Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s5195_g15350
Locus habu1_scaffold5195 : 104696 ... 107830 : +
To GenomeBrowser habu1_scaffold5195:104696..107830
Genes list of scaffold habu1_scaffold5195

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s5195_g15350.t1 gi|675884030|ref|XP_009027517.1| hypothetical protein HELRODRAFT_164299 [Helobdella robusta] 9.0e-36

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.7
Venom grand-1 0.3
Pit, infrared sensing 4.5
Nose 1.2
Brain-1 0.8
Eye 2.4
fetal fibroblast 0.8
venom gland-2 0.6
Brain-2 0.8
Spleen 0.6
Lung 0.5
Liver 0.5
Kidney 0.3
Pancreas 0.4
Small intestine 0.4
Large intestine 0.4
Stomach 0.4
heart 0.9
ovary 0.1
cheek muscle 0.4

Transcript
Transcript IDhabu1_s5195_g15350.t1
Definition-
>habu1_s5195_g15350.t1
ccgactcctactaaatttagattggaattaaaaaaaaaaagcaagtttaaatgtcccaattcacaaaaagttataattaa
tgacttctctactgtaagaagaccaatgcatgcagtgcctcacgtaaccgcaaaacgaacacgttaagtgaccgtgaaga
agcatgcttttcatgtgcttcactatatggcacacaacgcacaattaggagcggcaatacttgtactttccatagtgttg
tgttctgctgttacagggaacatgactatgggattctactagggaaatcatgttttataataaatgccccttcctggatc
ctcccactgccctatcttcagcagcagatcagcacacaaaaaggagaaggcagcagcttctgcccaactacctctctctg
ctagaagagcttagaagaacttggtggaacagcttcttggattcaactggaaagaggcatcctaaacaatggcaaaaaga
ctgctaacaacaaacacgacaaagtctactgtttatgagcactttgcattatcaagtgatggaaaacattacgtgtgcca
atgtattagaaaagatgatgatggtgaaaaacaatgtgatgcaaaaattagcagtttcagtgggcctgataaaaatgcac
ctacaagagcatcaaatttgaaaagacacttacaggcgttttcatcccaaagtgttagaagccatgaatgagaaagatag
caatgaaaacattgcatctacttctgtgacaaaaaacgttcagaaatctactggagaacaatcacaaataagaaaattct
ttatatctgacaaagttaccataaggatgacaccagaaaaattcaaacaccacattattgaaatggtagtaaagnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaaaacttggtgtttctctggaaagagaaagtataaggaaac
ttataattgaggaggccaaatgtaaaaaggaagaactacagaaagttctgaaaggacgttttgtcttccttaaaatggat
gcatgcacacgtcacagagtcaattatttcgcaattaatgttagatttgtggatgaaaataacaaaacaataacacggac
cctcggattaaaggacactcaggcacatcacaccagtgattaccttcagaagttagttgagggtgttctagaagattttg
aaattaaaaaggaacagattttatgtgttgtgacagataacgcttctaacatgttgagcacaattgagaagatgaacgca
gatgaagaaggtaagaaacagatattagagttagaggaagacagctctgcaagtattggagaaagtttagaaactgaaga
gaatgctgacatttttttagacaactttgttgaagaagcattgaagcttgctactattcatcatatgcgatgtgctgttc
atacactacaacttgccataagagatggattaaaagatcgccatgcagctacactaattggcaaattacgacaatggaca
caaacaaaagagctggagaaccttctttctcaccccttcactgtcaccaagaggttgcaatgtgacgatctaaccccggg
taaattcctcttggaatggaagagcctgttatatcgcctgaacaaaaatggagggttaatagctgagggcattgcatctt
caatgatgaaaagagagagtcttttgctggaaaatgaaatcttgttagtggctatttatgtcgacccaatgagccgactt
ttgttgaacagtgaacagactgctactgggaaaaaggccctctatgatgtagcagttcgcatgaagggattacgacctga
aatacctccacaggaggatgaagttcttttaagcaatagtggtaactcaggatcatcttcttcaaacgaagaattagact
ttgattccttcttagacaaaatggaagttgctaaaggaaagcgacgtcgcataagcgttacagaaccagtaaatgtccaa
ataaaaaaattccaacaggagttttataaagcactaaaagaagttgaaaagtatgatcgctcatcaaaacttactgttga
agaagccatccttgtttatccagagatcgttagtgatgtggccagaatagttactgcaatgccacccacccaagtcagta
tcgaaagattattttcagccctaaaaataataaagtctgacttaagagcctctatgaaagaggatctggcagaggcaatt
ctcttccttagaactctacattgaattgatttgcatttgctaagcctataactacatttcaagattaatataaaccattt
ctaggttttacagattttgtttttggttcatatagataagctttgtttttgttctaaaacaaccaaataatgtggtttgt
atttttgaactggtaaagttcctgttcctgatgtttatgcctgctgctactatccagccacttgattaattaaattaata
aaaaaaaattaataaaactttgttgttttcattgtgtt

Protein
Protein IDhabu1_s5195_g15350.t1
Definition-
>habu1_s5195_g15350.t1
MDACTRHRVNYFAINVRFVDENNKTITRTLGLKDTQAHHTSDYLQKLVEGVLEDFEIKKEQILCVVTDNASNMLSTIEKM
NADEEGKKQILELEEDSSASIGESLETEENADIFLDNFVEEALKLATIHHMRCAVHTLQLAIRDGLKDRHAATLIGKLRQ
WTQTKELENLLSHPFTVTKRLQCDDLTPGKFLLEWKSLLYRLNKNGGLIAEGIASSMMKRESLLLENEILLVAIYVDPMS
RLLLNSEQTATGKKALYDVAVRMKGLRPEIPPQEDEVLLSNSGNSGSSSSNEELDFDSFLDKMEVAKGKRRRISVTEPVN
VQIKKFQQEFYKALKEVEKYDRSSKLTVEEAILVYPEIVSDVARIVTAMPPTQVSIERLFSALKIIKSDLRASMKEDLAE
AILFLRTLH

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