Gene
| Gene Model ID | habu1_s499_g02327 |
|---|---|
| Locus | habu1_scaffold499 : 1279418 ... 1325480 : - |
| To GenomeBrowser | habu1_scaffold499:1279418..1325480 |
| Genes list of scaffold | habu1_scaffold499 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| guanine nucleotide-binding protein g subunit partial | GO:0003924 GO:0004871 GO:0005525 GO:0007188 GO:0008152 GO:0031683 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s499_g02327.t1 | 3 | 1 | G-alpha | 7 | 51 | 0.0 | 439.7 | 1.0e-09 | 3.8e-06 | 25.8 |
| habu1_s499_g02327.t1 | 3 | 2 | G-alpha | 66 | 248 | 0.0 | 439.7 | 0.0 | 0.0 | 286.3 |
| habu1_s499_g02327.t1 | 1 | 1 | Arf | 87 | 188 | 5.5e-16 | 58.3 | 3.4e-16 | 1.2e-12 | 47.3 |
| habu1_s499_g02327.t1 | 3 | 3 | G-alpha | 250 | 351 | 0.0 | 439.7 | 7.90052e-42 | 2.9e-38 | 131.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s499_g02327.t1 | gi|696970318|ref|XP_009555426.1| | PREDICTED: guanine nucleotide-binding protein G(o) subunit alpha isoform X4 [Cuculus canorus] | 0.0 |
| habu1_s499_g02327.t1 | gi|696970311|ref|XP_009555422.1| | PREDICTED: guanine nucleotide-binding protein G(o) subunit alpha isoform X1 [Cuculus canorus] | 0.0 |
| habu1_s499_g02327.t1 | gi|696970315|ref|XP_009555425.1| | PREDICTED: guanine nucleotide-binding protein G(o) subunit alpha isoform X3 [Cuculus canorus] | 0.0 |
| habu1_s499_g02327.t1 | gi|556984253|ref|XP_005998079.1| | PREDICTED: guanine nucleotide-binding protein G(o) subunit alpha-like isoform X1 [Latimeria chalumnae] | 0.0 |
| habu1_s499_g02327.t1 | gi|558173080|ref|XP_006125518.1| | PREDICTED: guanine nucleotide-binding protein G(o) subunit alpha [Pelodiscus sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.3 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.2 |
| Nose | 17.2 |
| Brain-1 | 38.5 |
| Eye | 10.4 |
| fetal fibroblast | 2.5 |
| venom gland-2 | 0.1 |
| Brain-2 | 38.3 |
| Spleen | 1.3 |
| Lung | 0.9 |
| Liver | 0.0 |
| Kidney | 0.3 |
| Pancreas | 0.0 |
| Small intestine | 0.7 |
| Large intestine | 1.6 |
| Stomach | 0.3 |
| heart | 33.7 |
| ovary | 0.2 |
| cheek muscle | 0.4 |
Transcript
| Transcript ID | habu1_s499_g02327.t1 |
|---|---|
| Definition | - |
>habu1_s499_g02327.t1 cggccccatttgtgtcacgtgccggctcatggccccgttcacatacaggatcatccatgaagatggcttttctggagaag acgtgaagcagtacaagcctgtgatctatagcaacactattcaatccttggcagctattgtccgtgccatggacacgctg ggcatagaatacggggataaagaaagacggatcaatgtgtctccagacaagacgctgaagggaagctatctagattgctt agatcgaattggagctccggattatcagcccacagagcaagatatcctgagaaccagggtcaaaacaaccggcattgtag aaacccatttcacattcaaaaacctccatttcaggctgtttgatgttgggggtcagagatcggagcgtaagaagtggatc cactgttttgaggatgtcacggcaatcattttctgtgtcgcactgagtgggtatgaccaggtactccatgaagatgaaac aacgaatcgcatgcacgaatcactgaagctgtttgatagtatctgtaacaataaatggttcacagatacctccatcatcc tgttcctcaataagaaggacatcttcgaagagaagattaagaaatccccattaattatctgctttccagattacacagga cccagcaattttgtggacgcagtgacttacatccagacgcagtacgagagcaagaataagtcattcaacaaggagatata cacacacatcacctgtgccacagacaccaacaacatccagtttgtttttgatgctaaccgcatgcacgagtctttaatgc tcttcgactccatctgtaacaacaaattcttcattgatacctccatcattctcttcctcaacaagaaagacctgtttggt gagaagatcaaaaaatcacctctcaccatctgctttcctgaatacacaggacccaacacgtacgaagatgctgcagcgta tatccaagcacaatttgaaagcaaaaaccgttcgccgaacaaggagatttattgtcacatgacctgtgcaacagacacag gcaacatccaggtcgtatttgatgccgtaaccgacatcatcattgccaacaacctacgaggctgcggcttatactgaccc ctccccccgtccctcccctctttcttccctcccatcctgtatagcaagcagcatatttggaaacaatcacaacgagagga aaaaaataataatatataataaaatatttgaaaaaaaaaggcaaa |
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Protein
| Protein ID | habu1_s499_g02327.t1 |
|---|---|
| Definition | - |
>habu1_s499_g02327.t1 MAPFTYRIIHEDGFSGEDVKQYKPVIYSNTIQSLAAIVRAMDTLGIEYGDKERRINVSPDKTLKGSYLDCLDRIGAPDYQ PTEQDILRTRVKTTGIVETHFTFKNLHFRLFDVGGQRSERKKWIHCFEDVTAIIFCVALSGYDQVLHEDETTNRMHESLK LFDSICNNKWFTDTSIILFLNKKDIFEEKIKKSPLIICFPDYTGPSNFVDAVTYIQTQYESKNKSFNKEIYTHITCATDT NNIQFVFDANRMHESLMLFDSICNNKFFIDTSIILFLNKKDLFGEKIKKSPLTICFPEYTGPNTYEDAAAYIQAQFESKN RSPNKEIYCHMTCATDTGNIQVVFDAVTDIIIANNLRGCGLY |
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