Gene
| Gene Model ID | habu1_s5179_g15344 |
|---|---|
| Locus | habu1_scaffold5179 : 647651 ... 671074 : - |
| To GenomeBrowser | habu1_scaffold5179:647651..671074 |
| Genes list of scaffold | habu1_scaffold5179 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| stress-70 mitochondrial | GO:0005524 GO:0005925 GO:0006457 GO:0006611 GO:0019899 GO:0042645 GO:0044822 GO:0051082 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s5179_g15344.t1 | 1 | 1 | HSP70 | 49 | 646 | 0.0 | 892.6 | 0.0 | 0.0 | 892.4 |
| habu1_s5179_g15344.t1 | 1 | 1 | MreB_Mbl | 176 | 416 | 7.9e-17 | 60.8 | 3.2e-18 | 1.2e-14 | 53.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s5179_g15344.t1 | gi|327261026|ref|XP_003215333.1| | PREDICTED: stress-70 protein, mitochondrial [Anolis carolinensis] | 0.0 |
| habu1_s5179_g15344.t1 | gi|530652252|ref|XP_005312448.1| | PREDICTED: stress-70 protein, mitochondrial [Chrysemys picta bellii] | 0.0 |
| habu1_s5179_g15344.t1 | gi|558128810|ref|XP_006115858.1| | PREDICTED: stress-70 protein, mitochondrial [Pelodiscus sinensis] | 0.0 |
| habu1_s5179_g15344.t1 | gi|533134471|ref|XP_005382153.1| | PREDICTED: stress-70 protein, mitochondrial [Chinchilla lanigera] | 0.0 |
| habu1_s5179_g15344.t1 | gi|507696022|ref|XP_004643308.1| | PREDICTED: stress-70 protein, mitochondrial [Octodon degus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 36.2 |
| Venom grand-1 | 48.7 |
| Pit, infrared sensing | 51.6 |
| Nose | 45.0 |
| Brain-1 | 27.4 |
| Eye | 38.6 |
| fetal fibroblast | 160.0 |
| venom gland-2 | 82.5 |
| Brain-2 | 29.6 |
| Spleen | 43.6 |
| Lung | 28.2 |
| Liver | 111.7 |
| Kidney | 282.3 |
| Pancreas | 97.7 |
| Small intestine | 51.5 |
| Large intestine | 45.3 |
| Stomach | 72.8 |
| heart | 115.8 |
| ovary | 87.2 |
| cheek muscle | 124.1 |
Transcript
| Transcript ID | habu1_s5179_g15344.t1 |
|---|---|
| Definition | - |
>habu1_s5179_g15344.t1 ccgcggccttcctcccgctgccaccatgttgagcgctgcccgcgtgctcgttctgcgccgaggagggggagtcctggggc ccgcccaggtcatctggaatggtttaagtcaagatatcctcagaactgtagcaaggaggaattatgcgtcagaagcaatc aaaggagcagttattgggattgatcttggcacaaccaactcttgtgtggcagtcatggaagggaagcaggcaaaagtgct tgaaaactcagaaggtgccagaaccaccccttctgttatagcattttctggtgatggagagcgattggttggcatgccag ctaaaagacaggcagtaacaaatcctcataatacactctatgcaaccaagcgtctgattgggcggcgatatgatgatcca gaagtgcagaaagatatcaagaatgtcccttttaaaattgtacgtgcttccaatggtgatgcctgggtagaatctcatgg gaagctctattctccgagccagattggtgcttttattttaatgaagatgaaagagactgcagaaaattacctggggcatc ctgccaaaaatgctgtcatcacagttcctgcttatttcaatgattcccagagacaggctactaaagatgctggacagatt gctgggttgaatgttttgagagttattaatgagccaacagctgcagccctagcttatggattagataaggttgaagacaa agtaattgcagtttatgatttgggtggtggcacatttgatatttctatcttggaaattcagaagggagtgtttgaggtca aatccacaaatggtgacactttcttgggtggtgaagattttgaccaagccctgttgcagcatatagtaaaagaattcaaa agagaaacaggggttgatctgactaaagataatatggctctgcaaagagtgagggaagcttccgagaaagcaaaatgtga actttcttcttcagtccagaccgacattaacttgccataccttacaatggatgcctcaggaccaaaacatttgaatatga aactgtctcggtctcagtttgaggggattgtggcagatctgattaaaaggacaatagcgccttgccagaaagccatgcaa gatgctgaagttagcaagagtgacattggagaagttatcttggttggtggcatgactagaatgccaaaggtacagcagac tgtacaagatatgtttggacgttctccgagtaaagcagtaaatcctgatgaagctgttgctatgggtgctgccatccaag gaggagtgttggctggagatgtcactgatgtgctgttgttggatgtcaccccactttccctgggaattgagactctaggt ggagttttcactaagcttattaataggaatacaactatcccaaccaagaagagccaggtattttcgacagctgctgatgg gcagactcaagtagagatcaaagttcatcagggtgaacgggaaatggctggtgacaataaactacttggccagtttactt tggttgggattccaccagcaccaaggggagtgccccagattgaggtaacatttgacatcgatgcaaacggaattgttcat gtatctgcaaaagacaaaggtacaggacgagaacaacagattgtcatccagtcttccggtggtcttagtaaagatgatat tgaaaacatggtaaaaaatgcagaaaaatatgcagaagaagacaggcggaaaaaggaacgcgttgaagctgtaaacatgg cagaaggaataatccacgacacagaatccaagatggaagagtttaaagatcagttgcctgcagatgaatgcagcaaattg aaggaagaaattgcaaaaatgcgggagttactggctcgtaaagatagtgaaacaggcgaaaacatccggcaggcagcaat gtcccttcaacaagcatccctgaaactttttgaaatggcctacaaaaagatggcatcagagcgagagagttccggaagct cacaaggctctggctcacatgactcgggaagctctggggatcagaaggaggaaaagcagtaaattgcagtcttgtgtaga ctggaacagaaagaggacactattccacagcttcatagccaaaaggactttcctgagcagctgtggactgatttatgtct tactgtgtttttgcagtattctatacataactttctgaaatgtataaatttagtcaaattgctatctgatttaaaaaaaa aattaatgcaagataacgtttagaggtcagtgacagttttcactgagaattcctggcaatctttcttccgagcagaagga attggcttgtttaatttgaaggtctagaaaccatgtctcaaattcagagtgggagtaggattcatcattgctgaattgtg aattccatccttaataacggagtctcctctgggaacaggtttctgcttctgggaagagatgatattgggacctggggtca tcggctgacaatttacttgggaaaagtataagcagacctacaccttagctttaatataaaaaaaatgtgacttattttaa tatagctgcaaccacaagacaacgtggatactccatgcattgtttttgtagcttttctgctctgtccaatgtctttttcc ttgcaggaaatctgattccctattaataaattgttctcggttgaccaagtagtctgtgtaaaaatttgtttccttgcccc aatggtattcctagataccatgcctgctgtagacctaagttgcatttttttaaaattttcataggtagttcccacaggtg gtaatgtatatgaatgtaatcttgcaggatccaaataaaagttatattgcacttcgtgcttctttggtactgtccttatc aaatgagacacaaattgggggttattttacctctgttaatgtgtatctcaaaaagcataattcttcattgttgatctgct atacaattttgcaaatgtactaaatgaaaagaataaagattttgagctaatacaacttg |
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Protein
| Protein ID | habu1_s5179_g15344.t1 |
|---|---|
| Definition | - |
>habu1_s5179_g15344.t1 MLSAARVLVLRRGGGVLGPAQVIWNGLSQDILRTVARRNYASEAIKGAVIGIDLGTTNSCVAVMEGKQAKVLENSEGART TPSVIAFSGDGERLVGMPAKRQAVTNPHNTLYATKRLIGRRYDDPEVQKDIKNVPFKIVRASNGDAWVESHGKLYSPSQI GAFILMKMKETAENYLGHPAKNAVITVPAYFNDSQRQATKDAGQIAGLNVLRVINEPTAAALAYGLDKVEDKVIAVYDLG GGTFDISILEIQKGVFEVKSTNGDTFLGGEDFDQALLQHIVKEFKRETGVDLTKDNMALQRVREASEKAKCELSSSVQTD INLPYLTMDASGPKHLNMKLSRSQFEGIVADLIKRTIAPCQKAMQDAEVSKSDIGEVILVGGMTRMPKVQQTVQDMFGRS PSKAVNPDEAVAMGAAIQGGVLAGDVTDVLLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKV HQGEREMAGDNKLLGQFTLVGIPPAPRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVIQSSGGLSKDDIENMVKNAE KYAEEDRRKKERVEAVNMAEGIIHDTESKMEEFKDQLPADECSKLKEEIAKMRELLARKDSETGENIRQAAMSLQQASLK LFEMAYKKMASERESSGSSQGSGSHDSGSSGDQKEEKQ |
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