Gene
| Gene Model ID | habu1_s5195_g15362 |
|---|---|
| Locus | habu1_scaffold5195 : 829480 ... 868907 : + |
| To GenomeBrowser | habu1_scaffold5195:829480..868907 |
| Genes list of scaffold | habu1_scaffold5195 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ras and rab interactor 2 | GO:0007165 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s5195_g15362.t1 | 1 | 1 | VPS9 | 612 | 712 | 5.5e-24 | 84.1 | 3.5e-27 | 1.3e-23 | 82.9 |
| habu1_s5195_g15362.t1 | 1 | 1 | RA | 748 | 831 | 1.7e-12 | 47.6 | 1.1e-15 | 4.0e-12 | 46.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s5195_g15362.t1 | gi|602640056|ref|XP_007426845.1| | PREDICTED: ras and Rab interactor 2 [Python bivittatus] | 0.0 |
| habu1_s5195_g15362.t1 | gi|637292140|ref|XP_008107291.1| | PREDICTED: ras and Rab interactor 2 [Anolis carolinensis] | 0.0 |
| habu1_s5195_g15362.t1 | gi|564253925|ref|XP_006265959.1| | PREDICTED: ras and Rab interactor 2 [Alligator mississippiensis] | 0.0 |
| habu1_s5195_g15362.t1 | gi|557259605|ref|XP_006015477.1| | PREDICTED: LOW QUALITY PROTEIN: ras and Rab interactor 2 [Alligator sinensis] | 0.0 |
| habu1_s5195_g15362.t1 | gi|641752683|ref|XP_008172190.1| | PREDICTED: ras and Rab interactor 2 isoform X1 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 11.1 |
| Venom grand-1 | 7.5 |
| Pit, infrared sensing | 7.3 |
| Nose | 7.9 |
| Brain-1 | 3.8 |
| Eye | 4.5 |
| fetal fibroblast | 4.7 |
| venom gland-2 | 2.9 |
| Brain-2 | 2.7 |
| Spleen | 2.5 |
| Lung | 18.8 |
| Liver | 1.7 |
| Kidney | 6.7 |
| Pancreas | 2.0 |
| Small intestine | 26.7 |
| Large intestine | 6.2 |
| Stomach | 8.5 |
| heart | 4.6 |
| ovary | 2.3 |
| cheek muscle | 4.7 |
Transcript
| Transcript ID | habu1_s5195_g15362.t1 |
|---|---|
| Definition | - |
>habu1_s5195_g15362.t1 cgctggacgcaccagtttaccaagatggagctataacaggactggatgaatgaatctttattacagccaagggccaaaca taaaagcctagacaaagatatgggtgatgtgtgcccggatcagaaagattttgcaaatatcatacgagattctggatatg atagtctccccaataagctcagcattctagataaacttcttcatacccaccctatctggctacagcttggcttaaatgat gctgaagcagtggaaattctacgctctcaacctcctggaacgtttcttgttagaaagtcctcaagaatgcagaagaaagt cctgtctttacgcctaccaaatgatgtaaagggattttgccttaaagagtttgcaataaaagaaagcatctatacttttt ctttggaaggctctggaataagctttgctgatttattcaggctcatagctttctactgtattagcagggatgtcctgcca tttaccttgaagttacctcaggcaattgcagcagcaacaacagaacctgaacttgaagaggctgctcagctgggattgaa tttttggagctctccagctaacaacaaactgcaaaactcttcatccctccagaagcctctgccttcagacagcatttata atagctcccagcagctctgcctcataaatggagttcattctataagaaccagaacgccttcagagctggaatgcagccag accaacggagccctgtgttttattaatcctctcttcttgaaagtgcacagccaggatgttggtggaaatctgaaaagatc cagtccaaaaccacaagatacgaatggccctgagagatcctgttctcccccacccaggcctcccccaccttctattcata gccttcttgcacaccctcagctgtccaggactacaaaccaggccagtctgccagaaactgccagtcccagcaaacactcc aacttggatgtgatacccaagaggccaactcctatcccaccgcctcgcctgaaaaaaaaggctctctccttagaagcaca gagcaatgcaaagaactcagcagtaaatgaacccagccacaatttggtggacggcacggaaactgccagcattccaggtc gagctccgcctcagcagaacttggagagcaagaacagcttagctacacaccgtgagtcacaagtgcagtggaatggaggc agtcaaagactaagcaacatgagcctctccacatcctcctctgactctctggattttgatcggagcatgccactctttgc ttacgacggggataccaacagcagcctggaggagttcgagggggaaagtgaccaggagagcatggcaccacctttgaagc ccaagaaaaaaaggaatggttcatttgtgcttcccaaaattgtcaaatcgcagctgaggaaaatgagtggcgtcttcagt tccttcatgacccccgagaaaaggatggttaagaaaatagcagaaatgtctcgagacaagcgtacctattttggatgcct agttcaggactatataagctttctgcaggagaacaaggagtgtcatgtttccagcacagacatgcttcaaactattcggc agttcatgacccaagtaaagagctatttatctcagagttctgaactggatcctcccattgaatctctgattccggaagac caaatagatgtggtgttagagaaggccatgcataaatgcatcttgaaacccctcaaggaccacgtcgagatgatgttgaa agaatttcatacagctgatggctcatggaagcagttgaaagagaatcttcaacttgtccgacagcgaaaccctcaggaac tgggtgttttcgttccaacaccagatttcgtagatgttgaaaagattaaagttaaattcatggcaatgcagaaaatgtac tctcctgaaaagaaagttatgttgctactaagagtgtgcaaactgatttacactgtgatggaaaacaattcagggagaat gtatggggctgatgactttttgccagtgttgacctatgttgtggctcagtgtgacatgctggagttagatgctgaaattg agtacatgatggaactgctggacccatccttgttgcatggagaaggaggctactatttgacaagtgcatatggagcactg tccttaattaaaaatttccaagaagagcaagcagccagactgttgtgttcggaggccagaaatactctcaggcagtggca taagcggagaacaacaaacagaacaatcccatctgttgacgattttcagaactacctacgagttgcatttcaggaaatca acagtggctgcacaggaaaaacattgctagtgaggccatatattacaacagacgatgtttgccagctctgtgctgagaag tttaaagtggataatcctgagaactttagcctgtttctttttattgatgacacttggcagcaactgacagaagataccta tccccaaaaaatcaaagctgaactgcacagtcggccacagcctcagatggcgagtctgggactattgggaaacgaaacgg agagataccttgagaatggcactaagtcactaagttcccaaaacaacctagtacctatggattggctgaatttcaaacag acggttggacactgggaggaggagacctgaataggctttttgatgtaacctttcgtgcccaaactctttagaccttgatt tgccttcctgctatcactaactctcaataaaagttcattttgaaacgatgcct |
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Protein
| Protein ID | habu1_s5195_g15362.t1 |
|---|---|
| Definition | - |
>habu1_s5195_g15362.t1 MNESLLQPRAKHKSLDKDMGDVCPDQKDFANIIRDSGYDSLPNKLSILDKLLHTHPIWLQLGLNDAEAVEILRSQPPGTF LVRKSSRMQKKVLSLRLPNDVKGFCLKEFAIKESIYTFSLEGSGISFADLFRLIAFYCISRDVLPFTLKLPQAIAAATTE PELEEAAQLGLNFWSSPANNKLQNSSSLQKPLPSDSIYNSSQQLCLINGVHSIRTRTPSELECSQTNGALCFINPLFLKV HSQDVGGNLKRSSPKPQDTNGPERSCSPPPRPPPPSIHSLLAHPQLSRTTNQASLPETASPSKHSNLDVIPKRPTPIPPP RLKKKALSLEAQSNAKNSAVNEPSHNLVDGTETASIPGRAPPQQNLESKNSLATHRESQVQWNGGSQRLSNMSLSTSSSD SLDFDRSMPLFAYDGDTNSSLEEFEGESDQESMAPPLKPKKKRNGSFVLPKIVKSQLRKMSGVFSSFMTPEKRMVKKIAE MSRDKRTYFGCLVQDYISFLQENKECHVSSTDMLQTIRQFMTQVKSYLSQSSELDPPIESLIPEDQIDVVLEKAMHKCIL KPLKDHVEMMLKEFHTADGSWKQLKENLQLVRQRNPQELGVFVPTPDFVDVEKIKVKFMAMQKMYSPEKKVMLLLRVCKL IYTVMENNSGRMYGADDFLPVLTYVVAQCDMLELDAEIEYMMELLDPSLLHGEGGYYLTSAYGALSLIKNFQEEQAARLL CSEARNTLRQWHKRRTTNRTIPSVDDFQNYLRVAFQEINSGCTGKTLLVRPYITTDDVCQLCAEKFKVDNPENFSLFLFI DDTWQQLTEDTYPQKIKAELHSRPQPQMASLGLLGNETERYLENGTKSLSSQNNLVPMDWLNFKQTVGHWEEET |
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