Gene
| Gene Model ID | habu1_s5195_g15357 |
|---|---|
| Locus | habu1_scaffold5195 : 498730 ... 531405 : + |
| To GenomeBrowser | habu1_scaffold5195:498730..531405 |
| Genes list of scaffold | habu1_scaffold5195 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| protein transport protein sec23a-like isoform x2 | GO:0006886 GO:0006888 GO:0008270 GO:0030127 GO:0048471 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s5195_g15357.t1 | 1 | 1 | zf-Sec23_Sec24 | 91 | 132 | 1.5e-14 | 53.2 | 1.1e-17 | 2.7e-14 | 52.4 |
| habu1_s5195_g15357.t1 | 1 | 1 | Sec23_trunk | 161 | 426 | 0.0 | 271.6 | 0.0 | 0.0 | 271.0 |
| habu1_s5195_g15357.t1 | 1 | 1 | Sec23_BS | 437 | 540 | 8.3e-31 | 106.3 | 8.0e-34 | 2.0e-30 | 105.1 |
| habu1_s5195_g15357.t1 | 1 | 1 | Sec23_helical | 555 | 655 | 1.1e-34 | 117.8 | 9.1e-38 | 2.3e-34 | 116.9 |
| habu1_s5195_g15357.t1 | 1 | 1 | Gelsolin | 668 | 754 | 1.9e-15 | 56.3 | 4.7e-18 | 1.2e-14 | 53.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s5195_g15357.t1 | gi|602651207|ref|XP_007431989.1| | PREDICTED: protein transport protein Sec23A-like isoform X1 [Python bivittatus] | 0.0 |
| habu1_s5195_g15357.t1 | gi|327270596|ref|XP_003220075.1| | PREDICTED: protein transport protein Sec23B [Anolis carolinensis] | 0.0 |
| habu1_s5195_g15357.t1 | gi|514713823|ref|XP_005012158.1| | PREDICTED: protein transport protein Sec23A-like isoform X2 [Anas platyrhynchos] | 0.0 |
| habu1_s5195_g15357.t1 | gi|729758438|ref|XP_010576085.1| | PREDICTED: protein transport protein Sec23B isoform X3 [Haliaeetus leucocephalus] | 0.0 |
| habu1_s5195_g15357.t1 | gi|686584987|ref|XP_009279805.1| | PREDICTED: protein transport protein Sec23B [Aptenodytes forsteri] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 11.2 |
| Venom grand-1 | 14.6 |
| Pit, infrared sensing | 10.9 |
| Nose | 17.0 |
| Brain-1 | 8.1 |
| Eye | 11.0 |
| fetal fibroblast | 35.6 |
| venom gland-2 | 72.7 |
| Brain-2 | 8.2 |
| Spleen | 9.3 |
| Lung | 6.1 |
| Liver | 4.7 |
| Kidney | 5.6 |
| Pancreas | 12.4 |
| Small intestine | 5.2 |
| Large intestine | 6.4 |
| Stomach | 6.3 |
| heart | 2.2 |
| ovary | 8.0 |
| cheek muscle | 2.0 |
Transcript
| Transcript ID | habu1_s5195_g15357.t1 |
|---|---|
| Definition | - |
>habu1_s5195_g15357.t1 cgccaagcaaggctgtccgccattttttttgtccgccatttttttccccttttccggcgggtgccttacctcccttgggc tgggccagctggtggtcagcctgctccgtctctgccgcttgccagctacgccttggccggcgcagggggcagaaccacgc atgcgcggcgctcccgggcagggaaagtcctcgacttacgaccagtttagtcctcgaccctctcagctgttgctaagaga tggagatcaagatgccagttctatggcgacttacctagaatttatccagcaaaatgaagagcgtgatggagttcgcttca gttggaatgtatggccttccagcaaattggaggccaccagaatggttgttccattggcttgtcttctaacacctctgaaa gaacggttagatctgccccctgtccagtacgagcctgttctatgcagtagaccaacctgcaaaactgttctcaatccact ttgtcaagttgattaccgagccaagctttgggcttgtaacttctgctttcagaggaaccagtttcctccagcatacgcag gcatatctgaagtgaatcagccagcagaactaatgccgcaattttctacaatagaatatatagtccagcgtggccctcag acacccctggtctttctttatgtagtggacacatgtttggaagaggaggacttacaagctttgaaagaatccttgcaaat gtctttaagtctgctccctcctgatgctcttgtgggcttgattaccttcggtcgaatggttcaagttcatgaattgagct gtgaagggatctccaaaagttatgtttttagaggaactaaagatctgtcagcgaaacaaatacaggatatgttgggcctt tcaaggcctgccgtacctacccagcaagggagaccacctcagtcccaagaatcgcctcacctttctagcagatttttgca gcctgttcacaaaattgacatgaacatgacagatcttctaggagaactacaaagagatccttggccagttactcagggaa agagaccgttgcgatccactggagtagctttgtcaattgctgttggactactagagggatcatttccaaatactgggact agaataatgttgtttactggagggccaccaactcaagggccaggcatggtggtaggagatgaactgaaaactccaattcg ttcgtggcatgatatagagaaagacaatgcacgattcatgaagaaagctatgaaacattatgaggcattgtctaatcgtg ctgctgctaatggacactgcattgatatttatgcatgtgctcttgatcagactggtcttctggagatgaagtgttgtaca aatataactgggggttatatggtgatgggagattcttttaatacttctctcttcaagcaaaccttccagagagtgtttaa caaaaatctcagtggagaattccgaatggcttttggagcaactctagaagtgaaaacttgtagagaactgaagatagctg gagctattggaccatgtgtatccttaaatgccaaagggccaagtgtttctgaaaatgagcttgggataggtggcacatac caatggaaaatttgtggtcttgaccccaccatgactcttgccatttaccttgaagtagtaaatcagcacagcactccaat acctcagggtggaagaggagctatccagtttgttacgcattatcagcattccagtacacagaggcgcattcgtgtgacta ctgttgctagaaattgggcagatgcacagagtcagttgcagcacattgaagctgcatttgaccaagaagcagctgctgtc ctgatggctcgattgggtgtctacagagctgagtcagaggaagggcctgatgtcttgcgatggctggataggcaactaat tagactttgtcagaagtttggacaatacagcaaagatgatccaaattcttttaggctgtctgattcattctccttgtatc cccagttcatgttccacttgcgacgatctccattccttcaagtattcaataacagtccagatgaatcttcctattaccgc catcactttgccaggcaggatttgacccagtctcttattatgattcagccaatactttattcttactcattctatggacc acctgagcctgtgctattggatagcagcagcattcttgctgataggattctgctgatggatacttttttccagattgtta tctatcttggtgagactattgcccagtggcgtaaggctggttatcaagatattccagaatatgaaaacttcaagcattta ctgcaggctcctctggatgatgctcaagaaatcttgcagacaagattcccaatgccacgctatgttaacacagaacatgg aagcagccaggcacggtttctcctatctaaagtgaatccttctcagacgcataataatctgtatacatgggggggacaag aatctggtgctccaatactaacagatgatgttagtctacaagtattcatggatcatctaaaaaagctggctgtatcaagc gcatcctaattttgatactaaagtcttaaaaatcaataattgtattaaatcatgctgttgatagactacagtctaccaag aaactaataacattcctttcatttttttaaatcaaagttttaattagcccatataaaaagggaaaatttacattttagat ttaacttattgatatacttgtctttattctgcaaattcttcattttcatgttcttataccaagattataatctgcattta tactgtcctgcatagttcatttttctgctcttacaactaagcaaaataaaatttgaaaataatgttaatcct |
|
Protein
| Protein ID | habu1_s5195_g15357.t1 |
|---|---|
| Definition | - |
>habu1_s5195_g15357.t1 MRGAPGQGKSSTYDQFSPRPSQLLLRDGDQDASSMATYLEFIQQNEERDGVRFSWNVWPSSKLEATRMVVPLACLLTPLK ERLDLPPVQYEPVLCSRPTCKTVLNPLCQVDYRAKLWACNFCFQRNQFPPAYAGISEVNQPAELMPQFSTIEYIVQRGPQ TPLVFLYVVDTCLEEEDLQALKESLQMSLSLLPPDALVGLITFGRMVQVHELSCEGISKSYVFRGTKDLSAKQIQDMLGL SRPAVPTQQGRPPQSQESPHLSSRFLQPVHKIDMNMTDLLGELQRDPWPVTQGKRPLRSTGVALSIAVGLLEGSFPNTGT RIMLFTGGPPTQGPGMVVGDELKTPIRSWHDIEKDNARFMKKAMKHYEALSNRAAANGHCIDIYACALDQTGLLEMKCCT NITGGYMVMGDSFNTSLFKQTFQRVFNKNLSGEFRMAFGATLEVKTCRELKIAGAIGPCVSLNAKGPSVSENELGIGGTY QWKICGLDPTMTLAIYLEVVNQHSTPIPQGGRGAIQFVTHYQHSSTQRRIRVTTVARNWADAQSQLQHIEAAFDQEAAAV LMARLGVYRAESEEGPDVLRWLDRQLIRLCQKFGQYSKDDPNSFRLSDSFSLYPQFMFHLRRSPFLQVFNNSPDESSYYR HHFARQDLTQSLIMIQPILYSYSFYGPPEPVLLDSSSILADRILLMDTFFQIVIYLGETIAQWRKAGYQDIPEYENFKHL LQAPLDDAQEILQTRFPMPRYVNTEHGSSQARFLLSKVNPSQTHNNLYTWGGQESGAPILTDDVSLQVFMDHLKKLAVSS AS |
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