHNNADLFYAGVPDGANSIAVGTLGDISCPLAIIGGNCSLQGFNYEGKDLFWTVTG DNVRALAFCDFDGDGKKELIVGSEDFDIRVFKEDEIVAEMSETEIVTALTAMSPARFGYALANGTVGIYNQAARYWRIKS KNQAMCISAFDINSDGVCELITGWSSGXXXSIKKILYLTFFPASFPKIKRLAWFRILPALQNISVAATRTIDARSDRTGE VIFKDNFAASIAGIVQGDYRMDGSTQLICCSVDGEVRGYLPGGQEVKGRLMDTSVEQDLIRGLSQKKQNLLLELRNYEEN SKQVELNTQVNEMDGQRGVIPANTQLQTALSVNLGSETESAHVELCISTSNDTIIRAVLIFAEGIFENESHVIHPTLQNL SSNIKVPLSPPKDVPVELNIKALVGYKKSTQFHVFELSRQLPRFSMYSLCSPDSATRPLSFVKFTLGEKVQMGITWIKQN FLLPADVEMQNELLEVCFASLRDTGQLCIRMNLSGEISIHTDNIDLAGDLIQSMASFWAIEDLQVEADFPVYFEEVHKAF VGVDSSHTVCQKLTANMAESSNCIRSMLVRAEDSRLMGDWRNMKKRYMDLYDLNKDLLSQYKIRCSNHSELLNNLKAVNQ AIQRAGHLRVGKHKMQVIAACRDAIKNNSVNMLIKIMRLGTTCS |
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