Gene
| Gene Model ID | habu1_s5048_g15159 |
|---|---|
| Locus | habu1_scaffold5048 : 219756 ... 290539 : + |
| To GenomeBrowser | habu1_scaffold5048:219756..290539 |
| Genes list of scaffold | habu1_scaffold5048 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| sodium potassium calcium exchanger 2 isoform x2 | GO:0005262 GO:0006874 GO:0007601 GO:0007612 GO:0007613 GO:0008273 GO:0016021 GO:0035725 GO:0060291 GO:0060292 GO:0070588 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s5048_g15159.t2 | 1 | 1 | Na_Ca_ex | 223 | 360 | 4.1e-29 | 100.9 | 4.1e-32 | 2.0e-28 | 98.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s5048_g15159.t2 | gi|529445055|ref|XP_005242238.1| | PREDICTED: sodium/potassium/calcium exchanger 2 [Falco peregrinus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.0 |
| Nose | 1.1 |
| Brain-1 | 9.1 |
| Eye | 17.4 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 8.0 |
| Spleen | 4.2 |
| Lung | 0.0 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.0 |
| Large intestine | 0.0 |
| Stomach | 0.0 |
| heart | 0.0 |
| ovary | 0.1 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s5048_g15159.t1 |
|---|---|
| Definition | - |
>habu1_s5048_g15159.t1 gtattggagcttttttaccattgccggcaatggggtgggcgcggctctggtggtgggaaagtttaatattactgagtgca tatatatgctatgtgactttcatgaaattcaatgcgcaagtagaagaatgggtgaaaagtaaacttagcaacaacaaagt ggataaagtatcaccagaacctgatggaaagcctaaaccatgcctccaaaggggtggaagttctgcatctctgcacaata gtgtaatgaggaacagcattttccaacttatgatccacacacttgatccactggctgaaggaaagttcaaagaaagggca tctattcttcataagttggccaaaaagtccctggaaatagatggtgaaaaacggaatggaagagccaaaaatgctgaaaa aattgaagttgaagtgacaccacccagtgatggaccagtgcaaaatggaactgctgttggtgcagaagaggaagatgatg atgatagtcaaccccttagtctggcctggcctgatacgcctcggaagaagtttacgtatctgattattttgcctatcgtt tttccattatgggcaactctgcctgatgttagaaatccatcatccaaaaggtttttccctttcacattttttggatccat ttcctggatcgctatattttcttatctaatggtctggtgggcacatcaggttggagagaccattggaatcagtgaagaaa ttatgggcttgaccattttagctgctggtacctctatccctgacctaatcaccagtgtcattgtggcacgaaaaggactt ggggacatggcagtctctagttctgtaggaagtaacatctttgatatcactgtgggccttcctctgccgtggttcatcta tactgtaattaacaacttctccccagtggaagtgagcagcaatgggttattctgtgctattgttcttctcttcatcatgc ttctctttgtcatcctctctattgcattctgcaaatggaagatgaacaagttcctaggttttaccatgttcgggctctat tttatattcctgattgtcagcgtccttctggaagacaggattattgtgtgccccgtgtcagtctaataggacggaaatac tcctttgggaacaacaatcaaacagacaacaactgaaggggaaaaaactaaaaacaaattgtatctttagaactgtccaa cttaaaaacaatagaaaaaaagaggaactgaaatcacacaaggacaaatgcaaccgatgcagtagctgccaccgaacaaa aacgacacgcagagtgaaaactcataactttaaatatgctccaagaagctttcactgcttatttgttggaggtatgatac atctgttgtttatgagtatatttagcttcttgcatgggctctgtttaggatctagttccatgctcgtttttcaatttatc tgtaatatatatatatatatatatatatataaaacatatatatgtatatcaaaaagagagagctgcatctataaatagaa agaatattatctctctt |
|
| Transcript ID | habu1_s5048_g15159.t2 |
| Definition | - |
>habu1_s5048_g15159.t2 gtattggagcttttttaccattgccggcaatggggtgggcgcggctctggtggtgggaaagtttaatattactgagtgca tatatatgctatgtgactttcatgaaattcaatgcgcaagtagaagaatgggtgaaaagtaaacttagcaacaacaaagt ggataaagtatcaccagaacctgatggaaagcctaaaccatgcctccaaaggggtggaagttctgcatctctgcacaata gtgtaatgaggaacagcattttccaacttatgatccacacacttgatccactggctgaagagcttggatcatatggaaag ctaaaatattatgacacaatgactgaagaaggaaagttcaaagaaagggcatctattcttcataagttggccaaaaagtc cctggaaatagatggtgaaaaacggaatggaagagccaaaaatgctgaaaaaattgaagttgaagtgacaccacccagtg atggaccagtgcaaaatggaactgctgttggtgcagaagaggaagatgatgatgatagtcaaccccttagtctggcctgg cctgatacgcctcggaagaagtttacgtatctgattattttgcctatcgtttttccattatgggcaactctgcctgatgt tagaaatccatcatccaaaaggtttttccctttcacattttttggatccatttcctggatcgctatattttcttatctaa tggtctggtgggcacatcaggttggagagaccattggaatcagtgaagaaattatgggcttgaccattttagctgctggt acctctatccctgacctaatcaccagtgtcattgtggcacgaaaaggacttggggacatggcagtctctagttctgtagg aagtaacatctttgatatcactgtgggccttcctctgccgtggttcatctatactgtaattaacaacttctccccagtgg aagtgagcagcaatgggttattctgtgctattgttcttctcttcatcatgcttctctttgtcatcctctctattgcattc tgcaaatggaagatgaacaagttcctaggttttaccatgttcgggctctattttatattcctgattgtcagcgtccttct ggaagacaggattattgtgtgccccgtgtcagtctaataggacggaaatactcctttgggaacaacaatcaaacagacaa caactgaaggggaaaaaactaaaaacaaattgtatctttagaactgtccaacttaaaaacaatagaaaaaaagaggaact gaaatcacacaaggacaaatgcaaccgatgcagtagctgccaccgaacaaaaacgacacgcagagtgaaaactcataact ttaaatatgctccaagaagctttcactgcttatttgttggaggtatgatacatctgttgtttatgagtatatttagcttc ttgcatgggctctgtttaggatctagttccatgctcgtttttcaatttatctgtaatatatatatatatatatatatata taaaacatatatatgtatatcaaaaagagagagctgcatctataaatagaaagaatattatctctctt |
|
Protein
| Protein ID | habu1_s5048_g15159.t1 |
|---|---|
| Definition | - |
>habu1_s5048_g15159.t1 MGWARLWWWESLILLSAYICYVTFMKFNAQVEEWVKSKLSNNKVDKVSPEPDGKPKPCLQRGGSSASLHNSVMRNSIFQL MIHTLDPLAEGKFKERASILHKLAKKSLEIDGEKRNGRAKNAEKIEVEVTPPSDGPVQNGTAVGAEEEDDDDSQPLSLAW PDTPRKKFTYLIILPIVFPLWATLPDVRNPSSKRFFPFTFFGSISWIAIFSYLMVWWAHQVGETIGISEEIMGLTILAAG TSIPDLITSVIVARKGLGDMAVSSSVGSNIFDITVGLPLPWFIYTVINNFSPVEVSSNGLFCAIVLLFIMLLFVILSIAF CKWKMNKFLGFTMFGLYFIFLIVSVLLEDRIIVCPVSV |
|
| Protein ID | habu1_s5048_g15159.t2 |
| Definition | - |
>habu1_s5048_g15159.t2 MGWARLWWWESLILLSAYICYVTFMKFNAQVEEWVKSKLSNNKVDKVSPEPDGKPKPCLQRGGSSASLHNSVMRNSIFQL MIHTLDPLAEELGSYGKLKYYDTMTEEGKFKERASILHKLAKKSLEIDGEKRNGRAKNAEKIEVEVTPPSDGPVQNGTAV GAEEEDDDDSQPLSLAWPDTPRKKFTYLIILPIVFPLWATLPDVRNPSSKRFFPFTFFGSISWIAIFSYLMVWWAHQVGE TIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDITVGLPLPWFIYTVINNFSPVEVSSNGLFCA IVLLFIMLLFVILSIAFCKWKMNKFLGFTMFGLYFIFLIVSVLLEDRIIVCPVSV |
|