Gene
| Gene Model ID | habu1_s5195_g15363 |
|---|---|
| Locus | habu1_scaffold5195 : 875322 ... 892769 : - |
| To GenomeBrowser | habu1_scaffold5195:875322..892769 |
| Genes list of scaffold | habu1_scaffold5195 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| crooked neck-like protein 1 | GO:0000245 GO:0044822 GO:0071013 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s5195_g15363.t1 | 2 | 1 | Suf | 83 | 215 | 9.0e-13 | 48.5 | 1.5e-08 | 1.5e-05 | 24.8 |
| habu1_s5195_g15363.t1 | 3 | 1 | HAT | 94 | 124 | 9.30042e-42 | 140.4 | 2.9e-11 | 2.8e-08 | 33.3 |
| habu1_s5195_g15363.t1 | 3 | 2 | HAT | 195 | 226 | 9.30042e-42 | 140.4 | 1.0e-23 | 1.0e-20 | 73.1 |
| habu1_s5195_g15363.t1 | 2 | 2 | Suf | 233 | 318 | 9.0e-13 | 48.5 | 8.6e-08 | 8.5e-05 | 22.4 |
| habu1_s5195_g15363.t1 | 1 | 1 | TPR_16 | 452 | 505 | 1.6e-14 | 54.1 | 6.8e-06 | 0.0067 | 17.0 |
| habu1_s5195_g15363.t1 | 3 | 3 | HAT | 458 | 488 | 9.30042e-42 | 140.4 | 2.6e-07 | 0.00026 | 20.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s5195_g15363.t1 | gi|602640054|ref|XP_007426844.1| | PREDICTED: crooked neck-like protein 1 [Python bivittatus] | 0.0 |
| habu1_s5195_g15363.t1 | gi|637292152|ref|XP_008107293.1| | PREDICTED: crooked neck-like protein 1 isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s5195_g15363.t1 | gi|719743996|ref|XP_010210617.1| | PREDICTED: crooked neck-like protein 1 [Tinamus guttatus] | 0.0 |
| habu1_s5195_g15363.t1 | gi|641752700|ref|XP_008172233.1| | PREDICTED: crooked neck-like protein 1 [Chrysemys picta bellii] | 0.0 |
| habu1_s5195_g15363.t1 | gi|564253919|ref|XP_006265956.1| | PREDICTED: crooked neck-like protein 1 [Alligator mississippiensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 7.9 |
| Venom grand-1 | 7.3 |
| Pit, infrared sensing | 8.6 |
| Nose | 9.9 |
| Brain-1 | 7.1 |
| Eye | 8.2 |
| fetal fibroblast | 15.9 |
| venom gland-2 | 11.9 |
| Brain-2 | 7.2 |
| Spleen | 9.1 |
| Lung | 9.8 |
| Liver | 12.3 |
| Kidney | 8.1 |
| Pancreas | 8.9 |
| Small intestine | 9.5 |
| Large intestine | 9.1 |
| Stomach | 8.7 |
| heart | 9.6 |
| ovary | 21.1 |
| cheek muscle | 11.3 |
Transcript
| Transcript ID | habu1_s5195_g15363.t1 |
|---|---|
| Definition | - |
>habu1_s5195_g15363.t1 gctgggaggtcaaagttcaaactgaagaggaggaggaggaggaggaaaaggcggcgtagactaatagaacgggcggaaag atggcgtccacggcggctgggaagcagcgaattcccaaagtggcaaaggtgaaaaataaagctccagcagaagtacagat aacagcagaacaattgttaagagaagcaaaggagagagaactcgagcttcttcccccacctcctcaacagaaaatcacag atgaagaggagctaaatgattacaagcttcggaaaagaaagacttttgaagataacataaggaaaaaccggactgttatt agtaattggatcaaatacgcacaatgggaagaaagcctcaaagaaatacaaagggctcgttccatctacgagcgtgctct agatgtggattaccgaaatgtaactctttggctgaagtatgccgaaatggaaatgaagaatcgtcaggttaatcatgcgc gaaatatctgggatcgggctatcactattttaccaagagttaatcagttctggtacaaatatacttacatggaagagatg ctggggaatgttgccggggcccgccaggtgtttgagcgttggatggaatggcagccagaggaacagtcgtggcattccta tattaactttgagctaagatacaaggaagtggatagagcacgttccatttatgagagatttgtcatggtccatcctgatg ttaagaattggatcaaatatgctcgttttgaagagaaacatagttattttgtacatgcaaggaaagtatttgaaagagct gtggaattctttggagaagaacatatgaatgaatatttgtatgttgcatttgccaaatttgaagagaaccagaaagagtt tgaacgggtgcgagtaatattcaaatatgccctggacagaattccaaaacatgaggcacaggagctcttcaaaaattata caatttttgagaagaaatttggggaccgaaggggaattgaggatattattgttagcaagaggagattccaatatgaagaa gaagtaaaagctaatccacataattatgatgcttggtttgactatctgcgtctggtggagagtgatgcagaatctgatac aatacgtgaagtttatgaaagagccattgccaacgttcctccaattcaagaaaaacgacactggaagaggtacatctatc tgtggatcaattatgcactttatgaagagctagaggcaaaggatccagagagaacaagacaggtgtatcaagcatgtgtt gaactcattcctcacaaaaagtttacatttgccaaaatatggttgctctacgcacagtttgaaattagacagaagcatct ccatcttgccaggcgagcattggggacatctataggtaaatgtccaaagaacaaactatttaaaggctatattgaattgg agctacaactgcgagagtttgatcgttgtcggaaactgtatgagaaatttttagaatttgcacctgaaaactgcacatca tggatcaaatttgccgagttagaaactattctaggtgacattgatcgagccagagctatatatgaactagctattggcca gcctcgattggatatgcccgaggtgctttggaaatcttacatagactttgaaattgaacaagaggaatatgagaatacaa gaaatttatacaggaggttgcttcagcgaacacagcatgttaaggtatggatcagttttgctcaatttgagctctcagca gataaaaggaacaatttaccacgatgccggcaaatatatgaagaggcaaataaaacaatgagaaattgtgaggagaaaga agagaggcttatgctcttggaatcttggaaaaactttgaagaggagtttggaacagaatccagcagagaacgagtagaca aactgatgcctgaaaaagtcaagaagcggagaaaacttcaggctgaagatgggtctgatgccggctgggaagaatattat gattatatcttcccagaagatgctgccaatcaacccaacctcaaactgcttgcaatggctaaactctggaagaaggagca acaggatgaaaatccagagacagacccagacaaggatattgatgaaagcagtccctaacaatatctttgatttcttctct tttatattgtacagatttttgctaataaactatttccccccaaaaattgct |
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Protein
| Protein ID | habu1_s5195_g15363.t1 |
|---|---|
| Definition | - |
>habu1_s5195_g15363.t1 MASTAAGKQRIPKVAKVKNKAPAEVQITAEQLLREAKERELELLPPPPQQKITDEEELNDYKLRKRKTFEDNIRKNRTVI SNWIKYAQWEESLKEIQRARSIYERALDVDYRNVTLWLKYAEMEMKNRQVNHARNIWDRAITILPRVNQFWYKYTYMEEM LGNVAGARQVFERWMEWQPEEQSWHSYINFELRYKEVDRARSIYERFVMVHPDVKNWIKYARFEEKHSYFVHARKVFERA VEFFGEEHMNEYLYVAFAKFEENQKEFERVRVIFKYALDRIPKHEAQELFKNYTIFEKKFGDRRGIEDIIVSKRRFQYEE EVKANPHNYDAWFDYLRLVESDAESDTIREVYERAIANVPPIQEKRHWKRYIYLWINYALYEELEAKDPERTRQVYQACV ELIPHKKFTFAKIWLLYAQFEIRQKHLHLARRALGTSIGKCPKNKLFKGYIELELQLREFDRCRKLYEKFLEFAPENCTS WIKFAELETILGDIDRARAIYELAIGQPRLDMPEVLWKSYIDFEIEQEEYENTRNLYRRLLQRTQHVKVWISFAQFELSA DKRNNLPRCRQIYEEANKTMRNCEEKEERLMLLESWKNFEEEFGTESSRERVDKLMPEKVKKRRKLQAEDGSDAGWEEYY DYIFPEDAANQPNLKLLAMAKLWKKEQQDENPETDPDKDIDESSP |
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