Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s5179_g15337
Locus habu1_scaffold5179 : 431016 ... 439029 : +
To GenomeBrowser habu1_scaffold5179:431016..439029
Genes list of scaffold habu1_scaffold5179

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s5179_g15337.t1 gi|390335294|ref|XP_001198200.2| 2.0e-09
habu1_s5179_g15337.t1 gi|390363511|ref|XP_001201605.2| 4.0e-09
habu1_s5179_g15337.t1 gi|512896808|ref|XP_004923999.1| 1.0e-05
habu1_s5179_g15337.t1 gi|512906577|ref|XP_004926231.1| 1.0e-05

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.0
Venom grand-1 0.0
Pit, infrared sensing 0.0
Nose 0.0
Brain-1 0.0
Eye 0.0
fetal fibroblast 0.0
venom gland-2 0.0
Brain-2 0.0
Spleen 0.0
Lung 0.0
Liver 0.3
Kidney 0.0
Pancreas 0.0
Small intestine 0.0
Large intestine 0.0
Stomach 0.0
heart 0.0
ovary 0.0
cheek muscle 0.0

Transcript
Transcript IDhabu1_s5179_g15337.t1
Definition-
>habu1_s5179_g15337.t1
ccggtcataagtcgaggactacccaaccggtcataagtcgaggactttccctgcccgggagcgccgcgcatgcgtggttc
tgccccctgcgctggccgaggcatagctggcaagcggcagagacggagcaggccaaccaccagctggcccagctcaaggg
agactggatttggcattttcgtccacctatcgactccttcccaaggatctggaataggcagatgtttgatggtgttaaag
ctaagtgtaattttcaagaacaaacctccccctatgcctgaaatgtttgcaatcgcaagaactgatggcaactggaccaa
agcagtcatagaatggatcccacttgataaaaagcgtccagaaaagagacctaaagcaagatggagcaacgacatcagca
agtatggtgggcccaactggcaaaagaaagcccaggaccgtattggttggaaacatacggaaaagaccttcatcctgcag
tggatagacaatggctaaaatgatgaagatgacgatgtgctatccatgaatttgcatagctgcccaatatgaacaccgca
ttaaacaaaaaccaaactgaacaagataaacaattcctattaaaaacaatgt

Protein
Protein IDhabu1_s5179_g15337.t1
Definition-
>habu1_s5179_g15337.t1
MRGSAPCAGRGIAGKRQRRSRPTTSWPSSRETGFGIFVHLSTPSQGSGIGRCLMVLKLSVIFKNKPPPMPEMFAIARTDG
NWTKAVIEWIPLDKKRPEKRPKARWSNDISKYGGPNWQKKAQDRIGWKHTEKTFILQWIDNG

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