Gene
| Gene Model ID | habu1_s5195_g15361 |
|---|---|
| Locus | habu1_scaffold5195 : 620430 ... 779233 : + |
| To GenomeBrowser | habu1_scaffold5195:620430..779233 |
| Genes list of scaffold | habu1_scaffold5195 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| sodium potassium calcium exchanger 3 isoform x1 | GO:0005886 GO:0008273 GO:0016021 GO:0035725 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s5195_g15361.t2 | 2 | 1 | Na_Ca_ex | 129 | 259 | 0.0 | 180.3 | 2.9e-32 | 4.3e-29 | 100.9 |
| habu1_s5195_g15361.t2 | 2 | 2 | Na_Ca_ex | 495 | 634 | 0.0 | 180.3 | 2.2e-27 | 3.3e-24 | 85.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s5195_g15361.t2 | gi|602640060|ref|XP_007426847.1| | PREDICTED: sodium/potassium/calcium exchanger 3 isoform X2 [Python bivittatus] | 0.0 |
| habu1_s5195_g15361.t2 | gi|697842248|ref|XP_009641474.1| | PREDICTED: sodium/potassium/calcium exchanger 3 [Egretta garzetta] | 0.0 |
| habu1_s5195_g15361.t2 | gi|529430624|ref|XP_005235117.1| | PREDICTED: sodium/potassium/calcium exchanger 3 [Falco peregrinus] | 0.0 |
| habu1_s5195_g15361.t2 | gi|514759061|ref|XP_005022692.1| | PREDICTED: sodium/potassium/calcium exchanger 3-like [Anas platyrhynchos] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.1 |
| Venom grand-1 | 0.2 |
| Pit, infrared sensing | 0.7 |
| Nose | 0.8 |
| Brain-1 | 6.5 |
| Eye | 0.8 |
| fetal fibroblast | 2.1 |
| venom gland-2 | 0.2 |
| Brain-2 | 4.8 |
| Spleen | 0.0 |
| Lung | 0.8 |
| Liver | 0.1 |
| Kidney | 0.3 |
| Pancreas | 0.0 |
| Small intestine | 0.2 |
| Large intestine | 0.4 |
| Stomach | 0.1 |
| heart | 0.1 |
| ovary | 0.2 |
| cheek muscle | 0.1 |
Transcript
| Transcript ID | habu1_s5195_g15361.t1 |
|---|---|
| Definition | - |
>habu1_s5195_g15361.t1 tctgctctgcaccgcgccgtccgttgagatgctgccgccgaagaggggccaagcttggcggcgcaggaaggggctgcgcg cggggcagctgtgcgtcctggcctcgctgctggggctcctgctgctcgcctgcgcccgggcaggccggcgggctggccgc tcagacgccgcagccgtttacgaatctctgaactttgatttggagactagtgacaaatggctgggaagaagactactgca agaaactgaggataatgtcactgataaaccagaagaagtaaaacatctctatcggaaaaattgcactgaaccagctctcc gtgaattccctgatgacatctttacgaatgaagatcggcggcatggagcagtaattttgcatgctttctgtgctgtctac atgttctatgctttggctattatctgtgatgatttctttgttccttcattggaaaaaatttgtgaacgcttgcacctcag tgaagatgtggcaggggcaacattcatggcagctggcagttctgctccagagctgtttacatctgtgataggtgtgttta tcacaaaaggagatgtaggtgttggaaccattgttggctctgcagtgttcaacatcctgtgcataattggggtttgtggc ctatttgcaggacagatagttgcattgtcttcttggagcctcttgagagattcaggatattatacctgctcagttgctgc acttattttgtttatttatgatgaaaaagttgcttggtgggagtccttaatcctagtgctgatgtacttcatatacattc ttatcatgaagtttaattccagtcttcagcatatgtttgaacggaggacaaagaatgtaacaaatatggtgaatggatta gcaaataataccgagatggatgacaacagcaattgtgatgctacagtagtattactaaagaaaggtaactgttccagaaa tttccaccgcaaagcctctgtaatcatggtggatgagttgctgtctgcatatccacaccagctatccttttcagaggctg gactccggattatgatcacaagtcactttcctcccagaacccggctctccatggctagtcgcatgttgatcaatgagagg caaagattaatcaacagccgagtgtacaccaatggagaatcagagatagccatcaaggtccctttcaaacataccatgga gaatggatcagggctcagcaactctgctaaaggaagcacaaatggaaccgggagagacgaggaggctgctgagggtggca gtgaaacagagaatgaaaatgatgacaatgaaaacaatgagaatgatgaggaggaagatgatgacgatgatgatgatgat gaccaaggtccatacactccctttgatccgccatctgggataatagaaattatcaagtggctcttcacctggcctctgtc tttgctcttatacttcacggtgcccaactgtagcaaaccctactgggagaagtggttcttggtcacttttgcttcctcta cgctctggattgcagccttttcctatgtgatggtctggatggtcacaatcattggtttcactttgggtattccagatgtg ataatggggatcacatttctggcagctggaaccagtgtaccagattgcatggcaagccttattgtggcacgacaaggaat gggtgacatggccgtttctaactccatcggaagcaatgtctttgatattctagttggccttggccttccatggtctctac agactctagcagtaaactatggctctgttattcgattgaatagtcgtggacttatctattctgtgggcttgttgctagct tcagtttttgtcacggtgtttggagttcatttgaacaagtggaagttagataagaagctggggtttgtgtgcctttccct ctatggaatcttcttgtgtttctccatcatgacagaatttaatgtcttcacttttgtaaatttgcctatgtgcaaagatc attgatcctatggacagtctgttgagaggcaacttccttctgtaccagtgcaatatgaaaacagttgacatttccaagca gtatgaggtcccctatgaaggctgtgaagttcagtggggcctcttcttatcttggcttagtctctttctaagccatcttt tgacacatacaaacgctcacctggaaaccacctatattgatgtgaagatttacaaattcagaagctctgatgggcaaact aacttttacctggccctgagccagagaaactgaactattacagtttttttaagttatttgatggaagactaatttatgaa ttgagactatagctaagatacaaagaagagggtacattgcattgactgcttttggagaaaaatgaaaggaatttatttta ttcttctttcctaagaaagtttccttgcaacttatctactttgtggaatactgcatctcattggatgattccgatgtcat aaacagtgctgtgagaactgaattc |
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| Transcript ID | habu1_s5195_g15361.t2 |
| Definition | - |
>habu1_s5195_g15361.t2 tctgctctgcaccgcgccgtccgttgagatgctgccgccgaagaggggccaagcttggcggcgcaggaaggggctgcgcg cggggcagctgtgcgtcctggcctcgctgctggggctcctgctgctcgcctgcgcccgggcaggccggcgggctggccgc tcagacgccgcagccgtttacgaatctctgaactttgatttggagactagtgacaaatggctgggaagaagactactgca agaaactgaggataatgtcactgataaaccagaagaagtaaaacatctctatcggaaaaattgcactgaaccagctctcc gtgaattccctgatgacatctttacgaatgaagatcggcggcatggagcagtaattttgcatgctttctgtgctgtctac atgttctatgctttggctattatctgtgatgatttctttgttccttcattggaaaaaatttgtgaacgcttgcacctcag tgaagatgtggcaggggcaacattcatggcagctggcagttctgctccagagctgtttacatctgtgataggtgtgttta tcacaaaaggagatgtaggtgttggaaccattgttggctctgcagtgttcaacatcctgtgcataattggggtttgtggc ctatttgcaggacagatagttgcattgtcttcttggagcctcttgagagattcaggatattatacctgctcagttgctgc acttattttgtttatttatgatgaaaaagttgcttggtgggagtccttaatcctagtgctgatgtacttcatatacattc ttatcatgaagtttaattccagtcttcagcatatgtttgaacggaggacaaagaatgtaacaaatatggtgaatggatta gcaaataataccgagatggatgacaacagcaattgtgatgctacagtagtattactaaagaaaggaaatttccaccgcaa agcctctgtaatcatggtggatgagttgctgtctgcatatccacaccagctatccttttcagaggctggactccggatta tgatcacaagtcactttcctcccagaacccggctctccatggctagtcgcatgttgatcaatgagaggcaaagattaatc aacagccgagtgtacaccaatggagaatcagagatagccatcaaggtccctttcaaacataccatggagaatggatcagg gctcagcaactctgctaaaggaagcacaaatggaaccgggagagacgaggaggctgctgagggtggcagtgaaacagaga atgaaaatgatgacaatgaaaacaatgagaatgatgaggaggaagatgatgacgatgatgatgatgatgaccaaggtcca tacactccctttgatccgccatctgggataatagaaattatcaagtggctcttcacctggcctctgtctttgctcttata cttcacggtgcccaactgtagcaaaccctactgggagaagtggttcttggtcacttttgcttcctctacgctctggattg cagccttttcctatgtgatggtctggatggtcacaatcattggtttcactttgggtattccagatgtgataatggggatc acatttctggcagctggaaccagtgtaccagattgcatggcaagccttattgtggcacgacaaggaatgggtgacatggc cgtttctaactccatcggaagcaatgtctttgatattctagttggccttggccttccatggtctctacagactctagcag taaactatggctctgttattcgattgaatagtcgtggacttatctattctgtgggcttgttgctagcttcagtttttgtc acggtgtttggagttcatttgaacaagtggaagttagataagaagctggggtttgtgtgcctttccctctatggaatctt cttgtgtttctccatcatgacagaatttaatgtcttcacttttgtaaatttgcctatgtgcaaagatcattgatcctatg gacagtctgttgagaggcaacttccttctgtaccagtgcaatatgaaaacagttgacatttccaagcagtatgaggtccc ctatgaaggctgtgaagttcagtggggcctcttcttatcttggcttagtctctttctaagccatcttttgacacatacaa acgctcacctggaaaccacctatattgatgtgaagatttacaaattcagaagctctgatgggcaaactaacttttacctg gccctgagccagagaaactgaactattacagtttttttaagttatttgatggaagactaatttatgaattgagactatag ctaagatacaaagaagagggtacattgcattgactgcttttggagaaaaatgaaaggaatttattttattcttctttcct aagaaagtttccttgcaacttatctactttgtggaatactgcatctcattggatgattccgatgtcataaacagtgctgt gagaactgaattc |
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Protein
| Protein ID | habu1_s5195_g15361.t1 |
|---|---|
| Definition | - |
>habu1_s5195_g15361.t1 MLPPKRGQAWRRRKGLRAGQLCVLASLLGLLLLACARAGRRAGRSDAAAVYESLNFDLETSDKWLGRRLLQETEDNVTDK PEEVKHLYRKNCTEPALREFPDDIFTNEDRRHGAVILHAFCAVYMFYALAIICDDFFVPSLEKICERLHLSEDVAGATFM AAGSSAPELFTSVIGVFITKGDVGVGTIVGSAVFNILCIIGVCGLFAGQIVALSSWSLLRDSGYYTCSVAALILFIYDEK VAWWESLILVLMYFIYILIMKFNSSLQHMFERRTKNVTNMVNGLANNTEMDDNSNCDATVVLLKKGNCSRNFHRKASVIM VDELLSAYPHQLSFSEAGLRIMITSHFPPRTRLSMASRMLINERQRLINSRVYTNGESEIAIKVPFKHTMENGSGLSNSA KGSTNGTGRDEEAAEGGSETENENDDNENNENDEEEDDDDDDDDDQGPYTPFDPPSGIIEIIKWLFTWPLSLLLYFTVPN CSKPYWEKWFLVTFASSTLWIAAFSYVMVWMVTIIGFTLGIPDVIMGITFLAAGTSVPDCMASLIVARQGMGDMAVSNSI GSNVFDILVGLGLPWSLQTLAVNYGSVIRLNSRGLIYSVGLLLASVFVTVFGVHLNKWKLDKKLGFVCLSLYGIFLCFSI MTEFNVFTFVNLPMCKDH |
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| Protein ID | habu1_s5195_g15361.t2 |
| Definition | - |
>habu1_s5195_g15361.t2 MLPPKRGQAWRRRKGLRAGQLCVLASLLGLLLLACARAGRRAGRSDAAAVYESLNFDLETSDKWLGRRLLQETEDNVTDK PEEVKHLYRKNCTEPALREFPDDIFTNEDRRHGAVILHAFCAVYMFYALAIICDDFFVPSLEKICERLHLSEDVAGATFM AAGSSAPELFTSVIGVFITKGDVGVGTIVGSAVFNILCIIGVCGLFAGQIVALSSWSLLRDSGYYTCSVAALILFIYDEK VAWWESLILVLMYFIYILIMKFNSSLQHMFERRTKNVTNMVNGLANNTEMDDNSNCDATVVLLKKGNFHRKASVIMVDEL LSAYPHQLSFSEAGLRIMITSHFPPRTRLSMASRMLINERQRLINSRVYTNGESEIAIKVPFKHTMENGSGLSNSAKGST NGTGRDEEAAEGGSETENENDDNENNENDEEEDDDDDDDDDQGPYTPFDPPSGIIEIIKWLFTWPLSLLLYFTVPNCSKP YWEKWFLVTFASSTLWIAAFSYVMVWMVTIIGFTLGIPDVIMGITFLAAGTSVPDCMASLIVARQGMGDMAVSNSIGSNV FDILVGLGLPWSLQTLAVNYGSVIRLNSRGLIYSVGLLLASVFVTVFGVHLNKWKLDKKLGFVCLSLYGIFLCFSIMTEF NVFTFVNLPMCKDH |
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