Gene
| Gene Model ID | habu1_s5179_g15334 |
|---|---|
| Locus | habu1_scaffold5179 : 60126 ... 218013 : + |
| To GenomeBrowser | habu1_scaffold5179:60126..218013 |
| Genes list of scaffold | habu1_scaffold5179 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| fibroblast growth factor 18 isoform x1 | GO:0001525 GO:0001932 GO:0001957 GO:0001958 GO:0002063 GO:0003723 GO:0005105 GO:0005111 GO:0005576 GO:0005730 GO:0006259 GO:0006417 GO:0006461 GO:0008083 GO:0008284 GO:0008543 GO:0010824 GO:0030324 GO:0030949 GO:0032069 GO:0032332 GO:0033554 GO:0040007 GO:0043021 GO:0046983 GO:0048523 GO:0051252 GO:0070374 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s5179_g15334.t1 | 1 | 1 | Nucleoplasmin | 13 | 195 | 0.0 | 169.2 | 0.0 | 0.0 | 166.7 |
| habu1_s5179_g15334.t1 | 1 | 1 | FGF | 394 | 516 | 1.6e-36 | 124.7 | 2.9e-39 | 2.7e-36 | 124.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s5179_g15334.t1 | gi|602672645|ref|XP_007441824.1| | PREDICTED: nucleophosmin-like [Python bivittatus] | 0.0 |
| habu1_s5179_g15334.t1 | gi|327260956|ref|XP_003215298.1| | PREDICTED: nucleophosmin [Anolis carolinensis] | 0.0 |
| habu1_s5179_g15334.t1 | gi|637250877|ref|XP_008113501.1| | PREDICTED: fibroblast growth factor 18 isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s5179_g15334.t1 | gi|564249319|ref|XP_006263737.1| | PREDICTED: fibroblast growth factor 18 isoform X1 [Alligator mississippiensis] | 0.0 |
| habu1_s5179_g15334.t1 | gi|514768724|ref|XP_005024990.1| | PREDICTED: fibroblast growth factor 18 isoform X1 [Anas platyrhynchos] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 39.7 |
| Venom grand-1 | 67.2 |
| Pit, infrared sensing | 60.6 |
| Nose | 40.0 |
| Brain-1 | 20.4 |
| Eye | 27.6 |
| fetal fibroblast | 355.2 |
| venom gland-2 | 94.8 |
| Brain-2 | 22.2 |
| Spleen | 62.4 |
| Lung | 51.5 |
| Liver | 111.1 |
| Kidney | 81.9 |
| Pancreas | 133.5 |
| Small intestine | 77.4 |
| Large intestine | 46.1 |
| Stomach | 75.2 |
| heart | 47.6 |
| ovary | 172.5 |
| cheek muscle | 68.0 |
Transcript
| Transcript ID | habu1_s5179_g15334.t1 |
|---|---|
| Definition | - |
>habu1_s5179_g15334.t1 agtcttttttccccccctcctcctttttatcccgaatcttcggcagccgaggccggtgcttgaaagtgcgcaagcagcat ggaggacagcgatatggataacatgggctccctgcgcccgcagaccttccttttcggctgtgaactgaagggagataagc cataccactttaaggtgaacgatgaagaaaacgaacatcaactttctctaagaacagttagtttaggagttggtgctaaa gatgacttgcatgttgttgaagcagaagcattggactatgaaggcaaccagataaaagtgacactggcatccttgaagat gtcggttcagcctacggtttcattaggtggctttgaaattacacctccagtaattctgagattgaaaagtggtttggggc ctgtttatgtcagtggacaacaccttgtagctttagaggaagaaccagaatctgaagatgaagaggataaactacagcaa aatatggcaaaaagacctgcaggtgtgacattagctaaagttcccttgaaaaaagcaaggctggcaggcaaggatgatga cgatgaagatgatgatgatgatgatgatgatgacgacgacgatgaagaagatgatgatgaagacgaggacgaagatgatg aggcagataagactccacagaaaaaacctgccagagattcttttgtgaagaaaacaccaaaatcaaaacagaatggaaaa gattctaaattggcaacaccaaagttgacaacatccaaattgaaagtacaagaatccccaaaagaaaaggcaccagtgac tcccaaatcaccaaggcctgtaaaatcaccaaaacaattctctatagaggagataaaagcaaaaatgcagacaattatgg aaaagggaagtaatcttcctaagttagaagccaagtttgcaaattatattaagagttgttacaaggcagaagacccgaag gtgattcaagagctctggcagtggaggcagtctttgtaccagattgatgtcaataggttttggcttgatgctcagccaag tctaggtaatgttatggtaattgattacagtgccaatttatgcagggtgaggcaggttatagatgatgtacaggtcaatt tgacgctgctgaagcattgcaacgttgtcttgctgctgtccttgtataagatgtttgttgctgaagaaaatgtggatttt cggatacatgtggaaaatcagacacgagcacgagacgatgtcagcaggaagcagctcagactttatcagctctacagccg aaccagtgggaagcatatccaggtgctgggaaggcggatcagtgccaaaggagaagatggagacaaatatgcccagcttc tagtggaaacagacacatttggcagtcaagtccggatcaaagggaaagagacagacttttacctttgtatgaacaggaaa ggaaagctagtagggaagccagatggcaccagcaaagaatgtgtcttcattgaaaaagtcttggagaacaactacacggc tttgatgtcggcaaagtactcaggctggtatgttggattcaccaaaaaagggaggccccggaaagggcccaagacccggg agaaccagcaagatgtccactttatgaaacgatatccaaagggacaagtggacttacagaaacctttcaagtacaccaca gtgacgaagaggactaggagaatacgaccaaccaaccccagttaaaagaccaaggcagtgtcttacaaataaactacaag aatagactgtaccag |
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Protein
| Protein ID | habu1_s5179_g15334.t1 |
|---|---|
| Definition | - |
>habu1_s5179_g15334.t1 MEDSDMDNMGSLRPQTFLFGCELKGDKPYHFKVNDEENEHQLSLRTVSLGVGAKDDLHVVEAEALDYEGNQIKVTLASLK MSVQPTVSLGGFEITPPVILRLKSGLGPVYVSGQHLVALEEEPESEDEEDKLQQNMAKRPAGVTLAKVPLKKARLAGKDD DDEDDDDDDDDDDDDEEDDDEDEDEDDEADKTPQKKPARDSFVKKTPKSKQNGKDSKLATPKLTTSKLKVQESPKEKAPV TPKSPRPVKSPKQFSIEEIKAKMQTIMEKGSNLPKLEAKFANYIKSCYKAEDPKVIQELWQWRQSLYQIDVNRFWLDAQP SLGNVMVIDYSANLCRVRQVIDDVQVNLTLLKHCNVVLLLSLYKMFVAEENVDFRIHVENQTRARDDVSRKQLRLYQLYS RTSGKHIQVLGRRISAKGEDGDKYAQLLVETDTFGSQVRIKGKETDFYLCMNRKGKLVGKPDGTSKECVFIEKVLENNYT ALMSAKYSGWYVGFTKKGRPRKGPKTRENQQDVHFMKRYPKGQVDLQKPFKYTTVTKRTRRIRPTNPS |
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