Gene
| Gene Model ID | habu1_s5048_g15165 |
|---|---|
| Locus | habu1_scaffold5048 : 473263 ... 496348 : + |
| To GenomeBrowser | habu1_scaffold5048:473263..496348 |
| Genes list of scaffold | habu1_scaffold5048 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s5048_g15165.t1 | 1 | 1 | HAUS6_N | 14 | 243 | 0.0 | 186.8 | 0.0 | 0.0 | 185.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s5048_g15165.t1 | gi|602633332|ref|XP_007423546.1| | PREDICTED: HAUS augmin-like complex subunit 6 [Python bivittatus] | 0.0 |
| habu1_s5048_g15165.t1 | gi|530612279|ref|XP_005297732.1| | PREDICTED: HAUS augmin-like complex subunit 6 isoform X1 [Chrysemys picta bellii] | 0.0 |
| habu1_s5048_g15165.t1 | gi|637262778|ref|XP_008101712.1| | PREDICTED: HAUS augmin-like complex subunit 6 isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s5048_g15165.t1 | gi|637262782|ref|XP_008101713.1| | PREDICTED: HAUS augmin-like complex subunit 6 isoform X2 [Anolis carolinensis] | 0.0 |
| habu1_s5048_g15165.t1 | gi|591374132|ref|XP_007061758.1| | PREDICTED: HAUS augmin-like complex subunit 6, partial [Chelonia mydas] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 3.2 |
| Venom grand-1 | 2.4 |
| Pit, infrared sensing | 3.5 |
| Nose | 3.1 |
| Brain-1 | 2.4 |
| Eye | 3.4 |
| fetal fibroblast | 8.8 |
| venom gland-2 | 2.8 |
| Brain-2 | 2.0 |
| Spleen | 3.7 |
| Lung | 3.6 |
| Liver | 2.7 |
| Kidney | 2.0 |
| Pancreas | 1.4 |
| Small intestine | 2.4 |
| Large intestine | 2.6 |
| Stomach | 2.0 |
| heart | 2.2 |
| ovary | 69.7 |
| cheek muscle | 1.9 |
Transcript
| Transcript ID | habu1_s5048_g15165.t1 |
|---|---|
| Definition | - |
>habu1_s5048_g15165.t1 gagttgggaggtccggcggggcgccggagagatgagcagccctttctcgcctccggcttgggagaaggagcacttctggc tctacctcttggctctgggcttcgatcccgcggtaaacgccgctgccgggaaactttcgactcacctccggctgggcgtg aacttgtttgatataccaaacaaagatgcatttcacattgttgcatggttcttattttcaaagctggaccggtcacactg taatgaggtttttagattttgttatcctccctcagataaaaaggcagactctgaattcaggaagcaatgctatgaatggc taaaaaggatatcagatgaatgtggaaacagttttcctccagttgttgcatcattatttctttctcctggtggacccaaa ttcattcatctaatgttccactttgcaagatatgtaataatgcatcatattaaagtggattctctaggtgctggcatacc caatccagaagcggtgaacttacgatctccagacttgactatggctgttgcaaaatgtcaagtggcactgaacagatttt cacagtgtctacagaaggaagatttgatgattcaagaacttcagaaaaaagcactactttttactaagcaaatcagagat ttaagatacggaaatgtggatctagacaaacgattgcaaaaaatggggaaaaaagttgattctggccagagtaataacgc agaaagaatcgaaaaagttcgctgtttatgggcaacagtaatggaaacagtgacatttttgcaaaaagaaagagaagtag tggattcagtagtaaaaggtcatgttgatcagtatacattagatggcacaagtgtttctgttagcattccaaggcctctg cttcaaaaagtagaaaaagaaatgtataaatttcctgttgggaatgtgtatgaaatgggaaaactgaacatgttaaccat tatccaattactaaccaaagccttggagttattgctgcatgagcgccggcattatgataagaaagcattcaaagtagacc ttcaggatcttgaaggaaacaccagattccagaatgagactttattggggctgaagtcactgaggcaaaaattaaaatgt aatgatcatatctcagtaactcaatcaattgctgaaaaacaacaggaatggcacttgaagtggaaaaattatcttggcca gtcaccttttcatttaattaaggatccaaaccctgcacttgatttattacccgctatgtctcctctttcttttactccgg ctactgaggaagcgtataaaagcagtgtcttcagtcaataccctgcattaattccagattcgaccaaaaagaatgttcag gcaaatgaatttgcaacagctgagaagacactgggaaatgaagattattcaacaaagacagtcacagaaaggaccttgaa acttgctacacattccgaaaagacatcaaatgtcgaaactcccaagaggactgataattcacggtttcaaatcttagagt ataaaggaagacattccaggcgaagagaaagtgggaataaaagacaagctgatccaggtagaaaatattcatcggctaaa aatgaagatcctttaaagaaggcccaagaacagctggctgaacaggtggcagatgtagtaatatctgattcagcccagaa cactgggaaggatgtaggggatctgatcagtaccttaatctcaaatcctttcttaacaaggaaacagattccacggactc cagaaaatctgattacagaaattagaagctcgtggaaaaaggctattcagaccgaaccaccttcaagtgaagctttgcct cattccgaagcaacggaaaagttctcgcagaatacagctcctgccttcagacaccatgtagattcaagtctgacgtggct tttgtcgccttgtatgtctgatgcagcagaatttccctttttaaatgcggagcctccgggtagtttgccacaaggcgtta ccgacgaatcgctgagccaccaagaggctcttaggccacgggatgaaatggtttgcgagaaagaattgccccttgctgct ccaggtcaagtggaaaacccggaaccagtcttcaagactctaaatcaaagtacgcatgaggtaagctgtggctctggcaa ccatactggatcagaggcttcgtcacacggtgtgggtcagaattctaccatgtgtgcaactttgttgagggatgcttctc aagcaatgggcagtactggttccgaaagccatgacgttatccagctaggcatacttcaagaaactctcccagaagaagga ggctccatcagtcttaatagcgtccatgatttggatgactcaggagaagaaaactccagagacagcaaacatgtgacaga ttgtctgccaggaaacgagtgcacgctagatttccagtctattctaaatcggtacgaggcgctgaaaaagactctacatg atcacccaccggttcctggaaagcaaatgccaaggtgcagatcagagtttaacctcagaccagcaagcctggaaatgaag gatgtgcttagccctgtgggaaaaccttacgcgtctgatgcagaacttgtcaagaaatcctcacgcccgagtcatcttga aagaaagaatagcttctcccctttatttgcgttatctccgctgcagcggagagagaggagggacatgcaggatcgaggag acgtatttaataaacggaaagaaaaataatttgaagatggatacaaaagaaccctcaactgcgaagatgaagtcattcca cggttttataatcatgatgcactgacttgaatggaatacttcatgagataaaagtgtttttgcaaacctcaacttttaat gttagtgttaactaattctgactataggctgcttgcacagttttataagataattttgtattatcagtgatgaaaacaat acagattaattgagatcttttaagaatagccacaaggagacccttatgtgttaaagaaatagcaataaaatgtcttatct aagtataggct |
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Protein
| Protein ID | habu1_s5048_g15165.t1 |
|---|---|
| Definition | - |
>habu1_s5048_g15165.t1 MSSPFSPPAWEKEHFWLYLLALGFDPAVNAAAGKLSTHLRLGVNLFDIPNKDAFHIVAWFLFSKLDRSHCNEVFRFCYPP SDKKADSEFRKQCYEWLKRISDECGNSFPPVVASLFLSPGGPKFIHLMFHFARYVIMHHIKVDSLGAGIPNPEAVNLRSP DLTMAVAKCQVALNRFSQCLQKEDLMIQELQKKALLFTKQIRDLRYGNVDLDKRLQKMGKKVDSGQSNNAERIEKVRCLW ATVMETVTFLQKEREVVDSVVKGHVDQYTLDGTSVSVSIPRPLLQKVEKEMYKFPVGNVYEMGKLNMLTIIQLLTKALEL LLHERRHYDKKAFKVDLQDLEGNTRFQNETLLGLKSLRQKLKCNDHISVTQSIAEKQQEWHLKWKNYLGQSPFHLIKDPN PALDLLPAMSPLSFTPATEEAYKSSVFSQYPALIPDSTKKNVQANEFATAEKTLGNEDYSTKTVTERTLKLATHSEKTSN VETPKRTDNSRFQILEYKGRHSRRRESGNKRQADPGRKYSSAKNEDPLKKAQEQLAEQVADVVISDSAQNTGKDVGDLIS TLISNPFLTRKQIPRTPENLITEIRSSWKKAIQTEPPSSEALPHSEATEKFSQNTAPAFRHHVDSSLTWLLSPCMSDAAE FPFLNAEPPGSLPQGVTDESLSHQEALRPRDEMVCEKELPLAAPGQVENPEPVFKTLNQSTHEVSCGSGNHTGSEASSHG VGQNSTMCATLLRDASQAMGSTGSESHDVIQLGILQETLPEEGGSISLNSVHDLDDSGEENSRDSKHVTDCLPGNECTLD FQSILNRYEALKKTLHDHPPVPGKQMPRCRSEFNLRPASLEMKDVLSPVGKPYASDAELVKKSSRPSHLERKNSFSPLFA LSPLQRRERRDMQDRGDVFNKRKEK |
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