Gene
| Gene Model ID | habu1_s5048_g15158 |
|---|---|
| Locus | habu1_scaffold5048 : 26306 ... 106943 : + |
| To GenomeBrowser | habu1_scaffold5048:26306..106943 |
| Genes list of scaffold | habu1_scaffold5048 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| protein af-9 isoform x2 | GO:0003002 GO:0005634 GO:0030111 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s5048_g15158.t1 | 1 | 1 | YEATS | 116 | 163 | 4.4e-11 | 42.3 | 4.5e-14 | 1.3e-10 | 40.8 |
| habu1_s5048_g15158.t1 | 1 | 1 | Phage_integrase | 560 | 740 | 2.6e-06 | 27.2 | 4.4e-09 | 1.3e-05 | 24.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s5048_g15158.t1 | gi|602636304|ref|XP_007425008.1| | PREDICTED: protein AF-9 [Python bivittatus] | 0.0 |
| habu1_s5048_g15158.t1 | gi|637262668|ref|XP_008101687.1| | PREDICTED: protein AF-9 isoform X2 [Anolis carolinensis] | 0.0 |
| habu1_s5048_g15158.t1 | gi|637262664|ref|XP_008101686.1| | PREDICTED: protein AF-9 isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s5048_g15158.t1 | gi|514719039|ref|XP_005013409.1| | PREDICTED: LOW QUALITY PROTEIN: protein AF-9 [Anas platyrhynchos] | 0.0 |
| habu1_s5048_g15158.t1 | gi|723539207|ref|XP_010310092.1| | PREDICTED: protein AF-9, partial [Balearica regulorum gibbericeps] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.8 |
| Venom grand-1 | 1.2 |
| Pit, infrared sensing | 0.8 |
| Nose | 1.3 |
| Brain-1 | 1.5 |
| Eye | 0.8 |
| fetal fibroblast | 0.9 |
| venom gland-2 | 2.4 |
| Brain-2 | 1.3 |
| Spleen | 1.0 |
| Lung | 2.6 |
| Liver | 1.2 |
| Kidney | 1.9 |
| Pancreas | 1.0 |
| Small intestine | 0.9 |
| Large intestine | 1.1 |
| Stomach | 2.0 |
| heart | 0.7 |
| ovary | 0.4 |
| cheek muscle | 1.1 |
Transcript
| Transcript ID | habu1_s5048_g15158.t1 |
|---|---|
| Definition | - |
>habu1_s5048_g15158.t1 ccaagtgtgtttaccaaggtcctagctatgccgccacacacctgcgactatctggacgacatcctcatccagtcgtcctc ccttccggccgcccagtcggacctaacgttggtgatcagggtcctccaggaccatgggttctcggtaaactttcaaaaga gccagacagttccttcgacccgactcctacacctaggtgccgtcgtagacacagtccgttgcctggtctacctctcctgg gaacgtcaggacaggataagggccttggtcctcaagtcgttttgtagagttctccagagtattcatactttacttactag ttgtggaagccacatagaaagatgcttcccaaaatctcagataattgtggtttatgtgtgcaaagatccaccgtacaaag ttgaagaatctgggtatgctgggtttattttgccaatagaggtttacttcaagaacaaggaagaaccgaagaaagtccgc tttgactatgatctgttcctgcatctggaaggacacccacctgtaaaccatcttcgctgtgaaaagcttactttcaacaa cccaacagaggagttcagaagaaagctgcttaaagctggcgggatcatggttatgtcagatggaacatcagttgcttcag ggcaaagtcttcatctccctaatcttcctactaattccctgtctttttctgaagtgaagaaaaaatcatctcatgggcca aaggagctgagcaagactgtgagcactagcagcagcagcagtagtagtaacaatttttcaaagccccataaattatcaaa ggagcacaaggaaaaatcttcaaaagactcaaaagaacataaaagtgccttcaaagaaccttccagggaacacaacaaat cttccaaagaatcctctaaaaaacccaaagaaaataaaccactaaaggatgaaaaaattgttcctaagatggccttcaaa gagcccaagcctatgtcaaaggagccaaaatcagaaaacaacatactgaccctaagtggtggacagcaacaagaaaagaa ggctgcctccaaaaggcctcccggtctggattctgaggacctttccgccaaaaagaagaagcgaagtggatcggaggctt tatttaaaagtttttctagcgctcccccactgatacttacttgctccagtgtggagaaaaaacagacaaaagacaaatct cagtttaaaattgggagagttaaaatggaaagtgagccgctggagaaaaagaaaaacacattaccccctttcaatgatat tgtggaccctaatgactccgatatggaggagaacgtgtcttcgaagtcagaagctgctcgtcgacccgctaccaatcgca tttacgactccacatggaaaagtttttgcaattggtgtggcagacagcaactggatatgtacaatctaaccattcctcag atcgttgactatcttctggacggcttggacagaggactggcacctgccaccattcataggcaggtggctgccctgtctac gttgctgtcttgtgctaatttgggtcccttagctcaccatcctaggatacgcgccttccttaaaggcgcatccaactctc gacctcccgtggtgcaccgatacccttcctgggagctccctcgggtgcttcgggcactcgtaaatcccccctttgaaccc attaacacggtaccattacgggctttgtctctcaaggttgtgttccttgtagtcatcacgtctgccagacgtatctcgga actggctgccctttcaatcagggaggatctctgcattttccaccaggaccgggtggtccttcgcttagatcctaccttta tacccaaagtcaactcgattttccacagaactcaggaggtcgtcttgccaaacttctctcccaatccttcccacgacctg gaacgtcagtggcgcacgctagacgttcgcagggcattaaagcgctacatcaaacgcacagcgccctttcggaagtctga ggccctcttcatctcgtttcgtccgtcctctctaggacagaaggtgtccacatctaccattggcaggtggattagggcct gcatcgcggaggcgtataagtcctcctcccaactggttccagatcgtatcacggcgcactccactcgcagcgctgcaacc tctgcggcgtgggccactcaggcatccatcgaggaggtttgcagggctgcgacatggtcttcaccttctccattcgtgcg ccattataaaattgatcgcttcgcctcggctgacgcctccttcggtcctttgaggtctataatgaaagatctgcattctg atgataatgaagatgaatctgatgaagcagatgagaatgacaatgactctgagatggagagacctataaatactcatggt ggaagtagagtgcgcagggttagtttaagtgacggaagtgacagtgatagcagttctgcttcttcacctctacaccatga tcctccacctttattaaaaaccaacaataaccagattctggaagtaaagagtcctataaaacaaagtaaatctgaaaaac agataaagaatggtgattgtgataagatccaaagtccataagggaagttaatattaggctaatcctagttcagattcaaa taatatgtagcgctattaaaaatgacttgtagtgctattaaa |
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Protein
| Protein ID | habu1_s5048_g15158.t1 |
|---|---|
| Definition | - |
>habu1_s5048_g15158.t1 MPPHTCDYLDDILIQSSSLPAAQSDLTLVIRVLQDHGFSVNFQKSQTVPSTRLLHLGAVVDTVRCLVYLSWERQDRIRAL VLKSFCRVLQSIHTLLTSCGSHIERCFPKSQIIVVYVCKDPPYKVEESGYAGFILPIEVYFKNKEEPKKVRFDYDLFLHL EGHPPVNHLRCEKLTFNNPTEEFRRKLLKAGGIMVMSDGTSVASGQSLHLPNLPTNSLSFSEVKKKSSHGPKELSKTVST SSSSSSSNNFSKPHKLSKEHKEKSSKDSKEHKSAFKEPSREHNKSSKESSKKPKENKPLKDEKIVPKMAFKEPKPMSKEP KSENNILTLSGGQQQEKKAASKRPPGLDSEDLSAKKKKRSGSEALFKSFSSAPPLILTCSSVEKKQTKDKSQFKIGRVKM ESEPLEKKKNTLPPFNDIVDPNDSDMEENVSSKSEAARRPATNRIYDSTWKSFCNWCGRQQLDMYNLTIPQIVDYLLDGL DRGLAPATIHRQVAALSTLLSCANLGPLAHHPRIRAFLKGASNSRPPVVHRYPSWELPRVLRALVNPPFEPINTVPLRAL SLKVVFLVVITSARRISELAALSIREDLCIFHQDRVVLRLDPTFIPKVNSIFHRTQEVVLPNFSPNPSHDLERQWRTLDV RRALKRYIKRTAPFRKSEALFISFRPSSLGQKVSTSTIGRWIRACIAEAYKSSSQLVPDRITAHSTRSAATSAAWATQAS IEEVCRAATWSSPSPFVRHYKIDRFASADASFGPLRSIMKDLHSDDNEDESDEADENDNDSEMERPINTHGGSRVRRVSL SDGSDSDSSSASSPLHHDPPPLLKTNNNQILEVKSPIKQSKSEKQIKNGDCDKIQSP |
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