Gene
| Gene Model ID | habu1_s5048_g15161 |
|---|---|
| Locus | habu1_scaffold5048 : 325176 ... 343528 : + |
| To GenomeBrowser | habu1_scaffold5048:325176..343528 |
| Genes list of scaffold | habu1_scaffold5048 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| 40s ribosomal protein s6 | GO:0003735 GO:0005840 GO:0006412 GO:0042254 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s5048_g15161.t1 | 1 | 1 | Ribosomal_S6e | 9 | 132 | 0.0 | 214.2 | 0.0 | 0.0 | 214.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s5048_g15161.t1 | gi|602633320|ref|XP_007423540.1| | PREDICTED: 40S ribosomal protein S6 [Python bivittatus] | 0.0 |
| habu1_s5048_g15161.t1 | gi|327263697|ref|XP_003216654.1| | PREDICTED: 40S ribosomal protein S6 [Anolis carolinensis] | 0.0 |
| habu1_s5048_g15161.t1 | gi|701290389|ref|XP_010017471.1| | PREDICTED: 40S ribosomal protein S6 [Nestor notabilis] | 0.0 |
| habu1_s5048_g15161.t1 | gi|695160296|ref|XP_009508321.1| | PREDICTED: 40S ribosomal protein S6, partial [Phalacrocorax carbo] | 0.0 |
| habu1_s5048_g15161.t1 | gi|529445027|ref|XP_005242224.1| | PREDICTED: 40S ribosomal protein S6 isoform X1 [Falco peregrinus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 469.8 |
| Venom grand-1 | 1857.3 |
| Pit, infrared sensing | 763.3 |
| Nose | 458.5 |
| Brain-1 | 121.5 |
| Eye | 500.3 |
| fetal fibroblast | 766.7 |
| venom gland-2 | 1449.9 |
| Brain-2 | 105.9 |
| Spleen | 871.4 |
| Lung | 759.9 |
| Liver | 1487.0 |
| Kidney | 1121.6 |
| Pancreas | 1413.1 |
| Small intestine | 1353.2 |
| Large intestine | 758.8 |
| Stomach | 1069.3 |
| heart | 518.6 |
| ovary | 211.2 |
| cheek muscle | 701.1 |
Transcript
| Transcript ID | habu1_s5048_g15161.t1 |
|---|---|
| Definition | - |
>habu1_s5048_g15161.t1 tcgaggactaaaccagtcgtaagtcgaggactacccaaccggtcataagtcgaggactttccctgcccgggagcaccgtg catgcgtggttccgccccctgcgccggccgaggcatagctggcaagcggcagagacggagcaggccgaccaccagctggc ccagcccaagggagggcctttttgccagaaactggaaaatgcgtcataaatcatggtcacttcactgcaggaaactgcaa atggctgtaaatgttggtcggttgtcgaatgccccataggccatgtgacaggggtggacatcagaactttggaactggga cttccggtttttgcatctgcagcacatggccatgcaagagcggaaactcctcaatatttcattccctgccaccggctgcc agaaactcatcgaggtggacgatgagcgtaagctgcgcacgttctacgagaagcggatgactgccgaggtcccggctgat gctctgggtgaagagtggaagggatacgttgtccgcattagtggtggcaatgacaaacaaggtttccccatgaagcaagg tgtcctcactcatggccgtgtccgtctgctacttagcaagggccactcctgttaccgtcctaggagaactggagaacgaa aacgcaaatctgttcgaggatgcattgttgatgccaacttaagcgtcttgaacttggtcattataaagaaaggtgagaaa gatattcctggattgactgatcatactgtgccccgtcgccttggtcccaagagagctagcagaatccgaaagctgtttaa tctctccaaagaagatgacgtccgtcagtatattgtgaggagaccattgaacaaagaaggtaagaagccaaggaccaagg cacccaagatccaacgtttggtgaccccccgagtcctgcagcataagcgcagacgtattgctctaaagaaacaacgaact cagaagaataaggaagaagctgccgagtatgccaagcttctggctaagagaatgaaggaggcaaaagagaagcggcaaga acaaatagcaaagaggcgtagactgtcttctctgagagcctctacatctaaatctgaatcaagccagaagtaagccatga actgtgctcctaaaaaggttaaaataaaatttttatgatctgaacaaact |
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Protein
| Protein ID | habu1_s5048_g15161.t1 |
|---|---|
| Definition | - |
>habu1_s5048_g15161.t1 MAMQERKLLNISFPATGCQKLIEVDDERKLRTFYEKRMTAEVPADALGEEWKGYVVRISGGNDKQGFPMKQGVLTHGRVR LLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIIKKGEKDIPGLTDHTVPRRLGPKRASRIRKLFNLSKEDDVR QYIVRRPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTQKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRRRL SSLRASTSKSESSQK |
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