Gene
| Gene Model ID | habu1_s5179_g15341 |
|---|---|
| Locus | habu1_scaffold5179 : 540044 ... 559494 : - |
| To GenomeBrowser | habu1_scaffold5179:540044..559494 |
| Genes list of scaffold | habu1_scaffold5179 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| f-box wd repeat-containing protein 11- partial | EC:6.3.2.19 GO:0000209 GO:0004842 GO:0005634 GO:0005813 GO:0005829 GO:0006470 GO:0019005 GO:0031146 GO:0031648 GO:0042347 GO:0042753 GO:0045862 GO:0045892 GO:0045893 GO:0046983 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s5179_g15341.t1 | 1 | 1 | Beta-TrCP_D | 45 | 84 | 4.1e-29 | 99.9 | 8.2e-33 | 6.1e-29 | 99.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s5179_g15341.t1 | gi|562861322|ref|XP_006159011.1| | PREDICTED: F-box/WD repeat-containing protein 11-like, partial [Tupaia chinensis] | 0.0 |
| habu1_s5179_g15341.t1 | gi|700415849|ref|XP_009945868.1| | PREDICTED: F-box/WD repeat-containing protein 11-like, partial [Leptosomus discolor] | 0.0 |
| habu1_s5179_g15341.t1 | gi|545878117|ref|XP_005657695.1| | PREDICTED: F-box/WD repeat-containing protein 11 [Sus scrofa] | 0.0 |
| habu1_s5179_g15341.t1 | gi|507702603|ref|XP_004644905.1| | 0.0 | |
| habu1_s5179_g15341.t1 | gi|697037920|ref|XP_009581403.1| | PREDICTED: F-box/WD repeat-containing protein 11, partial [Fulmarus glacialis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.7 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.3 |
| Nose | 0.4 |
| Brain-1 | 0.6 |
| Eye | 0.4 |
| fetal fibroblast | 0.7 |
| venom gland-2 | 0.3 |
| Brain-2 | 0.6 |
| Spleen | 0.2 |
| Lung | 0.6 |
| Liver | 0.4 |
| Kidney | 0.8 |
| Pancreas | 1.8 |
| Small intestine | 0.5 |
| Large intestine | 0.5 |
| Stomach | 0.3 |
| heart | 0.3 |
| ovary | 2.0 |
| cheek muscle | 1.4 |
Transcript
| Transcript ID | habu1_s5179_g15341.t1 |
|---|---|
| Definition | - |
>habu1_s5179_g15341.t1 ggtcgcggcattaaaaaggttgagaaccactgatttagccctttttcctgtctagtttacctgggagggctgatgttccg tgactgttgttatgctgttggaaattggaatacagtcaagactcagttataatatcctcaaaacttcttcatttgtcgtt ggctttcaaatcctttggtgccattctgcatgcgatgttcagcataagttcaagcaactgtgtacaacctactgcttctc tttggggtgggagaggcaggaagcagctgtagatactgaacctgatctttgttcccgttcatattggggtctcatgtcca ggaggggatagcaagtgatgcacaattaagccattgcgccgtagaaacatgtttaaacgcttgtcatatgaaaagaacac gtcagtaatggaggatcagaatgaagatgagtctccaaagaaaaacacattgtggcagataagcaatggaacttcatctg taatagtctcaaggaagcgaccatctgaaggaaactacgaaaaggaaaaagacttgtgtattaagtattttgaccagtgg tctgaatcagatcaggttgaatttgtggaacacctcatttcacgaatgtgtcactatcagcatggacatattaattccta cctaaagcccatgctgcaaagggattttatcactgctttaccaggtatttgagttatttgaggaaatgggagccaaaatt tttgaggatcacagtaatctacgaagacatctcctgaagcatcaggactgtaatttggagagtggttgagaatgggaatg ggatgtagaggcttcagctctcagcctgtataggtggtagagagagaatggcattgctgaaaatttgacattttgctgcc agatattgactctgtgatctaaggtttttgtggggtcctatggatcataaattgcccgccttttttaaagggatatataa ttctttgatcaaatgcatgttttggagcccagggtaataaacatgaattctaactttcgcgca |
|
Protein
| Protein ID | habu1_s5179_g15341.t1 |
|---|---|
| Definition | - |
>habu1_s5179_g15341.t1 MEDQNEDESPKKNTLWQISNGTSSVIVSRKRPSEGNYEKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLK PMLQRDFITALPGI |
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