Gene
| Gene Model ID | habu1_s5195_g15353 |
|---|---|
| Locus | habu1_scaffold5195 : 222366 ... 235815 : + |
| To GenomeBrowser | habu1_scaffold5195:222366..235815 |
| Genes list of scaffold | habu1_scaffold5195 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| transcriptional adapter 2-beta | GO:0003677 GO:0030914 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s5195_g15353.t1 | 1 | 1 | ZZ | 9 | 46 | 9.2e-06 | 25.1 | 5.3e-09 | 2.6e-05 | 23.6 |
| habu1_s5195_g15353.t1 | 1 | 1 | Myb_DNA-binding | 68 | 110 | 1.3e-09 | 37.9 | 1.1e-12 | 5.4e-09 | 35.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s5195_g15353.t1 | gi|602645116|ref|XP_007429000.1| | PREDICTED: transcriptional adapter 2-beta isoform X1 [Python bivittatus] | 0.0 |
| habu1_s5195_g15353.t1 | gi|637292090|ref|XP_008107283.1| | PREDICTED: transcriptional adapter 2-beta [Anolis carolinensis] | 0.0 |
| habu1_s5195_g15353.t1 | gi|564229045|ref|XP_006258967.1| | PREDICTED: transcriptional adapter 2-beta [Alligator mississippiensis] | 0.0 |
| habu1_s5195_g15353.t1 | gi|542153859|ref|XP_005485790.1| | PREDICTED: transcriptional adapter 2-beta [Zonotrichia albicollis] | 0.0 |
| habu1_s5195_g15353.t1 | gi|591363334|ref|XP_007056571.1| | PREDICTED: transcriptional adapter 2-beta [Chelonia mydas] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.8 |
| Venom grand-1 | 3.0 |
| Pit, infrared sensing | 2.8 |
| Nose | 2.8 |
| Brain-1 | 2.0 |
| Eye | 2.3 |
| fetal fibroblast | 2.4 |
| venom gland-2 | 4.8 |
| Brain-2 | 2.3 |
| Spleen | 2.8 |
| Lung | 3.6 |
| Liver | 4.0 |
| Kidney | 2.7 |
| Pancreas | 2.6 |
| Small intestine | 2.1 |
| Large intestine | 2.1 |
| Stomach | 2.9 |
| heart | 3.6 |
| ovary | 13.5 |
| cheek muscle | 4.0 |
Transcript
| Transcript ID | habu1_s5195_g15353.t1 |
|---|---|
| Definition | - |
>habu1_s5195_g15353.t1 gctctttttacctctaagggggggcggggggaagcaagatggcggaactagggaaaaagtattgcgtgtactgcttggct gaggtcagctcgcttcgttttcgctgcaccgaatgtaccgacatcgagctttgccccgaatgcttctcagcgggcgccga gattggcccgcataggcgctggcatggctaccagctggtagatggtgggcgtttcactctctggggggccgaggccgagg gtggctggagcagccgcgaggagcaactcttactggatgctatcgagcagttcggcttcggcaactgggaagatatggct actcatgttggagcatcacgaactcctcaagaagttatggagcactatgtgagcatgtatatacatggaaatcttggaaa agcctgcattcctgacattattcctaatagagtgactgatcatacatgcccaagtggtggtccactttctcctagcctta ccatgcctctgccacctttagatatatcagtggctgaacaacaacaacttggatacatgccacttcgagatgattatgag attgagtatgatcaagatgctgagaccctaattagtggcctttcagttaattatgatgatgatgatgtagaaatagaatt aaaaagagctcatgtggatatgtatgtaagaaaactgaaagagaggcaacggcgaaagaacattgctcgtgactacaact tggttcctgcatttttgggcaaggataggagagataaagaaaaaccttcaaaacgcaaaactacaaaagaagaaaaggaa ctgaggttaaaactgaggtctctttaccagtttatgtcttgcaaagaatttgatgatttctttgaaaatctgcacaagga aaaggttcttcgaacaaaaataagagaactccagcgttatcgccgaaatggcataacaaaaatggaagaatctgcagaat atgaagcagctagacataaacgagagaaaaggaaagaaaataaaaatattggtacttctaaaagaggaaaggaggagggt aaagacggagaattctctgcaattgaaaatcttcctgactttgaactcttatctgaccgagaaaaactgcagtctgcaaa aatgaaagtttccaggaacaacaaagccttatctatgtccaggcttcgtgtcaaattttctttaagcataataaattgta atgccaaagttcaccactagaggttgttaacatccatcttccaacttttaagtccaaacttatttcaccaactttccaaa tatcttttccaaaaagaagtcttaaaaatacttttaatccccaaatttgtcaaagttatgtctctatattaaatccaaat taatcttgtggtttt |
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Protein
| Protein ID | habu1_s5195_g15353.t1 |
|---|---|
| Definition | - |
>habu1_s5195_g15353.t1 MAELGKKYCVYCLAEVSSLRFRCTECTDIELCPECFSAGAEIGPHRRWHGYQLVDGGRFTLWGAEAEGGWSSREEQLLLD AIEQFGFGNWEDMATHVGASRTPQEVMEHYVSMYIHGNLGKACIPDIIPNRVTDHTCPSGGPLSPSLTMPLPPLDISVAE QQQLGYMPLRDDYEIEYDQDAETLISGLSVNYDDDDVEIELKRAHVDMYVRKLKERQRRKNIARDYNLVPAFLGKDRRDK EKPSKRKTTKEEKELRLKLRSLYQFMSCKEFDDFFENLHKEKVLRTKIRELQRYRRNGITKMEESAEYEAARHKREKRKE NKNIGTSKRGKEEGKDGEFSAIENLPDFELLSDREKLQSAKMKVSRNNKALSMSRLRVKFSLSIINCNAKVHH |
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